Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01222 ATGCTGAAGTACATCACGGAGATGCTGATGGACGAAGAGGAAGATCTCAAAACTAAGCCCTGTATGCTTATTGACTGTTTGGCTCTTCAAGCTGCTGAGAAATCTTTTTATGATGTTCTTGGTAAGAAGTATCCTCCTTCTCCAATCGGCCTTGGCGATTCTACTCAGAATTTTAGCTCTGATTTGGGTTTTTTTAAGGCTGAAGATGAATCTGAATCTTTTAGTGGAGATTCCTCTGTTTTTCCCCCTTCTGATAAACCTCTTTTGAGTCAAGATTCCTTGTTTGGGATGCAATATATTTTCCATTTTAGGCAAGGAGCTGTGGAGGCTAGCAAATTTCTTCCTGTTAATGGTAAATTTGGAACCATTGACTTGGATAATGATTCATCTGCTTCTGTTCCTTCTAGGGCTGTTGATTTTTCTTGGCTTGCTGCTGTGGGTGATGCTAGATCCACCCTTCCAAATGGGTTGTTTAGAGAAAAGAAGAATCATCAAAGGGAAGACAGTGATGAGGAGTTGAGAAGTACTAAACAATCTGCTACTTTTGCTGATGATAGTTCATTGTCTGAGTTGTTTGATGAACTCTTGCTATGTAGGGGTGAGAGCCGGCAGTCCCCATCATGGGGTTCGGACGAATCGTCGGAGAACGAATCGAGTAAGAAATCGAGAAAGAAAATGAAAGGTAAGAAGAATCGATCTAGGAAGCAAGAGAGTTGTGTGGAAGTTGTGGATTTATGGACATTGTTGATTCAATGTGCTCAAGCTGTTTCAAATTATGATCAGAGGACTGCTAATGAGCTGCTTAATCAAATCAGGCACCATTCTAATCCATCAGGGGATGGAAACCAAAGATTAGCTTATTTCTTTGCTAAAGGCCTCGAGACTCGGCTTGCGGCCGGGACGCCGCTGTATATGCCGTTTGCAAGCAATGAAACCTCTGCTGCTGATATCTTGAAAACTTATCAGATGTTCATCAAGGCATGCCCCTTTCGGCGGATGTCATATTTCTATGCCAATAGAACGATTCTGAAGCTAGCTGAGAATGTAACAAGGCTGCATATTGTTGATTTTGGTATATTATATGGTCTTCAATGGCCTTGCTTGATTCAGCGGCTCTCCAACAGACCTGGTGGACCTCCCAAGCTGAGAATCACAGGGATTGAGCTTCCTCAGCCACGCTTCCGCCCCGCTGAACGTGTCGAGCAGACTGGACGTCGCCTTGCACATTACTGCAAAAGATTCAATGTGCCATTTGAACACAAGGTCTTGGCTCAGAAATGGGAAACTGTCAAGTATGAGGATCTTAATGTCGATAGAGACGAACTGACTATTGTGACTTGTATGTTCCGAATGAAGAACGTACCCGACGAAACCGTCGTTGCAAACAGTCCAAGAGACAAGGTTCTGAAGTTGATCAGGAAAATCAACCCAGATCTGTTCATTCATGAAGTCACCAATGGTTCATTCAACACTCCATTCTTCAACACAAGGTTTAAGGAGGCACTCTTTTACTACTCATCGTTATTCGACATGTACGAGGCGACCGTGCCTCGAGATAATCCACAGAGGTATCTATGTGAAAGGGAAATCTTAGGAAGAGATATCATGAACGTTATAGCGTGCGAGGGGCTCGAAAGAGTCGAAAGGCCAGAAACATACAAGCAATGGCAAGTAAGGAACACTAGGGCCGGGTTCAAGCAAGTGCCATTAGACCAAGAACTGCTGAAGAATGTGGAGAAGATAGTGAACACAGAATACCATCAGGACTTTGCAGTGGATCAGGATGGAGCATGGATGTTACAAGGGTGGAAGGGACGGATCATCGACGGGTTGTCGTGTTGGGTAGTCGCGTAA 1854 44.01 MLKYITEMLMDEEEDLKTKPCMLIDCLALQAAEKSFYDVLGKKYPPSPIGLGDSTQNFSSDLGFFKAEDESESFSGDSSVFPPSDKPLLSQDSLFGMQYIFHFRQGAVEASKFLPVNGKFGTIDLDNDSSASVPSRAVDFSWLAAVGDARSTLPNGLFREKKNHQREDSDEELRSTKQSATFADDSSLSELFDELLLCRGESRQSPSWGSDESSENESSKKSRKKMKGKKNRSRKQESCVEVVDLWTLLIQCAQAVSNYDQRTANELLNQIRHHSNPSGDGNQRLAYFFAKGLETRLAAGTPLYMPFASNETSAADILKTYQMFIKACPFRRMSYFYANRTILKLAENVTRLHIVDFGILYGLQWPCLIQRLSNRPGGPPKLRITGIELPQPRFRPAERVEQTGRRLAHYCKRFNVPFEHKVLAQKWETVKYEDLNVDRDELTIVTCMFRMKNVPDETVVANSPRDKVLKLIRKINPDLFIHEVTNGSFNTPFFNTRFKEALFYYSSLFDMYEATVPRDNPQRYLCEREILGRDIMNVIACEGLERVERPETYKQWQVRNTRAGFKQVPLDQELLKNVEKIVNTEYHQDFAVDQDGAWMLQGWKGRIIDGLSCWVVA 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11052449 11054302 - Cp4.1LG02g13620.1 Cpe02g01222 465171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01222 617 MobiDBLite consensus disorder prediction 154 181 - -
Cpe02g01222 617 MobiDBLite consensus disorder prediction 155 178 - -
Cpe02g01222 617 Pfam GRAS domain family 247 614 IPR005202 -
Cpe02g01222 617 ProSiteProfiles GRAS family profile. 236 615 IPR005202 -
Cpe02g01222 617 PANTHER SCARECROW-LIKE PROTEIN 30 1 615 - -
Cpe02g01222 617 MobiDBLite consensus disorder prediction 202 233 - -
Cpe02g01222 617 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 615 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01222 Cpe-Chr2:11052449 Cpe08g01167 Cpe-Chr8:8658812 0 dispersed
Cpe16g00623 Cpe-Chr16:6751531 Cpe02g01222 Cpe-Chr2:11052449 0 wgd
Cpe02g01222 Cpe-Chr2:11052449 Cpe20g00829 Cpe-Chr20:7491328 0 wgd
Cpe02g01222 Cpe-Chr2:11052449 Cpe05g00928 Cpe-Chr5:6099157 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49072 PF03514 GRAS 2.90E-114 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01222 - - bhj:120083055 1029.24