Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01240 ATGGATTTCTCTTCTGTTCCACTCTATTTAGATCCTCCTCCCAATTGGCATCAGCAATCAAATCATCATCATCATCATCATCTTCAGATACCCAATAATGGATCTCCTCACCATCTGCAACCCTCATCCACTGCGCTGCCCTCTCATGTCGGTGCCACCGGGGTTGCCTCGATCCGCCGTGGTTCGATGGTCGACCGAGCTCGCCTAGCTAACATACCACTACCCGAGACTGCCCTCAAATGTCCTCGATGTGATTCCTCCAACACCAAGTTCTGTTACTTCAATAACTATAGCCTCTCTCAGCCTCGCCACTTTTGCAAGACCTGTCGTCGATACTGGACTCGTGGTGGCGCTCTTCGAAACGTTCCGGTTGGAGGCGGTTGTCGTCGGAATAAAAAGAATAAAAGTAGACGCTCGAAATCTCCGGCCACCGGGAACGAAACGAGTAACAATAACAATAACAATTCGAACTCACCCACCAATACAATTCCCTTGCATAGTAGCAACGCTGAGAATATTATTGGTCAGTTGCAGCCTCAGAATCCTCATCTTTCATTCATGGCTACGTTGAACAATTTCTCTCGTTATGGGACAGCCAATTTAGGGTTGAGTTTCAATGAGATCCAAACTCAAGCTGGAGACATCGGTAACAGCGCCCTTCTAAATCATCACTGGCGCAATTCCCAAAGCTTTCCTCTTTCAGCTGACCTAGAAACGCCGACAGCGTTGTACCCATTTCAAATTAGTGAAGGCGGCAACAACGCAACAAATTCAATTCTAAATCCAAATTCAAGAGCAACCCATTTGCCTCCAGTGAAGATTGAAGAAACCCAAGTGCTGAATTTGTTGAAATCATCAAATTTGGGTGTCAACAATTCGGACAATAATAATCAATTTTGGAACGGCGGAAATGGGTGGACAGATCTTTCGGCTATCAGTTCTTCGTCAAGTGGCCATATTTCTTGTGACTTCAATCATTGA 981 45.67 MDFSSVPLYLDPPPNWHQQSNHHHHHHLQIPNNGSPHHLQPSSTALPSHVGATGVASIRRGSMVDRARLANIPLPETALKCPRCDSSNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKSRRSKSPATGNETSNNNNNNSNSPTNTIPLHSSNAENIIGQLQPQNPHLSFMATLNNFSRYGTANLGLSFNEIQTQAGDIGNSALLNHHWRNSQSFPLSADLETPTALYPFQISEGGNNATNSILNPNSRATHLPPVKIEETQVLNLLKSSNLGVNNSDNNNQFWNGGNGWTDLSAISSSSSGHISCDFNH 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11148513 11150803 + Cp4.1LG02g13420.1 Cpe02g01240 465189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01240 326 MobiDBLite consensus disorder prediction 141 166 - -
Cpe02g01240 326 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 22 317 IPR045174 GO:0003700|GO:0006355
Cpe02g01240 326 Pfam Dof domain, zinc finger 78 133 IPR003851 GO:0003677|GO:0006355
Cpe02g01240 326 ProSiteProfiles Zinc finger Dof-type profile. 79 133 IPR003851 GO:0003677|GO:0006355
Cpe02g01240 326 ProSitePatterns Zinc finger Dof-type signature. 81 117 IPR003851 GO:0003677|GO:0006355
Cpe02g01240 326 MobiDBLite consensus disorder prediction 123 166 - -
Cpe02g01240 326 MobiDBLite consensus disorder prediction 33 49 - -
Cpe02g01240 326 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 22 317 - -
Cpe02g01240 326 MobiDBLite consensus disorder prediction 14 49 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01095 Cpe-Chr1:6475077 Cpe02g01240 Cpe-Chr2:11148513 3.78E-63 dispersed
Cpe01g02293 Cpe-Chr1:19379956 Cpe02g01240 Cpe-Chr2:11148513 6.61E-60 dispersed
Cpe02g01240 Cpe-Chr2:11148513 Cpe08g01160 Cpe-Chr8:8615889 1.62E-53 dispersed
Cpe19g00602 Cpe-Chr19:4969994 Cpe02g01240 Cpe-Chr2:11148513 2.70E-32 dispersed
Cpe01g00186 Cpe-Chr1:1055284 Cpe02g01240 Cpe-Chr2:11148513 1.12E-58 wgd
Cpe10g00881 Cpe-Chr10:4961166 Cpe02g01240 Cpe-Chr2:11148513 1.60E-46 wgd
Cpe16g00602 Cpe-Chr16:6669904 Cpe02g01240 Cpe-Chr2:11148513 1.33E-50 wgd
Cpe19g00362 Cpe-Chr19:3293086 Cpe02g01240 Cpe-Chr2:11148513 4.37E-31 wgd
Cpe02g01240 Cpe-Chr2:11148513 Cpe20g00813 Cpe-Chr20:7378828 4.16E-103 wgd
Cpe02g01240 Cpe-Chr2:11148513 Cpe05g00913 Cpe-Chr5:6006866 1.43E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49073 PF02701 zf-Dof 2.50E-32 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01240 - - csv:101218334 436.802