Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g01240 | ATGGATTTCTCTTCTGTTCCACTCTATTTAGATCCTCCTCCCAATTGGCATCAGCAATCAAATCATCATCATCATCATCATCTTCAGATACCCAATAATGGATCTCCTCACCATCTGCAACCCTCATCCACTGCGCTGCCCTCTCATGTCGGTGCCACCGGGGTTGCCTCGATCCGCCGTGGTTCGATGGTCGACCGAGCTCGCCTAGCTAACATACCACTACCCGAGACTGCCCTCAAATGTCCTCGATGTGATTCCTCCAACACCAAGTTCTGTTACTTCAATAACTATAGCCTCTCTCAGCCTCGCCACTTTTGCAAGACCTGTCGTCGATACTGGACTCGTGGTGGCGCTCTTCGAAACGTTCCGGTTGGAGGCGGTTGTCGTCGGAATAAAAAGAATAAAAGTAGACGCTCGAAATCTCCGGCCACCGGGAACGAAACGAGTAACAATAACAATAACAATTCGAACTCACCCACCAATACAATTCCCTTGCATAGTAGCAACGCTGAGAATATTATTGGTCAGTTGCAGCCTCAGAATCCTCATCTTTCATTCATGGCTACGTTGAACAATTTCTCTCGTTATGGGACAGCCAATTTAGGGTTGAGTTTCAATGAGATCCAAACTCAAGCTGGAGACATCGGTAACAGCGCCCTTCTAAATCATCACTGGCGCAATTCCCAAAGCTTTCCTCTTTCAGCTGACCTAGAAACGCCGACAGCGTTGTACCCATTTCAAATTAGTGAAGGCGGCAACAACGCAACAAATTCAATTCTAAATCCAAATTCAAGAGCAACCCATTTGCCTCCAGTGAAGATTGAAGAAACCCAAGTGCTGAATTTGTTGAAATCATCAAATTTGGGTGTCAACAATTCGGACAATAATAATCAATTTTGGAACGGCGGAAATGGGTGGACAGATCTTTCGGCTATCAGTTCTTCGTCAAGTGGCCATATTTCTTGTGACTTCAATCATTGA | 981 | 45.67 | MDFSSVPLYLDPPPNWHQQSNHHHHHHLQIPNNGSPHHLQPSSTALPSHVGATGVASIRRGSMVDRARLANIPLPETALKCPRCDSSNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKSRRSKSPATGNETSNNNNNNSNSPTNTIPLHSSNAENIIGQLQPQNPHLSFMATLNNFSRYGTANLGLSFNEIQTQAGDIGNSALLNHHWRNSQSFPLSADLETPTALYPFQISEGGNNATNSILNPNSRATHLPPVKIEETQVLNLLKSSNLGVNNSDNNNQFWNGGNGWTDLSAISSSSSGHISCDFNH | 326 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 11148513 | 11150803 | + | Cp4.1LG02g13420.1 | Cpe02g01240 | 465189 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g01240 | 326 | MobiDBLite | consensus disorder prediction | 141 | 166 | - | - | |
Cpe02g01240 | 326 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 22 | 317 | IPR045174 | GO:0003700|GO:0006355 | |
Cpe02g01240 | 326 | Pfam | Dof domain, zinc finger | 78 | 133 | IPR003851 | GO:0003677|GO:0006355 | |
Cpe02g01240 | 326 | ProSiteProfiles | Zinc finger Dof-type profile. | 79 | 133 | IPR003851 | GO:0003677|GO:0006355 | |
Cpe02g01240 | 326 | ProSitePatterns | Zinc finger Dof-type signature. | 81 | 117 | IPR003851 | GO:0003677|GO:0006355 | |
Cpe02g01240 | 326 | MobiDBLite | consensus disorder prediction | 123 | 166 | - | - | |
Cpe02g01240 | 326 | MobiDBLite | consensus disorder prediction | 33 | 49 | - | - | |
Cpe02g01240 | 326 | PANTHER | DOF DOMAIN ZINC FINGER PROTEIN | 22 | 317 | - | - | |
Cpe02g01240 | 326 | MobiDBLite | consensus disorder prediction | 14 | 49 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01095 | Cpe-Chr1:6475077 | Cpe02g01240 | Cpe-Chr2:11148513 | 3.78E-63 | dispersed | |
Cpe01g02293 | Cpe-Chr1:19379956 | Cpe02g01240 | Cpe-Chr2:11148513 | 6.61E-60 | dispersed | |
Cpe02g01240 | Cpe-Chr2:11148513 | Cpe08g01160 | Cpe-Chr8:8615889 | 1.62E-53 | dispersed | |
Cpe19g00602 | Cpe-Chr19:4969994 | Cpe02g01240 | Cpe-Chr2:11148513 | 2.70E-32 | dispersed | |
Cpe01g00186 | Cpe-Chr1:1055284 | Cpe02g01240 | Cpe-Chr2:11148513 | 1.12E-58 | wgd | |
Cpe10g00881 | Cpe-Chr10:4961166 | Cpe02g01240 | Cpe-Chr2:11148513 | 1.60E-46 | wgd | |
Cpe16g00602 | Cpe-Chr16:6669904 | Cpe02g01240 | Cpe-Chr2:11148513 | 1.33E-50 | wgd | |
Cpe19g00362 | Cpe-Chr19:3293086 | Cpe02g01240 | Cpe-Chr2:11148513 | 4.37E-31 | wgd | |
Cpe02g01240 | Cpe-Chr2:11148513 | Cpe20g00813 | Cpe-Chr20:7378828 | 4.16E-103 | wgd | |
Cpe02g01240 | Cpe-Chr2:11148513 | Cpe05g00913 | Cpe-Chr5:6006866 | 1.43E-47 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49073 | PF02701 | zf-Dof | 2.50E-32 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g01240 | - | - | csv:101218334 | 436.802 |