Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01252 ATGGGTGGAGACGGGGAAAACTATGGGAAAAAGGAACCTTTTGCTGCTAACATCTCGAATAACGAAACTTATCCTGCCTGGGCAACGGATGTTCGAGAATGCCTAGAGAAGTACCAAGTGAACCCTGATCTCGGATTATCTTCTGAGGAGGTTGAGAAACAGAGAAAGATCTACGGTTCCAATGAATTGGAGAAACATGAGGGTACATCAATCTTTAAACTAGTTTTGGAACAATTTAATGATACACTAGTTAGGATTCTATTAGCTGCAGCAGTTGTATCTTTTGTTCTTGCGTGGTATGATGGTGAGGAAGGAGGTGAGATGGAGATTACAGCATTTGTGGAGCCTTTAGTTATTTTCTTGATATTGATTGTCAATGCCATTGTTGGCATTTGGCAAGAGAACAATGCTGAGAAAGCATTGGAAGCTCTTAAAGAAATTCAGTCTGAACAGGCTTCAGTAATTCGAAATGGTAAACATGTTTCAATTGTTTCCAAGGACATTGTTCCTGGTGATATAGTAGAACTCAGAGTTGGGGATAAGGTGCCTGCTGACATGCGAGTGTTGCGGTTAATCAGCTCAACTTTTCGGGTTGAGCAGGGGTCCTTGACTGGTGAGAGCGAAGCGGTGAGCAAGACTGCTAAGGCTGTGCCAGAAGATACAGACATACAAGGGAAAAAGTGTATGGTTTTTGCAGGGACAACAGTTGTCAATGGAAATTGTATTTGCCTTGTTACCCAGACAGGGATGAGCACTGAACTAGGACAGGTCCATTCTCAGATACAAGAAGCATCCCAGGGTGAAGATGATACACCATTGAAGAAGAAGTTGAATGAGTTTGGGGAGCTTTTAACAGCAATAATTGGAGTGATCTGTGCTCTAGTTTGGCTTATTAATGTCAAATACTTCCTCACTTGGGAATATGTTGATGGGTGGCCGGCAAATTTCAAGTTCTCATTTGAGAAATGTACGTATTACTTCGAGATTGCCGTGGCATTGGCTGTAGCTGCAATTCCTGAAGGTTTGCCTGCAGTCATAACTACATGCTTGGCACTTGGCACTCGGAAAATGGCCCAAAAGAATGCTCTTGTTCGGAAGCTGCCCAGTGTTGAAACTCTTGGCTGTACAACTGTGATATGTTCTGATAAGACAGGTACTCTAACAACTAATCAGATGGCTGTAGCGAAAATTGTGGCTCTCGGTTCTCGTGTTGGTACTCTGCGAGCCTTTGATGTGGAAGGGACTACATATGATCCTTCAGATGGAAAAATAATTGGTTGGCTTGGAGGTCAACTGGATGCTAATCTGCAAATGTTGGCAAAGATTGCCGCTGTCTGTAATGATGCAGTTGTTCAAAAATCTGGTCATCATTTTGTTGTGAATGGAATGCCTACTGAAGCAGCATTGAAGGTTCTTGTGGAAAAGATGGGTCTTCCTGAAGGATATGACTCCACTTCAGCTTCCATTGGGGATGTCCTGCGATGCTGCGACGTTTGGAATAAGAACGAGCAACGCATTGCTACTCTAGAGTTTGACCGAGATCGTAAATCAATGGGAGTTATTACAAATTCTAGCTCAGGAAAGAAGTCATTACTCGTGAAGGGTGCTGTTGAAAATCTTTTGGAACGGAGTTCATTTATTCAACTTATTGATGGATCTATTGTGAAGTTGGACTCGGACTCAAAAACCCACCTCTTAAGTTACTTGCGTGAGATGTCATCAAGTGCATTAAGGTGTTTAGGTTTTGCATACAAGGAAGACCTTCCAGAATTTTCCACTTACAATAGTGGTGACGAAGAACATCCAGCACATCGGCTTTTACTTGACCCGTCCAATTACTCTAAAATTGAAAGTAATCTTATTTTTGCTGGCTTTGTTGGATTAAGGGATCCTCCCCGAAAAGAGGTTCATCAAGCAATCGAAGACTGTAAAGCTGCTGGTATTCGTGTCATGGTTATCACAGGGGACAACCAGAACACAGCCGAAGCTGTTGCTAAGGAAGCCTCCGACATGGTTCTGGCAGATGACAATTTTAGTACAATAGTTGCAGCAGTTGGTGAAGGCAGATCCATTTACGACAATATGAAGGCATTTATCAGGTACATGATTTCCTCAAACATCGGCGAGGTTGCGTCGATATTTTTGACAGCAGCACTGGGTATTCCCGAAGGGATGATCCCTGTTCAGCTTCTCTGGGTTAATCTCGTTACAGATGGACCTCCAGCTACTGCATTGGGATTTAATCCACCCGATACTGATATAATGAAGAAACCACCTAGAAGAAGTGATGACTCGTTGATCACGGCCTGGATTTTGTTCCGCTATTTGGTTATTGGACTTTACGTAGGGATAGCAACTGTAGGAGTATTTATTATTTGGTATACACATGCTTCCTTCATGGGCATTGACCTGTCCGGAGATGGTCACAGTCTGGTCTCGTACTCTCAGCTCGCAAACTGGGATCAGTGCCCGTCTTGGGAAGGGTTTACCGTGTCGCCTTTCATGGCTGGGGACCAAGTCTTCAGCTTCGATTCAGATCCATGCGACTACTTCCGTTCAGGCAAGATCAAGGCCTCAACTCTCTCACTCTCCGTTTTGGTCGCCATTGAGATGTTCAATTCTCTCAATGCCCTCTCAGAGGATGGAAGCTTGTTGACAATGCCCCCATGGGTTAACCCGTGGCTGCTCCTCGCCATGTCTGTTTCATTTGGCTTGCATTTCTTGATCCTCTATGTGCCATTCCTCGCGCAAATTTTCGGCATTGTCCCCCTCTCCTTGAATGAATGGCTCTTGGTTCTGGCCGTGGCATTGCCCGTGATCTTAATCGATGAGATTCTGAAATTCGTGGGAAGGCTTACAAGCGGGTTGAGGACATCTCGCCCGAGCAGCAGATTGTTGAAGCAGAAATCAGAATAA 2916 44.27 MGGDGENYGKKEPFAANISNNETYPAWATDVRECLEKYQVNPDLGLSSEEVEKQRKIYGSNELEKHEGTSIFKLVLEQFNDTLVRILLAAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQENNAEKALEALKEIQSEQASVIRNGKHVSIVSKDIVPGDIVELRVGDKVPADMRVLRLISSTFRVEQGSLTGESEAVSKTAKAVPEDTDIQGKKCMVFAGTTVVNGNCICLVTQTGMSTELGQVHSQIQEASQGEDDTPLKKKLNEFGELLTAIIGVICALVWLINVKYFLTWEYVDGWPANFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKIVALGSRVGTLRAFDVEGTTYDPSDGKIIGWLGGQLDANLQMLAKIAAVCNDAVVQKSGHHFVVNGMPTEAALKVLVEKMGLPEGYDSTSASIGDVLRCCDVWNKNEQRIATLEFDRDRKSMGVITNSSSGKKSLLVKGAVENLLERSSFIQLIDGSIVKLDSDSKTHLLSYLREMSSSALRCLGFAYKEDLPEFSTYNSGDEEHPAHRLLLDPSNYSKIESNLIFAGFVGLRDPPRKEVHQAIEDCKAAGIRVMVITGDNQNTAEAVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDTDIMKKPPRRSDDSLITAWILFRYLVIGLYVGIATVGVFIIWYTHASFMGIDLSGDGHSLVSYSQLANWDQCPSWEGFTVSPFMAGDQVFSFDSDPCDYFRSGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSLNEWLLVLAVALPVILIDEILKFVGRLTSGLRTSRPSSRLLKQKSE 971
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11276691 11282067 + Cp4.1LG02g13310.1 Cpe02g01252 465201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01252 971 Gene3D - 684 951 - -
Cpe02g01252 971 SMART Cation_ATPase_N_a_2 25 99 IPR004014 -
Cpe02g01252 971 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 664 963 - -
Cpe02g01252 971 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 9 664 - -
Cpe02g01252 971 PRINTS Sodium/potassium-transporting ATPase signature 373 394 - -
Cpe02g01252 971 PRINTS Sodium/potassium-transporting ATPase signature 767 788 - -
Cpe02g01252 971 SUPERFAMILY HAD-like 368 668 IPR036412 -
Cpe02g01252 971 Pfam Cation transport ATPase (P-type) 444 547 - -
Cpe02g01252 971 Gene3D - 77 376 - -
Cpe02g01252 971 Pfam Cation transporting ATPase, C-terminus 723 949 IPR006068 -
Cpe02g01252 971 PRINTS P-type cation-transporting ATPase superfamily signature 646 656 - -
Cpe02g01252 971 PRINTS P-type cation-transporting ATPase superfamily signature 380 394 - -
Cpe02g01252 971 PRINTS P-type cation-transporting ATPase superfamily signature 624 635 - -
Cpe02g01252 971 PRINTS P-type cation-transporting ATPase superfamily signature 199 213 - -
Cpe02g01252 971 SUPERFAMILY Calcium ATPase, transduction domain A 149 259 IPR008250 -
Cpe02g01252 971 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 387 628 IPR023299 GO:0000166
Cpe02g01252 971 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 118 307 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe02g01252 971 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 319 401 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe02g01252 971 Gene3D - 390 631 IPR023299 GO:0000166
Cpe02g01252 971 Gene3D - 666 683 IPR023214 -
Cpe02g01252 971 Gene3D - 377 665 IPR023214 -
Cpe02g01252 971 PANTHER CALCIUM-TRANSPORTING ATPASE 9 664 - -
Cpe02g01252 971 PANTHER CALCIUM-TRANSPORTING ATPASE 664 963 - -
Cpe02g01252 971 ProSitePatterns E1-E2 ATPases phosphorylation site. 382 388 IPR018303 -
Cpe02g01252 971 Gene3D - 45 262 - -
Cpe02g01252 971 SUPERFAMILY Calcium ATPase, transmembrane domain M 25 951 IPR023298 -
Cpe02g01252 971 Pfam Cation transporter/ATPase, N-terminus 27 94 IPR004014 -
Cpe02g01252 971 Pfam E1-E2 ATPase 147 360 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01252 Cpe-Chr2:11276691 Cpe07g00522 Cpe-Chr7:3438647 0 dispersed
Cpe02g01252 Cpe-Chr2:11276691 Cpe20g00800 Cpe-Chr20:7185035 9.40E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01252 K01537 - csv:101206729 1189.1