Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01275 ATGGCTGATGTTGGTCAGAACAACACCGGTGATTTTCCTGCTGTTCCTACCCATGGCGGTCAATATGTGCAGTACAATATCTTCGGGAATCCGTTTGAAATCACCTCCAAATATCGTCCGCCTATCATGCCTGTAGGTCGCGGCGCCTACGGAATCGTTTGTTCGATTTTGAATTCGGAGACCAACGAGATGGTTGCGGTTAAGAAGATTGCCAACGCGTTTGATAATCATATGGATGCGAAGCGGACGCTCCGTGAGATCAAGCTTCTCCGGCATTTGGATCACGAAAATGTAATAGGCATAAGGGATGTGATTCCTCCACCTCTGCGGAGAGAATTCAGTGATGTCTACATTTCCACTGAACTAATGGACACCGATCTTCACCAAATAATCCGCTCGAACCAAACTTTATCGGAAGAGCATTGTCAGTATTTCCTGTATCAGATTCTCCGAGGACTTAAATACATACATTCTGCAAATGTCATTCATCGGGACTTGAAACCGAGCAATCTACTGCTTAATGCGAACTGTGATCTTAAAATTTGTGACTTTGGTCTTGCTCGTCCAACTTCGGAAAATGAAAGCATGACAGAATATGTTGTTACAAGATGGTATAGGGCACCTGAGTTACTATTGAACTCTGATTATACAGCTGCTATTGATATATGGTCTGTTGGTTGCATCTATTTGGAGCTTATGAACAGAAGGCCTCTATTTCCAGGCAGGGATCATGTGCATCAGATGCGTTTACTGACTGAGGTAAAACAATCTATACAGAGTTTATGCAGTTTTTTGGTTATAGACTATCCAATTTTGACTATTAAAGATTTAGCTGATGTGAAAATGTTCCAGAGAATTTTTGTTCCTGGACAGTTCTTGTGA 882 42.06 MADVGQNNTGDFPAVPTHGGQYVQYNIFGNPFEITSKYRPPIMPVGRGAYGIVCSILNSETNEMVAVKKIANAFDNHMDAKRTLREIKLLRHLDHENVIGIRDVIPPPLRREFSDVYISTELMDTDLHQIIRSNQTLSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENESMTEYVVTRWYRAPELLLNSDYTAAIDIWSVGCIYLELMNRRPLFPGRDHVHQMRLLTEVKQSIQSLCSFLVIDYPILTIKDLADVKMFQRIFVPGQFL 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11398202 11399870 - Cp4.1LG02g12910.1 Cpe02g01275 465224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01275 293 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 15 255 - -
Cpe02g01275 293 Gene3D Transferase(Phosphotransferase) domain 1 123 254 - -
Cpe02g01275 293 SUPERFAMILY Protein kinase-like (PK-like) 44 258 IPR011009 -
Cpe02g01275 293 SMART serkin_6 39 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01275 293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Cpe02g01275 293 ProSitePatterns MAP kinase signature. 74 177 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe02g01275 293 ProSiteProfiles Protein kinase domain profile. 39 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01275 293 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Cpe02g01275 293 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 15 255 - -
Cpe02g01275 293 Gene3D Phosphorylase Kinase; domain 1 22 122 - -
Cpe02g01275 293 Pfam Protein kinase domain 44 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01275 Cpe-Chr2:11398202 Cpe07g00074 Cpe-Chr7:358653 4.34E-155 dispersed
Cpe02g01275 Cpe-Chr2:11398202 Cpe02g01279 Cpe-Chr2:11421450 1.14E-103 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62236 PF00069 Pkinase 2.30E-65 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01275 K20536 - csv:101202796 510.375