Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01315 ATGGAGAAATCTGGGTATGGTCGCGATGGAATTTTCAGGTCCTTACGGCCTCCGATCGTCTTTCCCAGAGATCCCAATTTGTCGGTGGCCTCTTTTATTTTCCGAAACTCATCGTCTTATCCAAACCGACTCGCCATAGTTGATGCGGAATCCTCTGATTCCGTGTCGTATTCCCAGCTTAAAGCCTCTGCAATTAAGATCTCCAATGGCTTGCTCCAATTGGGTATCGAGAAAAACGACGTGGTGATGATTTTTGCTCCAAATTCTGTTGAATTCTCCATTTGTTTCATTGGAATTGTTGCTATTGGGGCTATTGTCACCACTTGTAATCCTGTTTACATGGTCTCTGAGTTAACCAAGCAAGTTAGAGATGCTAAGCCCAAACTTATGATATCTGTTGTTGAATTGTGGGACAAAGTGAAGGTTCTAAACATCCCAACAGTGTTACTAGACCAGCAAATTCCTTCGGAAATCCAGTCCTCCAAAATTTTATGTTTCAATGATTTGATAAACATGGCTGGCGATAAATCTAGCTCCGAATTCCCAATTGTTGGGGTGAAGCAGAGTGATACAGCTGCTCTTCTGTATTCATCAGGAACAACAGGAGCCAGTAAGGGTGTGATTCTGACTCACAGAAACCTCATAACATCTTCACTGATGATAACATTGGATCAGAAGACTAATGGAGACGAAAATGGCACATATCTGAACTTTTTGCCGATGTTTCATGTGTTTGGATTGGTTTGTATAACATGTGCGCAGCTGCAGAGAGGAAACACCATTGTCTCTATGCCAAAGTTTAACCTGGAGAAGGCCCTGTGGGCAGTGGAGAAGTACAAGGTGACAGATCTATGGGTTGTGCCGCCTGTTGTGCTTGCTTTGGCAAAACAAAGTGTGGTAAAGAAATACAACCTTTCATCCCTGAAGCATATCGGTTCAGGGGCTGCACCTCTTGGGAAGGAATTAATGGATGAATGTGCTAACAACATTCCCAGTGCTGTGGTTCTCCAGGGTTATGGTATGACTGAGACTTGTGGAGTTGTTTCTTTGGAGAATCGAACAGTTGGCAAACGAAATACGGGTTCGGCTGGAACACTTGCCTCTGGTGTTGAGGCTCAAATAGTCAGTGTAGATACTTTGAAGCCTCTTCCTCCTAATCAATATGGAGAGATACTGGTTCGGGGACCGAATATGATGCTTGCTCTCCTCCTCTCTCAAATTTTGTTACTGAATCTCCAGGTTGCACCAGCTGAGCTTGAAGCACTGTTGGTCTCTCACCCTGAGATACTAGATGCTGTTGTCATCCCCTACCCCGACGATGAAGCTGGAGAAGTTCCAATCGCGTATGTCGTGCGATCTACCAATAGTTCTATGACCGAAGAGGACGTCCTCAAATTCGTGGCCGATCAGGTTTCTCCTTACAAAAGGCTAAGAAGAGTGACATTCATCAACAGTGTCCCCAAGTCAGTTTCTGGGAAAATCCTGAGGAGAGAACTCATTGAGAAAGTAAGAGCTAAAATCTAA 1524 44.29 MEKSGYGRDGIFRSLRPPIVFPRDPNLSVASFIFRNSSSYPNRLAIVDAESSDSVSYSQLKASAIKISNGLLQLGIEKNDVVMIFAPNSVEFSICFIGIVAIGAIVTTCNPVYMVSELTKQVRDAKPKLMISVVELWDKVKVLNIPTVLLDQQIPSEIQSSKILCFNDLINMAGDKSSSEFPIVGVKQSDTAALLYSSGTTGASKGVILTHRNLITSSLMITLDQKTNGDENGTYLNFLPMFHVFGLVCITCAQLQRGNTIVSMPKFNLEKALWAVEKYKVTDLWVVPPVVLALAKQSVVKKYNLSSLKHIGSGAAPLGKELMDECANNIPSAVVLQGYGMTETCGVVSLENRTVGKRNTGSAGTLASGVEAQIVSVDTLKPLPPNQYGEILVRGPNMMLALLLSQILLLNLQVAPAELEALLVSHPEILDAVVIPYPDDEAGEVPIAYVVRSTNSSMTEEDVLKFVADQVSPYKRLRRVTFINSVPKSVSGKILRRELIEKVRAKI 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11679436 11682803 - Cp4.1LG02g12490.1 Cpe02g01315 465264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01315 507 Gene3D - 405 506 IPR045851 -
Cpe02g01315 507 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 412 506 - -
Cpe02g01315 507 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 412 506 - -
Cpe02g01315 507 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 399 - -
Cpe02g01315 507 SUPERFAMILY Acetyl-CoA synthetase-like 17 505 - -
Cpe02g01315 507 Pfam AMP-binding enzyme 35 400 IPR000873 -
Cpe02g01315 507 Pfam AMP-binding enzyme C-terminal domain 418 493 IPR025110 -
Cpe02g01315 507 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 399 - -
Cpe02g01315 507 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
Cpe02g01315 507 Gene3D - 10 403 IPR042099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01315 Cpe-Chr2:11679436 Cpe03g00196 Cpe-Chr3:982403 4.44E-47 dispersed
Cpe11g00592 Cpe-Chr11:3543440 Cpe02g01315 Cpe-Chr2:11679436 7.37E-10 dispersed
Cpe02g01315 Cpe-Chr2:11679436 Cpe20g00318 Cpe-Chr20:1796227 2.86E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01315 K01904 - csv:101220141 828.935