Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01316 ATGGCTTCCTTATCAATGGCTACCATTTTACCCCGTCTATCTCGTTTGGGGTTTGCGTCGAGATTTTCTTTAAACCCATTATTTATGCTCCCCAAAAGTAGTAGAATCGAGAGATTGAATCGATTGAGACCCTTTTCGATGGCTTCGGCTCCTAAAGAATCTCCCGCAAACAATCCGGGACTTCACGCAACCCCCGATGATGCCACTAAAGGTTACATCATGCAACAGACTATGTTCCGGATTAAGGATCCTAAAGCCAGTCTTGACTTCTATTCTCGAGTTCTGGGCATGTCATTACTCAAGAGGCTGGATTTTCCTGAAATGAAGTTTAGCTTGTACTTCTTGGGTTATGAGGATGTTGCTTCTGCCCCAGACAACGCAGTTGACAGAACGGTCTGGACTTTTGGTCGGAAGGCTACAATTGAGTTAACACACAACTGGGGTACTGAAAGTGACCCTGAATTTAAAGGATATCATAATGGGAACTCGGATCCTCGTGGCTTTGGACACATTGGTATAACTGTTGATGACACGTATAAGGCGTGCGAGAGATTTGAACGCCTAGGAGTGGAATTTGTTAAGAAACCAGATGACGGCAAGATGAAAGGTATTGCATTTATAAAGGATCCTGATGGCTACTGGATTGAAATCTTCGACCTCAAACTTATCGGAAACGTGACTACTAACGCTGCTTGA 696 43.97 MASLSMATILPRLSRLGFASRFSLNPLFMLPKSSRIERLNRLRPFSMASAPKESPANNPGLHATPDDATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDVASAPDNAVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKLIGNVTTNAA 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11683808 11687305 + Cp4.1LG02g12560.1 Cpe02g01316 465265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01316 231 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 73 220 IPR037523 -
Cpe02g01316 231 ProSitePatterns Glyoxalase I signature 2. 161 177 IPR018146 GO:0004462|GO:0046872
Cpe02g01316 231 ProSitePatterns Glyoxalase I signature 1. 76 97 IPR018146 GO:0004462|GO:0046872
Cpe02g01316 231 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 64 218 IPR029068 -
Cpe02g01316 231 Gene3D - 48 223 IPR029068 -
Cpe02g01316 231 CDD GlxI_Zn 74 218 - -
Cpe02g01316 231 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 76 217 IPR004360 -
Cpe02g01316 231 PANTHER LACTOYLGLUTATHIONE LYASE 33 227 - -
Cpe02g01316 231 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 33 227 - -
Cpe02g01316 231 TIGRFAM glyox_I: lactoylglutathione lyase 62 225 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01316 Cpe-Chr2:11683808 Cpe10g00782 Cpe-Chr10:4443580 1.02E-12 dispersed
Cpe02g01316 Cpe-Chr2:11683808 Cpe11g01124 Cpe-Chr11:9332930 2.41E-12 transposed
Cpe02g01316 Cpe-Chr2:11683808 Cpe04g01111 Cpe-Chr4:9632015 3.14E-17 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01316 K01759 - mnt:21403510 380.563