Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01326 ATGGAACATAGTTATGGGTTTGAACAGCATGTTGCTCAACAAAGCCGGCGTGATAAGCTAAGAGTTCCGCAGAATTATTTGCGAGTAGTGGGGGAATTATCCAGTAACTCTGGCGAACAATTGGGTTTTCAGAACTCGGAGCATTCGGGGCTTGATCTGGATCTTGTTCGAATTCAAAGTTTTAATAAGAACGCGATTTTGCCTCATGATTTGTCTTCTTTTCCGGCAGAGATGATTAATTTTTCAAGGGATTCCAACGTTTTATCGGACCAAAGGCACATAATGTTGCGTCAAGAGCCAGAAGACCCTGCTCAATGCAGTAGGCAAATTCTGGCAGATGCTTCGTTGGGTTCTTTTGCCAACTCTTTGTTGAAAGCCTCTGGCGAAATTATGAATAATTCTTTGGGAGATTGGGTGGTGAACTGTGGAAGTAATTCTTTGGGAGGTGAAATGTTGAATGAGGAAGTAACGGATTCTACTGTATATTCACTGAAGCCAACTTGCATTGGATTCCAAACTTCAACCTCTTTTAACAATCCATCCAACGAAGCATTCATTCAGGATGGACAAAAGCGTGTAGCAGGAGAATTGCATTTGCCTCCAATTTACCAAAATAGTCTTCAGGGTGTTACTTCAGCCTCTATTGGAACTCAGGACATGGAAATGACATCCATCGTGCAGCATAATTTCACTGAAATTAACCAAACTGGTTCTTGTGAAGGCAGTGGAAATGAGCTTGCTCTTCTTCCTGTGTACAGGGATCAGCCAAATGTGTTGCCTTATGACAGTACTGGTTCTTGGACAGATAGAACTTTCTATAACTGCCGCAGCTGGACTGGCGAATTGGGTTCAATTGCAAGAAAAACTGGGCAAGAATTGAGAACTTTTATGAGTGATTCCAATCCACAAGGTCTATCTCTGTCGCTTTCTTCGAATCCGCCATCTAAATTACCCACCGCACAGTTCGAAGAATCAGAGGAATTACAGGAAAATATGACCGTGTTGAAAAATCCACAAGAATCCAAATCTGGCAAATCTGAGAGTTTTTGTAGATTACCAAACCCAACATCTATTGGCAATAAAAATCATGGGAAATCTCTTCAAGACGCGATGGGAGCTCCTATGAACACATATAGAAACACAGGGCCTCTTGGTCCCTTTACTGGTTATGCGACCATTTTAAAGAGTTCAAAATTCTTGAAGCCAGCCCAATTATTGTTGGACGAATTTTGTGGCTCGAATGGTCAAAAGTTTGTCCAACCATATGAAGTATTTGAGAAGACATCTGGGGAAGTTGGTCCCTCAGCGGTCCATAGTGCATTTAGAAACGAGGTTGTTAAAGAGAATAGTTCATGTGCTGAAGCCTCTACGTTCTGTGGTTCGAACGAGACAAATGTTAGTGGAGTTGGGAGCATCTCTTCTGAATCTCATCAACCAGAGTATCAGCAAAAGAAAGCGAAGCTTCTATATATCCTAGAGGAGTTTCTTAGTGCTCATATTATTTCTAAATGGCGAATGGCTGAAGCTGTTTTGCCATTGTTGGCGCGGTCTGAATCTGGTCTTAGTTCTGCCACACCCTATATTTCCCTGGCGCTCAAGACAGTCTCTAGGCACTTCCGCTGTCTGAAGAACGCCATCTCAGAACAATTGAAGTATCTGAGGAAGGTATTAGGTGAGGATTTGCCATCCCCCTCCGCTGGGACAAGCGGCAGCAAAGGTGATGCAAATTCGGCTAGGTTGAAATACATGGAACAGAGCTTCCAAAAGCAAAAATCTGGCATGGTCAATATGGGATTCCTCGAATCCCAACATGTGTGGAGGCCGCAGAGAGGTCTTCCAGAACGTGCTGTGGCAATTCTTAGAGCCTGGCTCTTTGAGCATTTTCTTCACCCGTACCCCACAGACACAGATAAGCACATGTTAGCCACTCAAACAGGCCTGTCTCGTAATCAGGTGTCAAATTGGTTCATAAATGCTCGAGTGCGAGTGTGGAAGCCAATGGTTGAAGAGATACACATGCTGGAAACTAAGGGCATGGCCGAAATGAACAACAAAAGCCATGGTACGAAAGATGGTAGTTCTACAATAGAAAACACAGCCGGTTGGATCAGTAGTGAACAACAGCCTCTAAAAAACCATGGTGTTGTAAATGAAATTGCCAGTCATCATCTGCAGTGCTTGGGGGTGGATTCCTCAAGTGGCGATAGAAATGGAGTAGGCAGTAGCAACCAACAGTGTGATCAAGACAAACAATCCAAATTGGACCAAGGGATTCAGTCCAACATGGAAGGGGAATTGATGGGGTTCATGCCATATCGAGCCAGTCCGGCTGAGGTTGGAGGACTTGGATCTGTCTCTCTAACATTAGGACTTCGCCACCGAGTTGAGAGTGCCCACCATCAACAGCAGCATCACCAATTGCAGCAACAAGATGACCAACTAATACGCCACTATGGAGGCCAAATGATCCATGATTTTGTGGGGTAA 2487 44.07 MEHSYGFEQHVAQQSRRDKLRVPQNYLRVVGELSSNSGEQLGFQNSEHSGLDLDLVRIQSFNKNAILPHDLSSFPAEMINFSRDSNVLSDQRHIMLRQEPEDPAQCSRQILADASLGSFANSLLKASGEIMNNSLGDWVVNCGSNSLGGEMLNEEVTDSTVYSLKPTCIGFQTSTSFNNPSNEAFIQDGQKRVAGELHLPPIYQNSLQGVTSASIGTQDMEMTSIVQHNFTEINQTGSCEGSGNELALLPVYRDQPNVLPYDSTGSWTDRTFYNCRSWTGELGSIARKTGQELRTFMSDSNPQGLSLSLSSNPPSKLPTAQFEESEELQENMTVLKNPQESKSGKSESFCRLPNPTSIGNKNHGKSLQDAMGAPMNTYRNTGPLGPFTGYATILKSSKFLKPAQLLLDEFCGSNGQKFVQPYEVFEKTSGEVGPSAVHSAFRNEVVKENSSCAEASTFCGSNETNVSGVGSISSESHQPEYQQKKAKLLYILEEFLSAHIISKWRMAEAVLPLLARSESGLSSATPYISLALKTVSRHFRCLKNAISEQLKYLRKVLGEDLPSPSAGTSGSKGDANSARLKYMEQSFQKQKSGMVNMGFLESQHVWRPQRGLPERAVAILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGMAEMNNKSHGTKDGSSTIENTAGWISSEQQPLKNHGVVNEIASHHLQCLGVDSSSGDRNGVGSSNQQCDQDKQSKLDQGIQSNMEGELMGFMPYRASPAEVGGLGSVSLTLGLRHRVESAHHQQQHHQLQQQDDQLIRHYGGQMIHDFVG 828
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11751697 11757505 + Cp4.1LG02g12570.1 Cpe02g01326 465275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01326 828 SMART HOX_1 606 670 IPR001356 GO:0003677
Cpe02g01326 828 ProSiteProfiles 'Homeobox' domain profile. 603 666 IPR001356 GO:0003677
Cpe02g01326 828 MobiDBLite consensus disorder prediction 731 752 - -
Cpe02g01326 828 CDD homeodomain 606 667 IPR001356 GO:0003677
Cpe02g01326 828 Pfam Homeobox KN domain 623 662 IPR008422 GO:0003677|GO:0006355
Cpe02g01326 828 MobiDBLite consensus disorder prediction 297 318 - -
Cpe02g01326 828 Pfam Associated with HOX 393 547 IPR006563 -
Cpe02g01326 828 Gene3D - 609 671 - -
Cpe02g01326 828 SMART prehox3 388 548 IPR006563 -
Cpe02g01326 828 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 65 795 - -
Cpe02g01326 828 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 65 795 - -
Cpe02g01326 828 SUPERFAMILY Homeodomain-like 608 672 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01326 Cpe-Chr2:11751697 Cpe03g00089 Cpe-Chr3:464228 4.93E-64 dispersed
Cpe02g01326 Cpe-Chr2:11751697 Cpe20g00740 Cpe-Chr20:6328594 3.16E-24 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49083 PF07526 POX 1.50E-20 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01326 - - cmax:111493386 1549.26