Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01342 ATGGGGTCCTGCTTGTCTGCGGAAAGCAGGAGCCCCATTCCTGGTTCCCCGACCTCTCCGGCTAAGCACTATCATCGAAGCAGGAGCAAGAGACGAAATGGTTCTCGGAGTTCTTCCTTTGGGGATCTGTCTCTCCATCGGATCCCTGGTAGGGTGTTCGGCAATGGCTTCACTGATTTCGCCTCTTTGTTCACGCAGCAGGGCAAGAAAGGAACCAATCAGGATGCCATGATTGTTTGGGAGAATTTTGGCTCTAGAACTGATACGATCTTCTGTGGGGTTTTTGATGGCCACGGCCCGTACGGTCATATGGTTGCGAAGAAAGTGAGGGATTCTCTTCCTCTGAGGTTAAGTACACATTGGGAGGTCAACTTGACCACAGATGATGTTCTTAGAGAGATAAGCCTCAATACTGGAAGTGTGAACTCAGATGAAGCTACCTCCTTTTTATCTGCTGATGAAGAGTTTAGGGCATCCACTGATGGTGATGGAGCAGAAAAGCAACCTGAAATTTTCCATGCCTTGAAGGAGTCATTTCTTAAGGCTTTTAGGGTTATGGATAGGGAACTCAGAATGCACCAAGGTATAGATAGCTTCTGTAGTGGCACAACGGCAGTGACTATGGTTAAACAGGGTCAGGATCTTGTCATTGGAAACGTTGGGGACTCCCGAGCTGTTCTGGGTACGAGAGATAAAGACGACTCTCTTGTTGCAATTCAATTGACTGTGGATCTGAAGCCAAATCTTCCAGCTGAAGCAGAGAGAATCCGTAAGTGTAGAGGTCGTGTCTTTGCTCTCCACGACGAACCTGATGTTCCTCGAGTTTGGCTTCCAAACAGCAACTCTCCTGGACTTGCCATGGCACGAGCATTCGGAGATTTCTGCCTCAAAGACTTTGGTCTAATCTCTGTACCTGAAATATCATATCGACGGCTCACTGAAAAAGACGAATTCATTGTTCTGGCTACAGATGGAATATGGGATGTGCTATCAAACAAAGAGGTTGTAAATGTCATTGCATCGGCTCCAAAACGCACTACTGCAGCTCGAACTTTAGTTGAGACAGCCGTGAAAGCATGGAAATATAAGTACCCAACTTCCAAGATTGATGACTGTGCGGTCGTTTGCCTTTTTCTTGACTCGAACTCCGGAAATCTATCATCTGCTTCCAATACCAAACCAGAGGTGCAACAAAGTTTAATAGATCACATCAGCAGTGCAGTTGAGAGTGAAGATTTCTCTAGCCCAAATGGTCTGAATCATTCGGGAACCGTCCAAATCTGCAAGGAAACTCCGGAGGATGGAAGCGAAGAAGAAGATGAATCGAAGGAGGAAGAACATTCAGAAATGGGAATAGAATGGTCTGCCCTGGAAGGCGTCTCACGCGTAAATACTCTGGTAAACCTGCCGAGATTCGATCCTGGAAAAGAAGATAAGAAAGGGCGGAAGTAA 1452 46.56 MGSCLSAESRSPIPGSPTSPAKHYHRSRSKRRNGSRSSSFGDLSLHRIPGRVFGNGFTDFASLFTQQGKKGTNQDAMIVWENFGSRTDTIFCGVFDGHGPYGHMVAKKVRDSLPLRLSTHWEVNLTTDDVLREISLNTGSVNSDEATSFLSADEEFRASTDGDGAEKQPEIFHALKESFLKAFRVMDRELRMHQGIDSFCSGTTAVTMVKQGQDLVIGNVGDSRAVLGTRDKDDSLVAIQLTVDLKPNLPAEAERIRKCRGRVFALHDEPDVPRVWLPNSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTEKDEFIVLATDGIWDVLSNKEVVNVIASAPKRTTAARTLVETAVKAWKYKYPTSKIDDCAVVCLFLDSNSGNLSSASNTKPEVQQSLIDHISSAVESEDFSSPNGLNHSGTVQICKETPEDGSEEEDESKEEEHSEMGIEWSALEGVSRVNTLVNLPRFDPGKEDKKGRK 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11885714 11889826 + Cp4.1LG02g12340.1 Cpe02g01342 465291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01342 483 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 467 - -
Cpe02g01342 483 PANTHER ALPHABET, ISOFORM E-RELATED 1 467 - -
Cpe02g01342 483 Pfam Protein phosphatase 2C 153 357 IPR001932 -
Cpe02g01342 483 SUPERFAMILY PP2C-like 58 380 IPR036457 -
Cpe02g01342 483 MobiDBLite consensus disorder prediction 1 42 - -
Cpe02g01342 483 CDD PP2Cc 60 379 IPR001932 -
Cpe02g01342 483 ProSiteProfiles PPM-type phosphatase domain profile. 60 379 IPR001932 -
Cpe02g01342 483 SMART PP2C_4 49 377 IPR001932 -
Cpe02g01342 483 MobiDBLite consensus disorder prediction 1 16 - -
Cpe02g01342 483 MobiDBLite consensus disorder prediction 410 455 - -
Cpe02g01342 483 MobiDBLite consensus disorder prediction 410 429 - -
Cpe02g01342 483 Gene3D - 60 381 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01342 Cpe-Chr2:11885714 Cpe17g00991 Cpe-Chr17:7521732 4.48E-166 dispersed
Cpe10g00979 Cpe-Chr10:5533633 Cpe02g01342 Cpe-Chr2:11885714 2.51E-108 dispersed
Cpe14g00830 Cpe-Chr14:6723905 Cpe02g01342 Cpe-Chr2:11885714 3.72E-165 transposed
Cpe11g00714 Cpe-Chr11:5285265 Cpe02g01342 Cpe-Chr2:11885714 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01342 - - csv:101222150 822.387