Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01353 ATGGAGCAAGGAGCTATTGAGCCAAAGGGCACGGCGGACATAGACAATTCAAGCTCATACAAAAAGATCATAATAGTTGCAGCCATTGCAGCCGGAATCCAATTCGGTTGGGCTCTGCAGCTCTCATTACTAACACCATACGTCCAACAACTCGGTGTTTCGCACACATGGTCAGCTTTCATTTGGCTCTGTGGTCCAATGTCCGGCCTAATTGTACAGCCAACCGTCGGCTACTACAGCGATCGCTGCACCTCGAGGTTCGGTCGCCGTCGTCCCTTCATCGTAGCCGGAGCTATATCGGTAGCCGCCGCAGTTTTCCTCATTGGCTTTGCAGCAGACATTGGGCATTCACTAGGAGATCAACTCACCAAACCCACAAAACCAAGGGCAGTGACAATCTTCGTGGTCGGATTTTGGGTTCTTGATGTCGCTAACAACATGTTACAAGGCCCTTGTCGAGCTTTGTTAGCTGATATGTCATGTAGCAACCAAAAGAAAATGAGGGTCGCTAATGGATTCTTCTCATTCTTTATGGGCGTAGGGAATGTCTTAGGGTATGCAGCAGGGTCCAATAGCTCACTCTATAAGCTCCTTCCATTTACCATCACTAAAGCTTGTGATGCTTATTGCGCTAATCTCAAGACATGTTTTTTAATCGACATTGTGTTGCTGCTAGCCATTACAACAGCCGCCGTGTTGTTAGTGAGCGAGAGGCCTTATGAGAACGCTATTGACAACGAAACAGAGCCGTTTTTTGGGCAATTGTGTGGGGCTCTCAAGCGGCTGTCAAAGCCCATGTGGGTGTTGTTGCTTGTCACAGCATTGAATTGGATTGGTTGGTTTCCTTTTATAATGTATGACACGGATTGGATGGGCGCTGAAGTGTATGGTGGCAAGCCACAGGGGACGCCAGAACAAGAGAGGAATTATGACCTTGGTGTGCGAGCAGGGGCGCTTGGTTTGATGGTTAACTCATTTGTTCTTGGGTTTACTGCATTGGGTATTGAGCCAATTAGCCGTGCTGTTGGTGGGCTAAGATGGGTTTGGGGAATTGTGAATGTTGTATTGGCAATTTGTATGGGGTGCACGGTGGCTGTCACGAAGGCGGCAGAGAAATGGAGGGCTGTTCACGGCGGCTTGGCGCTTCCTCCGCCGGATGTTAAAGGTGGTGCCTTTGCGATCTTTGCGATATTGGGTGTTCCGTTATCGGTGACTTATAGTGTTCCGTTTGCTCTTGCGTCGATCTTTTCGTTGTCATCGAATGCAGGGCAAGGGCTGTCTTTGGGGATTTTGAATCTGTTTATAGTGATACCGCAGTTCTTTGTGTCGGCTGTTAGTGGGCCGCTTGATGCTGCTCTTGGAGGGGGGAATTTGCCGGCTTTTGTCATGGGGGGGATTGCTGCGGCTGTGAGTGCTGTGTGTGCTATGTTTTTGCTTCCTGATCCGCCGCCGGAGACTCATGTTGCTGTCACGATGGGGGCTGGGCATTGA 1491 49.63 MEQGAIEPKGTADIDNSSSYKKIIIVAAIAAGIQFGWALQLSLLTPYVQQLGVSHTWSAFIWLCGPMSGLIVQPTVGYYSDRCTSRFGRRRPFIVAGAISVAAAVFLIGFAADIGHSLGDQLTKPTKPRAVTIFVVGFWVLDVANNMLQGPCRALLADMSCSNQKKMRVANGFFSFFMGVGNVLGYAAGSNSSLYKLLPFTITKACDAYCANLKTCFLIDIVLLLAITTAAVLLVSERPYENAIDNETEPFFGQLCGALKRLSKPMWVLLLVTALNWIGWFPFIMYDTDWMGAEVYGGKPQGTPEQERNYDLGVRAGALGLMVNSFVLGFTALGIEPISRAVGGLRWVWGIVNVVLAICMGCTVAVTKAAEKWRAVHGGLALPPPDVKGGAFAIFAILGVPLSVTYSVPFALASIFSLSSNAGQGLSLGILNLFIVIPQFFVSAVSGPLDAALGGGNLPAFVMGGIAAAVSAVCAMFLLPDPPPETHVAVTMGAGH 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11947402 11948892 - Cp4.1LG02g12210.1 Cpe02g01353 465302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01353 496 CDD MFS_SLC45_SUC 34 477 - -
Cpe02g01353 496 SUPERFAMILY MFS general substrate transporter 22 485 IPR036259 -
Cpe02g01353 496 Gene3D MFS general substrate transporter like domains 16 487 IPR036259 -
Cpe02g01353 496 TIGRFAM GPH_sucrose: sucrose/H+ symporter 19 483 IPR005989 GO:0005887|GO:0008515|GO:0015770
Cpe02g01353 496 Pfam MFS/sugar transport protein 28 279 - -
Cpe02g01353 496 PANTHER SUCROSE TRANSPORT PROTEIN SUC2-LIKE 20 489 - -
Cpe02g01353 496 PANTHER SUGAR TRANSPORTER 20 489 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00193 Cpe-Chr7:1211848 Cpe02g01353 Cpe-Chr2:11947402 1.80E-158 transposed
Cpe07g00646 Cpe-Chr7:4628819 Cpe02g01353 Cpe-Chr2:11947402 4.66E-120 transposed
Cpe11g00702 Cpe-Chr11:5080334 Cpe02g01353 Cpe-Chr2:11947402 1.54E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01353 K15378 - csv:116401998 773.467