Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01379 ATGTCGACTGTTGATTCTTCACGGGAGGAAAATGTTTACTTGGCCAAGTTGGCCGAACAGGCCGAACGGTATGAGGAAATGGTAGAGTTCATGGAGAAAGTTGCCAAAACTGTGGATGTGGAGGAGCTTACTGTTGAGGAGAGGAATCTTCTCTCTGTTGCTTACAAGAATGTCATTGGGGCTCGGAGGGCCTCTTGGAGGATAATATCTTCCATTGAGCAGAAGGAAGAAAGTCGTGGAAATGAGGACCATGTTGCAATTATCAAGGAGTACCGTAGCAAAATCGAAACTGAATTGAGCAAGATCTGTGATGGGATTTTGAGCCTACTCGAGTCTCATCTCATCCCATCAGCCTCATCTGCTGAGTCGAAGGTGTTTTATCTCAAAATGAAAGGTGACTACCACAGGTATCTGGCTGAGTTCAAGACTGGAGCTGAAAGGAAAGAAGCAGCTGAGAGCACATTATTAGCTTACAAGTCTGCTCAGGATATTGCTCTTGCTGAATTGGCTCCTACACATCCAATTAGGCTAGGTCTTGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTCAATTCGCCAGACCGTGCTTGCAATTTGGCAAAGCAGGCTTTTGACGAAGCGATTTCTGAGCTTGACACATTGGGTGAAGAATCATACAAGGATAGCACCTTAATCATGCAACTTCTCCGAGACAACTTGACCCTTTGGACCTCTGATGTTGGGGATGAAGCCGGCGATGAAATTAAGGAAGCATCAAAACGTGAATCAGGAGAGGGACATGGACAGTAG 792 45.2 MSTVDSSREENVYLAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKEYRSKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDVGDEAGDEIKEASKRESGEGHGQ 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12113181 12119296 - Cp4.1LG02g13890.1 Cpe02g01379 465328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01379 263 PANTHER 14-3-3 PROTEIN 5 257 IPR000308 -
Cpe02g01379 263 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cpe02g01379 263 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cpe02g01379 263 Gene3D - 1 251 IPR036815 -
Cpe02g01379 263 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Cpe02g01379 263 PIRSF 14-3-3 2 250 IPR000308 -
Cpe02g01379 263 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cpe02g01379 263 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cpe02g01379 263 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cpe02g01379 263 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cpe02g01379 263 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cpe02g01379 263 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cpe02g01379 263 Coils Coil 14 34 - -
Cpe02g01379 263 PANTHER 14-3-3-LIKE PROTEIN GF14-F 5 257 - -
Cpe02g01379 263 SMART 1433_4 8 251 IPR023410 -
Cpe02g01379 263 Pfam 14-3-3 protein 14 238 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00365 Cpe-Chr2:2010903 Cpe02g01379 Cpe-Chr2:12113181 4.07E-159 dispersed
Cpe02g01379 Cpe-Chr2:12113181 Cpe07g00142 Cpe-Chr7:797418 1.08E-162 dispersed
Cpe11g00438 Cpe-Chr11:2479731 Cpe02g01379 Cpe-Chr2:12113181 1.60E-99 wgd
Cpe02g01379 Cpe-Chr2:12113181 Cpe03g00956 Cpe-Chr3:7368376 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01379 K06630 - csv:101222068 500.745