Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01399 ATGTCTTGGACGCCTGATGGCTATGTGGCAGTTGTGACATTGAACAACTTCCAAATGTACCGGCACATAATGAGTCCCGGGTGGACGATGGGATGGACGTGGGCGAAAAAGGAAGTGATATGGTCGATGGTCGGGTCGCAAACGACCGAGCAAGGCGATTGCTCCAAGTTCAAAGGAAACATTCCTCACTGTTGTAAGAAAACCCCCACTGTTGTGGATTTGATGCCAGGAGTTCCTTACAATCAGCAGTTTACAAACTGCTGCAAAGGTGGGGTTGTGGCAGCTTGGGGACAAGACCCTCAAGCTGCTGTTTCAGCCTTTCAGATCAGTGTTGGCCAAGCAGGTACTTCAAATAAGACTGTCAAACTCCCCAAGAACTTCACTCTGCTTGGTCCCGGCCCCGGGTACACTTGTGGCCCCGCCAAGGTCGTGCCTTCCACCACCTTCCTCACGCCCGACCGCCGTCGCAAAACTCAAGCTCTGATGACTTGGAATGTGACCTGCACTTACTCTCAGTTTTTGGCCAGAAAAAATCCTAATTGTTGTGTTTCTTTCTCATCGTTCTACAACGATACGATCACGTCTTGTCCGTCTTGCACCTGTGGTTGCCAAAACAAGAACAGCTGCATCAAGAGTGATTCTAAGATTCTTAAGCTGGTTGGAATCAATACACCAAAGAAAGACAACACCCCGTTGCTGCAGTGCACGCATCATATGTGCCCGGTTCGAGTTCACTGGCACGTGAAACAAAATTATAAGGAATACTGGCGGGTGAAGATCGCCATCACAAACTTCAACTATCGAATGAACTATTCGCTTTGGTCTCTCGTCGTCCAGCATCCAAATCTGAACAATGTAACCCAAGTTTTCAGCTTCAACTACAAACCCCTTGTTCCCTATGAATCAATCAATGACACGGGAATGTTCTACGGGACGAAGTTTTACAACGACCTTCTGATGGAAGCAGGGCCATTTGGGAATGTACAATCAGAGGTATTGCTGCAAAAGGATCAGAACACCTTCACCTTTAAGCAGGGATGGGCATTCCCTCGGAAAGTTTACTTCAATGGCGACGAGTGCATGCTTCCACCACCGGATACATACCCGTTCCTGCCAAACACTGCCCGCCAAAGGCCCGTCGCCCTCTCAACATCATTTGCTTTGCTGCTGCTCTTCCTGCTGCTAGCTATTTGTTGA 1197 48.71 MSWTPDGYVAVVTLNNFQMYRHIMSPGWTMGWTWAKKEVIWSMVGSQTTEQGDCSKFKGNIPHCCKKTPTVVDLMPGVPYNQQFTNCCKGGVVAAWGQDPQAAVSAFQISVGQAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTTFLTPDRRRKTQALMTWNVTCTYSQFLARKNPNCCVSFSSFYNDTITSCPSCTCGCQNKNSCIKSDSKILKLVGINTPKKDNTPLLQCTHHMCPVRVHWHVKQNYKEYWRVKIAITNFNYRMNYSLWSLVVQHPNLNNVTQVFSFNYKPLVPYESINDTGMFYGTKFYNDLLMEAGPFGNVQSEVLLQKDQNTFTFKQGWAFPRKVYFNGDECMLPPPDTYPFLPNTARQRPVALSTSFALLLLFLLLAIC 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12223631 12226394 + Cp4.1LG02g14080.1 Cpe02g01399 465348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01399 398 PIRSF COBRA 1 398 IPR006918 GO:0010215|GO:0031225
Cpe02g01399 398 PANTHER PROTEIN COBRA 1 394 IPR006918 GO:0010215|GO:0031225
Cpe02g01399 398 Pfam COBRA-like protein 8 171 IPR006918 GO:0010215|GO:0031225
Cpe02g01399 398 PANTHER COBRA-LIKE PROTEIN 1 394 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01399 Cpe03g00975 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01399 Cpe-Chr2:12223631 Cpe04g01448 Cpe-Chr4:11568796 0 dispersed
Cpe02g01399 Cpe-Chr2:12223631 Cpe02g01400 Cpe-Chr2:12225363 0 tandem
Cpe18g00713 Cpe-Chr18:7036903 Cpe02g01399 Cpe-Chr2:12223631 0 wgd
Cpe02g01399 Cpe-Chr2:12223631 Cpe20g00086 Cpe-Chr20:461896 2.60E-29 wgd
Cpe02g01399 Cpe-Chr2:12223631 Cpe03g00975 Cpe-Chr3:7848729 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01399 - - csv:101217724 795.423