Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01400 ATGATCATGGCTGTTCCCATTCTCAGATTACCCTTTTTCCTTCCCATTCTCGCCATTTTGCTACTCTTCTCCACCTTTCTTACTTCAACAGAAGCGTATGATCCACTTGATCCAAATGGAAACATTACTATCAAGTGGGATGTTATAAGCTGGACCGCTGATGGCTATGTTGCTGTCGTTACTATGTATAATTTCCAACAATATCGTCATATTCAAGCCCCGGGATGGTCTCTGCAATGGGGATGGGTTAAGAAAGAGGTCATATGGAGCATGTTGGGAGGCCAAGCAACCGAACAAGGTGATTGTTCAAGATATAAGGGGAACATCCCTCATAGCTGCAAGAGGGATCCAACCATTGTTGATCTATTGCCCGGGACTCCGTATAACCAGCAGATTGCAAATTGCTGCAAAGGCGGAGTTCTCAACTCCTGGGTGCAAGATCCAACTACTGCAGTGAGTTCATTTCAACTCAGTGTTGGTGCTGCGGGAACCTCGAATAAAACTGTCAGATTACCAAAGAACTTCACCTTAAAAGCACCTGGGCCTGGTTATACTTGTGGACCTGCAAAGATCGTTAGACCGACCAAATTCATTTCGTCTGACAAACGTAGGGTTACACAGGCCTTGATGACATGGAATATTACATGCACATATTCACAATTTCTGGCTCAAAAAACTCCGACTTGCTGTGTTTCGCTGTCATCATTTTACAACGACACAATTGTTTCTTGCCCTAAATGCTCGTGTGGTTGTCCAAACAACTTGAAGGGAGCCCAAAATTGTGTGGAGCCAAATTCTCCGCATTTAGCCTCTGTTGTTACCAATGCTAGTTCTAGCAATAACAATGTGGTACCTTCGGTTCAGTGTACAAGCCATATGTGCCCGATCCGAGTTCACTGGCATGTGAAGATTAACTATAAGGAGTATTGGCGTGCCAAGATCACAATTACAAACTTCAATTACGCGATGAACTATACAAATTGGAACTTAGTTGCCCAACATCCCAATTTCGACAATTTAACAACGATTTTCAGCTTCAACTACATGTCGATCAATCCATATGGAACTATAAATGATACTGCAGTCCTGTGGGGAGTCAAGTTCTACAATGATTTGCTCATGCAAGCAGGCCCTTCTGGGAATGTGCAGACAGAGCTACTTTTCCGAAAGAATCCATCGATTTTCACATTCGATAAAGGCTGGGCTTTCCCTCGGAGGATTTATTTCAATGGCGACAACTGCGTCATGCCGCCTCCAGATGCCTATCCCCACTCACCAAACACGGGTTTGAAGCAAGGTGTCTCGTTGTTTACTACGCTATTGTCGATTTCCTTGACTCTCCTTTCCCTTTGCCATTTATTTGCATAA 1368 43.86 MIMAVPILRLPFFLPILAILLLFSTFLTSTEAYDPLDPNGNITIKWDVISWTADGYVAVVTMYNFQQYRHIQAPGWSLQWGWVKKEVIWSMLGGQATEQGDCSRYKGNIPHSCKRDPTIVDLLPGTPYNQQIANCCKGGVLNSWVQDPTTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVRPTKFISSDKRRVTQALMTWNITCTYSQFLAQKTPTCCVSLSSFYNDTIVSCPKCSCGCPNNLKGAQNCVEPNSPHLASVVTNASSSNNNVVPSVQCTSHMCPIRVHWHVKINYKEYWRAKITITNFNYAMNYTNWNLVAQHPNFDNLTTIFSFNYMSINPYGTINDTAVLWGVKFYNDLLMQAGPSGNVQTELLFRKNPSIFTFDKGWAFPRRIYFNGDNCVMPPPDAYPHSPNTGLKQGVSLFTTLLSISLTLLSLCHLFA 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12225363 12229026 - Cp4.1LG02g13920.1 Cpe02g01400 465349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01400 455 PANTHER PROTEIN COBRA 12 449 IPR006918 GO:0010215|GO:0031225
Cpe02g01400 455 Pfam COBRA-like protein 56 219 IPR006918 GO:0010215|GO:0031225
Cpe02g01400 455 PANTHER COBRA-LIKE PROTEIN 12 449 - -
Cpe02g01400 455 PIRSF COBRA 5 455 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01400 Cpe-Chr2:12225363 Cpe03g00975 Cpe-Chr3:7848729 0 dispersed
Cpe08g00164 Cpe-Chr8:1061672 Cpe02g01400 Cpe-Chr2:12225363 2.72E-38 dispersed
Cpe15g00578 Cpe-Chr15:6611543 Cpe02g01400 Cpe-Chr2:12225363 7.86E-26 dispersed
Cpe02g01399 Cpe-Chr2:12223631 Cpe02g01400 Cpe-Chr2:12225363 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01400 - - cmos:111457618 795.808