Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01431 ATGCGGATGAGTTGTAATGGTTGCAGAGTTCTTCGCAAAGGTTGCAGTGAAAATTGTAGTATTCGACCTTGTTTGCAGTGGATCAAGAGTCCTGAATCTCAGGCTAACGCTACTGTTTTTCTTGCTAAGTTTTATGGCCGTGCTGGACTTATGAATCTTATCAACGCTGGTCCTGAGCATCTACGGCCTGCGATCTTTAGATCTCTTCTCTATGAGGCTTGTGGACGGATTGTGAATCCGATTTACGGATCGGTTGGATTGTTGTGGTCTAGTAATTGGCATCTCTGTCAGGCGGCTGTTGAGGCGGTGCTTAAAGGTGCTCCGATTATTCCGATTAATTCTGAGGCGGCCACGACTGGCGATGGACCGCCGTTGAAGGCTTACGACATTCGGCATATTTCTAAGGATGAAAACTCCGCCGCCTCCAACGATGGTGGAGCGAATCGGCGAGTCAGGACTCGGTGCCGTTTTAAGCGATCGGCCGTGAAGGATAAAGAGAGTACTGGAATTGTATCTGCTGTAGCGGAGTCGACTCGGCGACTGTTCTCCTCGACAGAGATTAACCGTTCGTCGAGCGGTGAGTCGTCGCTGACTCACCAATCTGACTCGCCGCATCTCGAACATGAGAGCAAAGAAACCGAGAGCATGATCTCGGTGGAGACGGCGGATGTTTCTCCTCCTTCGGCGCCGTCGGCTTTTTTCAGATCGGAATCCAGTCACGTACAAAGAAAATTCACCAACCACGACGGCGGCAGGATGACAATTCCGGAAAGCGAATTAGCTCTAGAACTTACCCTGGGGATGGAGCCGGTATCACGTGCCCAGCACGTGGTTCCAATGAAGAAGCGAAAGATAGAGGCCAACGATGGGCTGAGGCCCAATAAGGAAACGCTGTATGGTGAGAACAACAACAGGAGCATGGCGATAAGTGTCGGAAATAGTGAAGCTGAACTTGGAGAG 960 50.62 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINSEAATTGDGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRRLFSSTEINRSSSGESSLTHQSDSPHLEHESKETESMISVETADVSPPSAPSAFFRSESSHVQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEANDGLRPNKETLYGENNNRSMAISVGNSEAELGE 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12418418 12422214 - Cp4.1LG02g17090.1 Cpe02g01431 465380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01431 320 MobiDBLite consensus disorder prediction 201 216 - -
Cpe02g01431 320 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 286 - -
Cpe02g01431 320 MobiDBLite consensus disorder prediction 184 240 - -
Cpe02g01431 320 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 286 - -
Cpe02g01431 320 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Cpe02g01431 320 MobiDBLite consensus disorder prediction 217 240 - -
Cpe02g01431 320 PIRSF AS2 1 305 IPR017414 -
Cpe02g01431 320 MobiDBLite consensus disorder prediction 184 200 - -
Cpe02g01431 320 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01431 Cpe03g00701 CCT
Cpe02g01431 Cpe03g00701 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00212 Cpe-Chr2:1091004 Cpe02g01431 Cpe-Chr2:12418418 5.09E-49 dispersed
Cpe02g01431 Cpe-Chr2:12418418 Cpe04g01407 Cpe-Chr4:11336629 7.64E-86 dispersed
Cpe02g01431 Cpe-Chr2:12418418 Cpe03g00701 Cpe-Chr3:4248445 4.22E-171 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49096 PF03195 LOB 1.90E-24 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01431 - - cmax:111492566 568.54