Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01442 ATGAAGCGAGATCACTCTTACCAGTCACCAAATCCGGCCGCCGGCAAGGCCAAGATATGGCCGGAGGGGGAGGAGGACGACGACGAGCTCCTAGCAGCTCTAGGCTACAATGTCCGGTTGTCGGACATGGCCGACGTCGCTCTGAAACTCGAACAGCTCGAAATGGTAATGGGTTTGTCGGAAGAAGACGGAATTTCTCATCTTTCTTCCAACACCGTCCATTACAATCCCTCCGATGTGTCTTCTTGGGTTCAAAGCATGCTCGCTGAACTCAACACCGATGACTCTGTTTTCGCCGAAGCCGAATCCACCTCCGCCATCGCGGCATTCGCCGACGACTCTGAGTACGATCTCCGAGCAATTCCGGGCGTTGCTGTTTTCCCCCAAATCGATTCCAATACACCCAGAAAGCGATTTAAGAAATCAGAGTCCGAATCGGTTCTTGTTACTGCTGCTTCTTCTTCTTCATCGTCGTCGGAGCCGTCGCGCACGGTGGTTCTGGCGGATTCCACCGACACTGGCGTCTATCTAGTCCATACCCTCCTCGCCTGCGCCGAGGCCGTCGATATCAACAACCTCAACCTCGCCGATACATTACTGAAACACATCAGAATCCTGGTCGAGGCCCAAGGCGGCGCGATGAGGAAAGTCGCCGGTTATTTTGCACAAGCCCTTACTCACCACATTTACGGATTGCACCCACAAAAGCCCTTCGAATATGCATCTTCATACACCGATCTTCTCCAAATGAATTTCTACGTGTCTTGCCCGTATATGAAATTCGCCCATTTCACGGCCAATCAAGCGATTCTCGAATCTGTTGGCACCGCCACAACCGTCCACGTCGTTGATTTTAGCCTTCAGCAAGGCCTCCAATGGCCGGCGTTGATTCAAGCCCTCGCGCTGCGTCCCGGAGGGCCGCCAGCGTTTTATCTCACCGGAATCGGCCCCCCGCCGGGGGAAAATTCTAGCGACGGATTACAGGAAGTGGGTTTGAAATTGGCTCAATTCGCGGATACGATCGGTGTGGAATTCGAATTCCGTGGGTATTTCTGCAACGATTTAGCCGAGCTCGATCCGTCCATACTCAATTTAGAATCAGAAACCGTCATCGTGAACTCTGTTTTCAAGCTCCATCGGCTACTGGCGCATCCGGGCGCGATCGAGAAAGTTCTAAGATCAATCAAAGAACTTAACCCCAAAATCGTCACCGTCGTGGAGCAGGTCGCTGACCACAACGGACCATCGTTCACCGGCCGATTCACAGAAGCGTTACACTATTACTCGAGCTTGTTCGATTCGTTGGAAGGGTCGCTGGCAGGGGAGGAGGATGTGGCAGGGTCGGAGGAGTATTTGGGGAGGCAAATCTTGAACGTGGTGGCAGGTGAAGGTTCCGACCGGGTCGAGCGGCACGAGACATTGGCGCAGTGGCAGAGCCGGTTGGGTTCGAGTGGGTTCGAGATGGTTCATTTGGGTTCAAACGCGTTCAAGCAGGCGAGTACTCTGTTGGCTCTGTTCAGCGGCGGAAATGGTTACAGAGTTGAAGAGAATAATGGAAGTTTGACGTTGGGTTGGCACACTCGGCCGCTTATCGCCACCTCGGCGTGGGCTGTGGCCTCCTGTACCGGCGGCGAGTCGAGCTGA 1644 54.01 MKRDHSYQSPNPAAGKAKIWPEGEEDDDELLAALGYNVRLSDMADVALKLEQLEMVMGLSEEDGISHLSSNTVHYNPSDVSSWVQSMLAELNTDDSVFAEAESTSAIAAFADDSEYDLRAIPGVAVFPQIDSNTPRKRFKKSESESVLVTAASSSSSSSEPSRTVVLADSTDTGVYLVHTLLACAEAVDINNLNLADTLLKHIRILVEAQGGAMRKVAGYFAQALTHHIYGLHPQKPFEYASSYTDLLQMNFYVSCPYMKFAHFTANQAILESVGTATTVHVVDFSLQQGLQWPALIQALALRPGGPPAFYLTGIGPPPGENSSDGLQEVGLKLAQFADTIGVEFEFRGYFCNDLAELDPSILNLESETVIVNSVFKLHRLLAHPGAIEKVLRSIKELNPKIVTVVEQVADHNGPSFTGRFTEALHYYSSLFDSLEGSLAGEEDVAGSEEYLGRQILNVVAGEGSDRVERHETLAQWQSRLGSSGFEMVHLGSNAFKQASTLLALFSGGNGYRVEENNGSLTLGWHTRPLIATSAWAVASCTGGESS 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12454581 12456224 - Cp4.1LG02g16900.1 Cpe02g01442 465391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01442 547 Pfam GRAS domain family 177 536 IPR005202 -
Cpe02g01442 547 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 24 536 IPR005202 -
Cpe02g01442 547 PANTHER DELLA PROTEIN RGL1 24 536 IPR030006 GO:0003712|GO:0005634
Cpe02g01442 547 SMART DELLA_2 28 101 - -
Cpe02g01442 547 MobiDBLite consensus disorder prediction 1 22 - -
Cpe02g01442 547 Pfam Transcriptional regulator DELLA protein N terminal 28 94 IPR021914 -
Cpe02g01442 547 ProSiteProfiles GRAS family profile. 168 537 IPR005202 -
Cpe02g01442 547 Gene3D - 27 91 IPR038088 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01442 Cpe03g00709 CCT
Cpe01g01990 Cpe02g01442 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01442 Cpe-Chr2:12454581 Cpe13g00364 Cpe-Chr13:3951163 0 dispersed
Cpe13g00607 Cpe-Chr13:5904374 Cpe02g01442 Cpe-Chr2:12454581 1.06E-48 transposed
Cpe02g01442 Cpe-Chr2:12454581 Cpe03g00709 Cpe-Chr3:4282487 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49098 PF03514 GRAS 1.40E-120 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01442 K14494 - csv:101203095 820.461