Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01454 ATGGGACTACTTAGAATTCATGTGTGTAGAGGAATCAATCTTGCTATAAGAGATGTTTATAGCAGTGATCCTTATGTTATTTTGAAGATGGGCAAATTGTTTGTATACGATAAGGACCGGTTCTCACTAGATGATAAGATGGGCGATGCGGAGATCGATGCTCGTCCGTTCGTGGAAGTTGTTAAGATGAAACTAAACAACCTTTCAAATGGAACCATCGTAAGAACGATTCAACCAAGTAAGAGCAATTGTTTGTCGGAAGAAAGTTACATCGTTTGGGAAAATGGAGAAGTTACTCAAAAAATGTTTGTAAGGCTAAGAAATGTGGAATGTGGGGAAGTTGAGCTGCAATTGAAATGGATTGGTATTCCTGGTTCTACACGGTTATAG 390 38.72 MGLLRIHVCRGINLAIRDVYSSDPYVILKMGKLFVYDKDRFSLDDKMGDAEIDARPFVEVVKMKLNNLSNGTIVRTIQPSKSNCLSEESYIVWENGEVTQKMFVRLRNVECGEVELQLKWIGIPGSTRL 129
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12546919 12547595 + Cp4.1LG02g16860.1 Cpe02g01454 465403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01454 129 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 32 IPR044562 -
Cpe02g01454 129 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 32 - -
Cpe02g01454 129 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 32 127 - -
Cpe02g01454 129 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 76 IPR035892 -
Cpe02g01454 129 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 32 127 IPR044562 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01454 Cpe03g00725 CCT
Cpe02g01454 Cpe03g00725 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01454 Cpe-Chr2:12546919 Cpe18g00677 Cpe-Chr18:6805030 2.12E-48 dispersed
Cpe02g01454 Cpe-Chr2:12546919 Cpe03g00725 Cpe-Chr3:4422149 2.80E-65 wgd
Cpe02g01454 Cpe-Chr2:12546919 Cpe09g01112 Cpe-Chr9:9578261 2.33E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01454 - - csv:101218477 189.504