Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01540 ATGGAGGAAAATTTCGTTCCATTTCGTGGAATCAAGAAGGACCTTAAAGGGAGGTTGCTCTGCTACAAACAAGACTGGACTGGTGGATTCAGAGCTGGATATAGGATTTTGGCTCCCACTACTTACATATTCTTTGCCTCTGCTATTCCTGTCATTTCATTTGGTGAACAATTGGAGAGAAGTACTGATGGGGTGTTGACTGCTGTTCAAACCTTAGCCTCCACAGCTCTTTGTGGCATCATTCACTCCATTGTTGGAGGTCAACCTTTGTTAATCTTGGGAGTAGCTGAGCCTACTGTTATTATGTATACCTTCATGTTCAATTTCGCGAAGGAACGACCCGAGTTGGGTCGGAATCTGTTTCTAGCATGGAGTGGATGGGTGTGTGTTTGGACTGCAGCCTTGCTGTTCTTAATGGCTATATTAGGAGCATGTTCCATCATCAATCGGTTCACTCGTCTCGCTGGTGAATTGTTCGGTTTGCTTATCGCGATGCTTTTCATGCAGGAAGCGGTGAAAGGACTTGTGGATGAGTTTCGTATCCCGGAACGAGAAAATCCGAAGTTGATCGAGTTTATACCTTCGTGGAGGTTTGCCAATGGGATGTTTGCTTTGGTACTGTCGTTTGGCCTTGTACTCACTGCGTTAAGGAGTCGAAAAGCTCGGTCGTGGCGATATGGATCTGGTTGGCTCAGAAGCTTGATAGCAGACTATGGAGTGCCGCTCATGGTTCTTGTTTGGACAGGTATATCCTTCATTCCGTCGAAAAACGTCCCACAAGGTATCCCGAGACGACTCTTCAGCCCGAATCCATGGTCTCCCGGTGCATACGAGAATTGGACTGTTATTAAGGATATGCTCGACGTCCCAGTCCTTTATATCTGTGGAGCGTTCATCCCTGCTACGATGATTGCGGTGCTTTACTATTTCGACCATAGTGTTGCATCTCAACTTGCTCAGCAGAAAGAGTTTAATTTGAGGAAGCCATCTTCTTACCATTATGATTTACTTCTCTTGGGATTTTTGACCTTAATATGTGGCCTTCTTGGAATTCCTCCTTCTAATGGAGTCATCCCACAATCTCCGATGCATACGAAGAGCCTAGCTACTCTCAAACACCAGTTGCTGCGGAATAAACTTGTAAAAACGACACGGTGTAGTATGAGAAAGAATGCTAGCTTGGGACAATTGTATGGAAGTATGCAAGAAGCATATCATCAAATGCAGACTCCCCTGATCTACCAACAGCCCGCATCTCGTGGACTGAATGAGCTAAAAGAAACAACGATTCTGGCAGCTTCGAGTATGGGCAGTTTCGATGCTCCGGTCGATGAGACGGTGTTCGACATTGAAAAGGAAATCGATGATCTATTGCCTGTCGAGGTGAAAGAACAGCGTGTCAGTAATTTGCTTCAAGCTGCAATGGTGGGAGGATGCGTTGCAGCCATGCCCGTCCTGAAAAAGATCCCGACCTCGGTTCTATGGGGTTACTTCGCGTTTATGGCCATCGAAAGCTTGCCTGGTAACCAGTTTTGGGAAAGAATCTTGTTGCTCTTCACTGCACCCAGTAGAAGATACAAAGTTCTTGAGGATTACCACGCGACATTCGTCGAAACCGTGCCATTCAAATCGATTGTACTTTTTACCATTTTCCAAATTGTATATTTGTTCATATGTTTTGGACTAACATGGGTTCCGATCGCCGGGGTCATGTTTCCTTTGATGATCATGCTCCTCGTCCCGGTACGACAATACCTTCTTCCCAAGTTCTTCAAAGGTGCACATCTCCAAGATCTCGATGCAGCCGAGTACGAAGAAGCATCGGCTTTACCGTTCAATCTTGCTACGGAAGCCGAGCTGGGAGCTGGAGCCTCATTTGGTGGCGATGGGGAGATTTTAGACGATGTTATCACTCGAAGCCGTGGCGAATTTAGGCATATTAGTAGTCCTAAGATCACAAGCTCCAATGCATCACCAAGATGTGAGCGAAAGAGTTTCGAGAGCCCTCGGGTGAGCGAGCTAAGAGGAGTGCAAAGTCCTCGAGCCGGGGGACGAGGAACACCATCGTCCGGTCTGGGAAAGAGCCCTCTTAAGAACACGGCATCAAAGTAG 2112 46.69 MEENFVPFRGIKKDLKGRLLCYKQDWTGGFRAGYRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWSGWVCVWTAALLFLMAILGACSIINRFTRLAGELFGLLIAMLFMQEAVKGLVDEFRIPERENPKLIEFIPSWRFANGMFALVLSFGLVLTALRSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGISFIPSKNVPQGIPRRLFSPNPWSPGAYENWTVIKDMLDVPVLYICGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLICGLLGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVKTTRCSMRKNASLGQLYGSMQEAYHQMQTPLIYQQPASRGLNELKETTILAASSMGSFDAPVDETVFDIEKEIDDLLPVEVKEQRVSNLLQAAMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKSIVLFTIFQIVYLFICFGLTWVPIAGVMFPLMIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEEASALPFNLATEAELGAGASFGGDGEILDDVITRSRGEFRHISSPKITSSNASPRCERKSFESPRVSELRGVQSPRAGGRGTPSSGLGKSPLKNTASK 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13082660 13086495 + Cp4.1LG02g16010.1 Cpe02g01540 465489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01540 703 MobiDBLite consensus disorder prediction 648 662 - -
Cpe02g01540 703 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016021
Cpe02g01540 703 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Cpe02g01540 703 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016021
Cpe02g01540 703 Gene3D Helical hairpin bin 18 60 - -
Cpe02g01540 703 PANTHER BORON TRANSPORTER 2-RELATED 1 687 - -
Cpe02g01540 703 MobiDBLite consensus disorder prediction 648 703 - -
Cpe02g01540 703 PANTHER ANION EXCHANGE PROTEIN 1 687 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01540 Cpe03g00817 CCT
Cpe02g01540 Cpe03g00817 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01540 Cpe-Chr2:13082660 Cpe11g00345 Cpe-Chr11:1871037 0 dispersed
Cpe20g00245 Cpe-Chr20:1386587 Cpe02g01540 Cpe-Chr2:13082660 0 transposed
Cpe02g01540 Cpe-Chr2:13082660 Cpe03g00817 Cpe-Chr3:5092684 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01540 K24194 - csv:101205388 1301.58