Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01544 ATGGCAGCCATGGCTCTTTCATCTACCTTCACTGGAAAAGCTGTTCCTTTGAATGCACCAACCGAGCTGTTTTCCTCGGTTCGCAGCAATGGAAGAGTCTCAATGAGGAAGTCTGGAAAGCCAGCTTCTTCCTCAGGCAGCCCATGGTATGGTCCCGACCGTGTTAAGTACCTCGGACCATTCTCTGGTGAGCCTCCATCTTACCTGACAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCAGGTCTATCAGCTGACCCTGAGACCTTCGCTAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTTGGATGTGTATTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCCCAAATCTTCAGTGAGGGTGGCCTTGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAGAGCATTTTGGCCATTTGGGCATGTCAAGTAGTGCTTATGGGTGCAGTTGAAGGTTACCGTATTGCAGGAGGACCTCTTGGAGAAATTACCGATCCCATCTACCCAGGTGGCAGCTTTGATCCCCTCGGGCTGGCCGATGATCCAGAGGCATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAACGGTCGTCTCGCAATGTTTTCCATGTTCGGGTACTTTGTGCAGGCCATTGTAACAGGAAAAGGTCCTTTGGAAAACCTCGCAGATCACCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGGAAGTGA 798 49.62 MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13109098 13109895 - Cp4.1LG02g15910.1 Cpe02g01544 465493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01544 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 2 265 - -
Cpe02g01544 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Cpe02g01544 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Cpe02g01544 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Cpe02g01544 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 265 IPR001344 GO:0009765|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01544 Cpe03g00823 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00975 Cpe-Chr2:8747885 Cpe02g01544 Cpe-Chr2:13109098 1.40E-66 dispersed
Cpe02g01544 Cpe-Chr2:13109098 Cpe19g01123 Cpe-Chr19:7560916 2.97E-172 dispersed
Cpe04g00672 Cpe-Chr4:6780729 Cpe02g01544 Cpe-Chr2:13109098 6.56E-152 transposed
Cpe02g01544 Cpe-Chr2:13109098 Cpe03g00823 Cpe-Chr3:5135966 1.85E-161 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01544 K08912 - csv:101203342 519.235