Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01551 ATGTCTCGCCAAGTTCCGATCACTGCGTTCCACAAGTCCAAGACGCTTGATAACAAATATATGCTGGGAGATGAGATCGGGAAAGGAGCATATGGGCGAGTTTACAAAGGTCTGGATTTGGAGAATGGGGATTTTGTTGCTATTAAACAAGTTTCCTTGGAGAATATTGCTCAAGAGGACCTCAACGTTATCATGCAAGAGATTGACTTACTGAAGAATTTGAACCACAAAAACATTGTGAAGTATCTTGGATCTCTGAAAACAAAGTCTCACCTTCACATAATACTCGAGTATGTGGAAAATGGATCATTTGCCAACATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCACTTTATATTTCTCAGGTTTTGAAGTTTTCTATCATTGTCCTTTATTCGACTATTTCAGGGGCATGGCTAATATTAGTGCCTCTTTCTTCTCCGGCGGAGGCCGATTCGGCTACCATGTCTCGCCAAGTTCCGATCACTGCGTTCCACAAGTCCAAGACGCTTGATAACAAATATATGCTGGGAGATGAGATCGGGAAAGGAGCATATGGGCGAGTTTACAAAGGTCTGGATTTGGAGAATGGGGATTTTGTTGCTATTAAACAAGTTTCCTTGGAGAATATTGCTCAAGAGGACCTCAACGTTATCATGTGCTCTCACTGGATATTTTTTCCTTCTCTGCTACTCAAATTGTTGGTGGGGTGTAATGATGATTTTCAGCAAGAGATTGACTTACTGAAGAATTTGAACCACAAAAACATTGTGAAGTATCTTGGATCTCTGAAAACAAAGTCTCACCTTCACATAATACTCGAGTATGTGGAAAATGGATCATTTGCCAACATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCACTTTATATTTCTCAGGTTTTGGAAGGCTTGGTTTATCTACATGAGCAGGGTGTAATTCATCGCGATATAAAGGGTGCGAACATTCTGACTACCAAAGAGGCAAGACACACTAGGACTGCTAGTTTAAGGTTGAAAAGTAAAGAGAAGATTTACTTCTTTGAAGGATGTTTTACTGATTTATTCCTTATTTCCCAAAAGGAGGAGGCTACTGTGGCTGATTGCTGGAACAAAGATCAAAATGATTGGGATCTTGGTTTAGGGGGTCTTGTGAAACTTGCTGATTTTGGTGTTGCGACAAAATTAACAGAGGCTGATGTTAATACGCATTCAGTTGTTGGAACACCTTACTGGATGGCTCCTGAGGACAAGCATCCTCCAATTCCGGATAGCCTATCACCAGACATCACTGATTTTTTACGCCAGTGCTTTAAGAAGGATGCTAGGCAAAGGCCTGATGCGAAAACTTTGCTTTCTCATCCTTGGGTACAAAATTGTCGACGGGCTTTGCATTCTTCTCTTCGTCATAGCGGCACGTTGAGAAACACTCAACTAGATGGATCACCAGGAGCAGAAATTTCTAATGGAGACGATCAAAACTCTTGTGAAAGTCCTTCAGCGGAGAAAAATGAAATTGCTGGTTCTGATTTTAAAGCTGATTCAAGGAAGGAGTTGGCATCAGATGTTGCCACTGATACGAGCAAGTCCCAAAAACATTTTGCTTCAGGCCATTTTGATGAGGAAGGAGAAGGCATAGAAGAAGATACTCCATTGGATCAAGTTCCAACCTTATCTATTCGTGATAATTTATCTCTTCTAACTGGTTCAGGCAGACTTGCAACCTCTGAGCCGACTGAGTCTCATGAATCTCATGGTAGAGCCCATGATGAAGTGATAATGAATGGAGGAGTGCCATCGGCAGAACTAAGAAAAGTTGCGTCTAGGAAATATGGAGAGAAAGAAACTTCTACAACATCTGGAAATAGCTCGTTTGGTTTTGGACCTGAAGGTCATGATAATTGTTTTCAAAAGGTTTCAAAGATGTCGATTGCTTCGGGAGGAAATGAGCTGAGTAAATTTAGCGACACTCCTGGAGATGCTTCCTTGGATGATTTATTTCAACCTTTAGATAAGCTCCCCGCTGATCGATCTGCTGAAGCATCAACATCATTATCTACCCCACAATCAAACATAGGTAATGTGCCAGTAAATAATGTTGGGAAAAATGACCTGGCCACAAAGTTGAGGGCTACGATTGCTCAGAAACAAATGGAAAATGAAATGGGACAAGTAAATGGTGGCGATGACCTGCTTCGACTAGTGATGGGTGTTTTAAATGATGATGTTGATATTGATGGTTTGGTTTTTGATGAGAAGTTGCCCGGAGAAAACCTTTATCCTTTGCCGGCTGTTGAATTCGGCAGATTAGTTGGGTCGTTGAGACCTGATGAACCTGAAGACGTAATTGTATCTGCCTGTCACAAATTGATTGCCATCTTCCATCATAGACCTGAGCAGAAAATTGTTTATGTTACACAGCATGGTCTACTCCCATTGACGGAGTTGCTTGAAGTTCCTAAAACTCGTATTACATGTTCAGTGCTCCAGCTTATAAATCAGATAGTTAAGGATAACGATGACTTCCAAGAAAATGCTTGTCTTGTTGGTCTAATTCCTCTGGTAATGGGATTTGCGGTTCCTGACCGGCCCCGAGAAGTTCGTATGGAAGCAGCTTATTTCTTTCAGCAGCTTTGTCAATCAAGCTCTTTGACACTGCAAATGTTCGTTGCATGCCGTGGAATACCTGTATTAGTAAGCTTTTTAGAGGCTGATTATGCAAAGTACAGGGAAATGGTTCACCTAGCTATTGATGGAATGTGGCAGATCTTTAAGCTCCAGCGTTCCACTCTTCGAAATAGTTTCTGTCGTATATCAGCAAAAAGTGGAATTCTGCTTAGGCTTATTAACACCCTCTACAGCTTAAATGAGGCAACTCGCTTAGCTTCTATAACAGTGGGGGCTGGAAATCCATTTGATGGTTTTCAACGGTCACGATCAGGTCAACTAGATTCTAGCCACTGTATATTCAGTCAGTATGAGGCCTCATTTCCTGTGCCTGATCAGCCTGATCTTTTGAAGGTCAGGCATGGAATAGTTGATCCTCACCTGTCTGCTGGAACACCAGAACCTTCAAGGGCTTCATCTTCACATTCTCAAAGATCAGATGCGAATCAATCTGATCACCGACACTTTTCCACAGATGCTGGTAGGCTGTCTAGCAATGCCACAAATGAAGCGTTGGGGACTTCTAAACCACCGGAGCTAGCATCTTTAGAAAAAGTTGTAAATTTAGCAACCAAGGAACCGTCGGGCTTTGTTTCTAAAGAACATGAAAATGTAGATAGATGGAGAATTGAGCAGATGGTCAATTCAAACAGGACTTCCACAGATAGACCTCCAAAATTTCTGGAACCTGCATCTAATGGATTTCCTACAGCCTCGATGGTTACGCCGCAAGAGCAAGTTCGGCCCCTTCTAAGTCTATTGGACAAAGAACCCCCTTCTCGACACTTGTCTGGTCAGCTTGAGTACATGCACCACCTTTCTGGATTGGAGAGACATGAAACTATAATGCCTCTATTGCATGCATCAAATGAAAAGAAGATGAATGGGGAGCTTGATTTCTTAATGGCAGAATTCGCTGAGGTTTCTCAACGTGGAAAAGAAAATGGAAATCTTGACCCCACTTCTAAGGTTTCCCTTAAAACGGTGGGAAAGAAGGTAGAACCCCTGGTGTCCAATGAGGGAGCTCCATCCACATCTGGAATTGCTTCACAGACAGCATCTGGGGTGCTTTCAGGTTCGGGCGTATTAAATGCTATACCGGGGAGTTCAACATCCTCTGGACTTCTCTCGCACATGGTTTCAACTATGAACGCTGATGTTGCAAGGGAATACCTAGCGAAGGTGTCTGATCTTCTGCTTGAGTTTGCTCAGGCAGATACAACTGTGAAGTCATATATGTGCAGCCATAGCTTGCTCAATCGCCTTTTCCAGATGTTCAATAGGGTAGAGCCCTCAATTCTCTTGAAGATATTGAAGTGTATAAATCATCTATCAACAGATCCAAACTGCTTAGAAAATCTTCAGCGAGCAGATGCAATTAAATATTTGATTCCAAACCTTGAACTCAAAGAAGGGTCTCTAGTATCGCAAATACATACTGAGGTCCTCAGCACACTATTCAATTTGTGCAAGATAAATAAGAGGAGGCAAGAATGTGCAATTGAAAATGGAATTATTCCACACTTGATGCATTTTATTATGTCAGACTCTCCTCTTAAAAAAGATGCATTGCCTCTACTGTGCGATATGGCCCATGCATCTCGTAATTCTAGGGAGCAGTTAAGAGCCCACGGTGGCTTAGATGTATATTTAAGCCTACTTGAGGATGAGATTTGGTCTGTCACGGCATTGGATTCTATTGCTGTGTGCTTAGCTCATGACAATGACAACCGAAAAGTTGAACAGGCTTTGCTGAAGAAGGAAGCAATTAAAAAATTGGTGAAGTTTTTCCAGTGCTGTCCGGAACAACATTTTGTGCATATATTGGAGCCGTTCTTGAAAATCATCACAAAATCTTCCCGAATCAATACAACATTGGCTGTCAATGGATTGACCCCATTGCTTATAGCAAGGCTGGACCATCAGGATGCGATTGCTCGGCTTAATCTACTCAAACTGATCAAGGCTGTGTATGAGCATCATCCACGACCAAAGCAATTGATTGTGGAAAATGATTTACCTCATAAACTTCAGAATTTGATTGAGGAACGCAGAGATGGACAACGGTCTGGTGGTCAGGTATTGGTGAAACAAATGGCCACATCTCTGCTAAAAGCACTTCACATCAATACAGTTTTGTAA 4839 41.83 MSRQVPITAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNVIMQEIDLLKNLNHKNIVKYLGSLKTKSHLHIILEYVENGSFANIIKPNKFGPFPESLVALYISQVLKFSIIVLYSTISGAWLILVPLSSPAEADSATMSRQVPITAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNVIMCSHWIFFPSLLLKLLVGCNDDFQQEIDLLKNLNHKNIVKYLGSLKTKSHLHIILEYVENGSFANIIKPNKFGPFPESLVALYISQVLEGLVYLHEQGVIHRDIKGANILTTKEARHTRTASLRLKSKEKIYFFEGCFTDLFLISQKEEATVADCWNKDQNDWDLGLGGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEDKHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWVQNCRRALHSSLRHSGTLRNTQLDGSPGAEISNGDDQNSCESPSAEKNEIAGSDFKADSRKELASDVATDTSKSQKHFASGHFDEEGEGIEEDTPLDQVPTLSIRDNLSLLTGSGRLATSEPTESHESHGRAHDEVIMNGGVPSAELRKVASRKYGEKETSTTSGNSSFGFGPEGHDNCFQKVSKMSIASGGNELSKFSDTPGDASLDDLFQPLDKLPADRSAEASTSLSTPQSNIGNVPVNNVGKNDLATKLRATIAQKQMENEMGQVNGGDDLLRLVMGVLNDDVDIDGLVFDEKLPGENLYPLPAVEFGRLVGSLRPDEPEDVIVSACHKLIAIFHHRPEQKIVYVTQHGLLPLTELLEVPKTRITCSVLQLINQIVKDNDDFQENACLVGLIPLVMGFAVPDRPREVRMEAAYFFQQLCQSSSLTLQMFVACRGIPVLVSFLEADYAKYREMVHLAIDGMWQIFKLQRSTLRNSFCRISAKSGILLRLINTLYSLNEATRLASITVGAGNPFDGFQRSRSGQLDSSHCIFSQYEASFPVPDQPDLLKVRHGIVDPHLSAGTPEPSRASSSHSQRSDANQSDHRHFSTDAGRLSSNATNEALGTSKPPELASLEKVVNLATKEPSGFVSKEHENVDRWRIEQMVNSNRTSTDRPPKFLEPASNGFPTASMVTPQEQVRPLLSLLDKEPPSRHLSGQLEYMHHLSGLERHETIMPLLHASNEKKMNGELDFLMAEFAEVSQRGKENGNLDPTSKVSLKTVGKKVEPLVSNEGAPSTSGIASQTASGVLSGSGVLNAIPGSSTSSGLLSHMVSTMNADVAREYLAKVSDLLLEFAQADTTVKSYMCSHSLLNRLFQMFNRVEPSILLKILKCINHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHTEVLSTLFNLCKINKRRQECAIENGIIPHLMHFIMSDSPLKKDALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDEIWSVTALDSIAVCLAHDNDNRKVEQALLKKEAIKKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPHKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL 1612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13156043 13174682 + Cp4.1LG02g15870.1 Cpe02g01551 465500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01551 1612 MobiDBLite consensus disorder prediction 481 565 - -
Cpe02g01551 1612 SMART serkin_6 180 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01551 1612 SUPERFAMILY ARM repeat 779 973 IPR016024 -
Cpe02g01551 1612 Pfam Protein kinase domain 21 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01551 1612 Pfam Protein kinase domain 181 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01551 1612 MobiDBLite consensus disorder prediction 686 709 - -
Cpe02g01551 1612 Gene3D Transferase(Phosphotransferase) domain 1 429 543 - -
Cpe02g01551 1612 MobiDBLite consensus disorder prediction 517 533 - -
Cpe02g01551 1612 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 427 1568 - -
Cpe02g01551 1612 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 393 426 - -
Cpe02g01551 1612 Gene3D Transferase(Phosphotransferase) domain 1 17 131 - -
Cpe02g01551 1612 Gene3D Transferase(Phosphotransferase) domain 1 177 345 - -
Cpe02g01551 1612 MobiDBLite consensus disorder prediction 1024 1078 - -
Cpe02g01551 1612 ProSiteProfiles Protein kinase domain profile. 180 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01551 1612 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 130 - -
Cpe02g01551 1612 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 162 338 - -
Cpe02g01551 1612 SUPERFAMILY Protein kinase-like (PK-like) 9 129 IPR011009 -
Cpe02g01551 1612 ProSitePatterns Protein kinases ATP-binding region signature. 186 209 IPR017441 GO:0005524
Cpe02g01551 1612 Gene3D - 774 976 IPR011989 -
Cpe02g01551 1612 MobiDBLite consensus disorder prediction 689 709 - -
Cpe02g01551 1612 MobiDBLite consensus disorder prediction 1059 1074 - -
Cpe02g01551 1612 MobiDBLite consensus disorder prediction 481 512 - -
Cpe02g01551 1612 PANTHER MAP KINASE KINASE KINASE 427 1568 - -
Cpe02g01551 1612 SMART arm_5 807 847 IPR000225 GO:0005515
Cpe02g01551 1612 SMART arm_5 1392 1431 IPR000225 GO:0005515
Cpe02g01551 1612 SMART arm_5 1346 1390 IPR000225 GO:0005515
Cpe02g01551 1612 SMART arm_5 892 935 IPR000225 GO:0005515
Cpe02g01551 1612 SUPERFAMILY Protein kinase-like (PK-like) 160 478 IPR011009 -
Cpe02g01551 1612 MobiDBLite consensus disorder prediction 581 639 - -
Cpe02g01551 1612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Cpe02g01551 1612 SUPERFAMILY ARM repeat 1289 1586 IPR016024 -
Cpe02g01551 1612 Gene3D - 1267 1607 IPR011989 -
Cpe02g01551 1612 Gene3D Transferase(Phosphotransferase) domain 1 388 428 - -
Cpe02g01551 1612 PANTHER MAP KINASE KINASE KINASE 2 130 - -
Cpe02g01551 1612 PANTHER MAP KINASE KINASE KINASE 393 426 - -
Cpe02g01551 1612 PANTHER MAP KINASE KINASE KINASE 162 338 - -
Cpe02g01551 1612 MobiDBLite consensus disorder prediction 623 637 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01551 Cpe-Chr2:13156043 Cpe12g00214 Cpe-Chr12:1402800 2.21E-22 dispersed
Cpe02g01551 Cpe-Chr2:13156043 Cpe03g00830 Cpe-Chr3:5199118 8.05E-14 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62242 PF00069 Pkinase 1.80E-39 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01551 - - csv:101206469 2331.21