Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g01552 | ATGGCGGCTGCAGCTACAACAAGCGTTGTGCCGCCGAATCGGCGGCGAGCGATTACCGCGCCGGAAGATAAGTTGGAATTCGAGACGACGGAGGGGGTTGAGCCGATCTTGAGTTTCGATCAGATGGGTATTAAGGATGATCTTCTCCGTGGAATATATGCATATGGTTTTGAAAAACCCTCGGCCATTCAGCAAAGAGCCGTGAGGCCTATTATCGATGGTCGAGATGTCATTGCTCAGGCCCAATCTGGAACTGGCAAGACCTCCATGATTGCCCTTACCGTTTGCCAGATGGTTGATACCTCCAGCAGAGAGGTGCAGGCCTTGATCTTGTCCCCTACGAGAGAATTGGCAACTCAGACAGAGAAGGTTATATTGGCAATTGGCGACTACATTAATATACAAGCACACGCATGTATTGGAGGCAAAAGTGTGGGTGAAGATATCAGAAAGCTTGAGTTTGGAGTTCAGGTTGTGTCAGGAACTCCTGGAAGAGTCTGTGACATGATCAAGAGAAGAACATTGCGTACTAGAGCCATTAAGTTGTTAGTTCTGGATGAATCTGATGAGATGCTGAGCAGAGGGTTTAAAGACCAAATTTATGATGTATACCGATATCTCCCACCAGAACTTCAGGTTGAATGGCTGACTGAGAAGATGCGCAGCAATAATTTCACAGTTTCACATATGCATGGAGACATGCCTCAAAAGGAAAGAGATGCAATTATGGGGGAGTTTCGATCGGGAACGACCCGTGTCCTAATCACTACTGATGTATCACTAGTGATAAATTATGACCTTCCAAACAATCGAGAACTTTACATTCACAGGATAGGAAGGTCTGGTCGGTTTGGGCGCAAGGGTGTTGCTATCAACTTCGTGAAAAGTGATGACATCAAGATCCTGAGAGATATTGAACAGTACTACAGTACCCAGATTGATGAGATGCCCATGAACGTTGCTGATTTGATTTAG | 975 | 45.85 | MAAAATTSVVPPNRRRAITAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIDGRDVIAQAQSGTGKTSMIALTVCQMVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI | 324 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 13173787 | 13178152 | - | Cp4.1LG02g15800.1 | Cpe02g01552 | 465501 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g01552 | 324 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 179 | 324 | IPR001650 | - | |
Cpe02g01552 | 324 | Gene3D | - | 210 | 323 | IPR027417 | - | |
Cpe02g01552 | 324 | PANTHER | BNAC03G41130D PROTEIN | 213 | 317 | - | - | |
Cpe02g01552 | 324 | PANTHER | BNAC03G41130D PROTEIN | 22 | 213 | - | - | |
Cpe02g01552 | 324 | SMART | helicmild6 | 214 | 285 | IPR001650 | - | |
Cpe02g01552 | 324 | CDD | SF2_C_DEAD | 212 | 294 | - | - | |
Cpe02g01552 | 324 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 29 | 217 | IPR027417 | - | |
Cpe02g01552 | 324 | Pfam | Helicase conserved C-terminal domain | 213 | 285 | IPR001650 | - | |
Cpe02g01552 | 324 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 37 | 65 | IPR014014 | GO:0003724 | |
Cpe02g01552 | 324 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 213 | 317 | - | - | |
Cpe02g01552 | 324 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 68 | 238 | IPR014001 | - | |
Cpe02g01552 | 324 | Gene3D | - | 43 | 209 | IPR027417 | - | |
Cpe02g01552 | 324 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 74 | 322 | IPR027417 | - | |
Cpe02g01552 | 324 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 22 | 213 | - | - | |
Cpe02g01552 | 324 | Pfam | DEAD/DEAH box helicase | 62 | 208 | IPR011545 | GO:0003676|GO:0005524 | |
Cpe02g01552 | 324 | SMART | ultradead3 | 56 | 237 | IPR014001 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g01552 | Cpe-Chr2:13173787 | Cpe11g00363 | Cpe-Chr11:1999303 | 2.32E-105 | dispersed | |
Cpe02g01552 | Cpe-Chr2:13173787 | Cpe03g00831 | Cpe-Chr3:5222609 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g01552 | K13025 | - | csv:101222664 | 407.912 |