Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01582 ATGGCGTTGGCTAGTCGCTTGCGATCCACCATCCCCGTCCTCAGCAAGTTTTTGAGATCCGAATCGTCCTGCACTCCGCTCTCAAGGACTTATGCCGCTACTTCAGGGAAACATGAACAAAAAGTGAAGCTCTCAAGGACTTATGCCGCTACTTCAGGGAAACATGAACAAAAAGTGAAGTGCATGCGCCAGATATGTTTCTTTCTGGAATTCACGTACAAGCGTGCTTTCTTATTTGCTGCATTTCAGATGCCTCTTGCTTTGTTTGGAGGGTCTGGAAACTATGCCTCTGCTTTGTATATAGCTGCAGTAAAAGCTAATTCTCTAGACAAGGTGGAGTCTGAGCTTTTTAATCTCGTTGAGGCTATTAAGAAAAGTCCTACATTTGCTCAGTTCACAATGGACCTGTCTGTTCCAGCTGAGACTAGAGTTAAAGCTATCGATGAAATTTCTGCTGAAGCAAAATTTTCAGAGGTTGTTAAGAACTTTTTGGTTGTGTTGGCTGAGAATGGGAGGCTGAGATATATAGATAGCATAGCAAAGAGATTTTTGGAGTTGACTATGGCTCATAAGGGAGAAGTTAAAGCAGCTGTTACAACTGTTATTCCCATTCCACCACAAGAAGAGAACGAACTGAAGGAGACATTGCAAGATATTATTGGACAAGGCAAGAAGGTTAAGCTCGAGCAAAAGATTGATCCCAGCATACTTGGTGGTCTAATTGTAGAATTCGACGAGAAAGTATTTGACATGTCTATTAAAACCCGGGCACGTCAATTGGAGAGGTTCTTGCGCCAACCTGTTTCTCTTGATGGCCTCTAG 822 42.94 MALASRLRSTIPVLSKFLRSESSCTPLSRTYAATSGKHEQKVKLSRTYAATSGKHEQKVKCMRQICFFLEFTYKRAFLFAAFQMPLALFGGSGNYASALYIAAVKANSLDKVESELFNLVEAIKKSPTFAQFTMDLSVPAETRVKAIDEISAEAKFSEVVKNFLVVLAENGRLRYIDSIAKRFLELTMAHKGEVKAAVTTVIPIPPQEENELKETLQDIIGQGKKVKLEQKIDPSILGGLIVEFDEKVFDMSIKTRARQLERFLRQPVSLDGL 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13335417 13338568 - Cp4.1LG02g15670.1 Cpe02g01582 465531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01582 273 Pfam ATP synthase delta (OSCP) subunit 93 262 IPR000711 GO:0015986|GO:0046933
Cpe02g01582 273 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 92 193 IPR026015 -
Cpe02g01582 273 PRINTS ATP synthase delta subunit signature 91 110 IPR000711 GO:0015986|GO:0046933
Cpe02g01582 273 PRINTS ATP synthase delta subunit signature 239 257 IPR000711 GO:0015986|GO:0046933
Cpe02g01582 273 PRINTS ATP synthase delta subunit signature 172 186 IPR000711 GO:0015986|GO:0046933
Cpe02g01582 273 PRINTS ATP synthase delta subunit signature 161 172 IPR000711 GO:0015986|GO:0046933
Cpe02g01582 273 PRINTS ATP synthase delta subunit signature 224 239 IPR000711 GO:0015986|GO:0046933
Cpe02g01582 273 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 94 263 IPR000711 GO:0015986|GO:0046933
Cpe02g01582 273 Hamap ATP synthase subunit delta [atpD]. 87 266 IPR000711 GO:0015986|GO:0046933
Cpe02g01582 273 Gene3D - 92 184 IPR026015 -
Cpe02g01582 273 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 78 266 - -
Cpe02g01582 273 PANTHER ATP SYNTHASE DELTA CHAIN 78 266 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01582 Cpe-Chr2:13335417 Cpe06g00964 Cpe-Chr6:9084013 1.16E-08 dispersed
Cpe12g00823 Cpe-Chr12:7341391 Cpe02g01582 Cpe-Chr2:13335417 1.48E-115 wgd
Cpe02g01582 Cpe-Chr2:13335417 Cpe03g00867 Cpe-Chr3:5479933 2.24E-124 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01582 K02137 - tcc:18614630 323.168