Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g01596 | ATGGAGTTGGGTTTGAGGCTTGGAGATCAACAACAAACCCACAGCCACAACCCTAAGCTTCTTCCCTCTTTTTTTCATCCTCCGCCCATTCTTCACCTCGCTCTTCTTCCTCCTACTCCTACTCCTACTCCAGACGGCGGCGGTGGGGAATCTCCGAGAAACCCATATCTGTGCTCCTCGTTGGAGCTGGGATTGTATGAAGTGGAAGATCATCAGGGGAATAGCGACAGAGGTTGCTCTAGAGGTAGCGATGAAGATGATCAAATTTTGGGTTCCAGAAAGAAACTGCGGCTTTCCAGAGAACAGTCGGCGTTCCTTGAAGAGAGCTTCAAAGATCATCACACACTTTACCCTAAGCAAAAGGTAGAACTTGCAAGAAGGCTGAATCTTCGTCCACGCCAAGTAGAGGTGTGGTTTCAAAACAGACGAGCAAGAACCAAGCTGAAGCAAACCGAAGTTGACTGTGAGTACTTGAAAAACTGTTGCCAAACACTAACCCAACAAAACAGGAAGCTTCGAAAGGAGCTTCAAGATTTAAGAGCTTTGAAAACCACAGATTCTCTCTTCATGCATTCCCCCGCCACCACTCTCACCATGTGTGCGTCTTGTGAACGCGCCGCCGTTCTTCACCCGCTGAACTCCAAGGCTTCTGGGTTTTCGTTTACTACAAATGGGTCCTTTCCATTTTCACCAACTGATCCTTCTACACCCAAGAATTAG | 720 | 47.78 | MELGLRLGDQQQTHSHNPKLLPSFFHPPPILHLALLPPTPTPTPDGGGGESPRNPYLCSSLELGLYEVEDHQGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEESFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSFPFSPTDPSTPKN | 239 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 13425334 | 13427344 | - | Cp4.1LG02g15420.1 | Cpe02g01596 | 465545 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g01596 | 239 | SMART | halz | 149 | 192 | IPR003106 | GO:0006355|GO:0043565 | |
Cpe02g01596 | 239 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 | 68 | 226 | - | - | |
Cpe02g01596 | 239 | PANTHER | - | 68 | 226 | - | - | |
Cpe02g01596 | 239 | ProSiteProfiles | 'Homeobox' domain profile. | 89 | 149 | IPR001356 | GO:0003677 | |
Cpe02g01596 | 239 | SUPERFAMILY | Homeodomain-like | 86 | 150 | IPR009057 | - | |
Cpe02g01596 | 239 | Pfam | Homeodomain | 93 | 147 | IPR001356 | GO:0003677 | |
Cpe02g01596 | 239 | CDD | homeodomain | 93 | 150 | IPR001356 | GO:0003677 | |
Cpe02g01596 | 239 | ProSitePatterns | 'Homeobox' domain signature. | 124 | 147 | IPR017970 | GO:0000981|GO:0006355 | |
Cpe02g01596 | 239 | Gene3D | - | 97 | 147 | - | - | |
Cpe02g01596 | 239 | SMART | HOX_1 | 91 | 153 | IPR001356 | GO:0003677 | |
Cpe02g01596 | 239 | MobiDBLite | consensus disorder prediction | 31 | 45 | - | - | |
Cpe02g01596 | 239 | Pfam | Homeobox associated leucine zipper | 149 | 183 | IPR003106 | GO:0006355|GO:0043565 | |
Cpe02g01596 | 239 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
Cpe02g01596 | 239 | Coils | Coil | 162 | 185 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g01596 | Cpe-Chr2:13425334 | Cpe10g00508 | Cpe-Chr10:2995591 | 2.75E-63 | dispersed | |
Cpe12g00802 | Cpe-Chr12:7237738 | Cpe02g01596 | Cpe-Chr2:13425334 | 6.17E-70 | wgd | |
Cpe17g00660 | Cpe-Chr17:5354676 | Cpe02g01596 | Cpe-Chr2:13425334 | 5.49E-68 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49108 | PF00046 | Homeodomain | 3.70E-15 | CL0123 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g01596 | K09338 | - | egr:104425500 | 215.698 |