Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01612 ATGGCGGATCTCAAAGAGCGGTTGCTTCCTCCGAAACCTGCATCTGCTATAAATGTTAGGGAGGCTGTTAATAATAGGCCATCGGCCTCCGGAAGGGTGCCATTTCAAGGTGTGGATGTTTTAGGGCTGAAGAAGCGAGGCCAGGGACTAAGATCTTGGATCCGGGTAGATTCCTCTGGGAACTCCCAGATTATTGAGATCGATAAGTTCACTGTGATGCGTCGTTGTGATCTACCTGCACGTGATTTGCGCCTGCTTGACCCTTTGTTTGTTTACCCTTCCACAATTCTTGGTAGAGAGAAGGCTATTGTGGTCAATCTGGAGCAGATTCGATGTATCATAACAGCCGATGAAGTTCTGCTGTTAAATTCCCTTGATAGTTATGTATTGCAGTATGTGGTAGAGCTACAAAGACGTTTGAAAACCACTGGGGTCGATGAGGTTTGGCAAAATGATGGAAATCATGGAGCTGACTTTAATCGAAGAAGAGGAAGTAGGAATTTCGATAATTTATTTGCAAACACCACCTCTCCTGATTATTTGCCCTTTGAGTTCAGGGCTTTAGAAGTCGCTTTGGAGGCAGCTTGTACATTTCTTGATTCCCAGGCTGCAGAATTAGAAATTGAAGCATATCCATTGCTAGATGAACTTACGTCGAAAATCAGTACATTAAATTTGGAGCGTGTCCGTCGCTTGAAAAGCAGACTTGTTGCCCTGACTCGTAGGGTTCAGAAGGTTAGGGATGAAATAGAGCAGCTCATGGATGATGATGGAGATATGGCAGAAATGTATCTCACCGAGAAGAAAATGAGAATGGAGTCCTTTGTTTATGGCGATCAGTCTGTGACTGGATACAGGCCAATCGATGGAGCATCTATTTCAGCTCCTGTTTCTCCTGTATCTTCACCGCCCGAAACTCGCAAGCTTGAGAAGAGCCTTAGCATTGCAAGGAGTCGGCACGAGAGCATGAGAAGTTCAGAAAGTGCCACTGAAAGTATAGAGGAGCTCGAGATGCTTCTTGAAGCATATTTTGTTGTCATTGACAGCACCTTGAACAAGTTGACATCGTTGAAGGAGTACATTGATGACACAGAAGATTTCATCAACATCCAGTTGGATAACGTACGGAATCAGTTGATCCAGTTTGAGCTACTGCTCACAACTGCAACATTCGTTGTTGCCATTTTTGGGGTGGTAGCTGGAATATTTGGCATGAATTTTGAAATATCAATGTTTGAGAATCCTGATGCATTCAAGTGGGTTCTTCTAATTACAGGCGTAAGTGGGATTATCATATTTTCTGCATTTGTTTGGTTTTTCAGATACAAAAGACTGATGCCACTTTAA 1347 43.36 MADLKERLLPPKPASAINVREAVNNRPSASGRVPFQGVDVLGLKKRGQGLRSWIRVDSSGNSQIIEIDKFTVMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLKTTGVDEVWQNDGNHGADFNRRRGSRNFDNLFANTTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKMRMESFVYGDQSVTGYRPIDGASISAPVSPVSSPPETRKLEKSLSIARSRHESMRSSESATESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEISMFENPDAFKWVLLITGVSGIIIFSAFVWFFRYKRLMPL 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13498264 13502150 + Cp4.1LG02g15350.1 Cpe02g01612 465561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01612 448 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 448 - -
Cpe02g01612 448 CDD Mrs2_Mfm1p-like 53 445 IPR039204 -
Cpe02g01612 448 Gene3D Magnesium transport protein CorA, transmembrane region 386 446 - -
Cpe02g01612 448 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 385 438 IPR045863 -
Cpe02g01612 448 Coils Coil 229 256 - -
Cpe02g01612 448 Pfam CorA-like Mg2+ transporter protein 337 436 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cpe02g01612 448 Gene3D - 41 124 - -
Cpe02g01612 448 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 448 IPR039204 -
Cpe02g01612 448 Gene3D Magnesium transport protein CorA, transmembrane region 125 379 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01612 Cpe03g00907 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01612 Cpe-Chr2:13498264 Cpe12g00161 Cpe-Chr12:1043975 5.09E-118 dispersed
Cpe04g00333 Cpe-Chr4:4076562 Cpe02g01612 Cpe-Chr2:13498264 1.07E-118 transposed
Cpe07g00089 Cpe-Chr7:430584 Cpe02g01612 Cpe-Chr2:13498264 3.75E-151 transposed
Cpe02g01612 Cpe-Chr2:13498264 Cpe03g00907 Cpe-Chr3:5828686 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01612 K16075 - csv:101217419 805.823