Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01619 TCCGGCCAAACAGTTTGTGTCACCGGTGCTGGTGGCTTCATTGCCTCGTGGCTCGTGAAGCTCCTTCTCCAAAAGGGTTACAACGTTAGAGGCACTGTCAGAAACCCAGGTGATTCGAAGAATGCTCATTTGAAAGAGCTTGATGGAGCTAAGGAAAGGCTAACGTTGTATGCTGCTGATCTTCTTCATTTTGAGAGCCTTAAAGCCGCCATTCTCGGCTCAATAATTGGAACGAAGAACGTCATAATGGCGGCGGCTGAGGCCAACGTCCGACGGGTTGTTTTCACATCGTCGATTGGGACCGTGCACATGAACCCTAATCGGAGCCCGGACATAGTGGTTGATGAGTCTTGTTGGAGTGACCTTGACTTTTGCAAAAACACTAAGACAATAGCAGAACAAACAGCATGGGCAATGGCAGAAGAAAAAGGGGTTGATCTAGTGGTGGTGAATCCAATGTTGGTGCTTGGACCATTACTACAACAAACAATAAATGCAAGTGTAGTTCATATAATGAAGTATTTGACAGGGTCAGTCAAGACCTATGTGAATGCAGTTCAAGGTTATGTTCATGTTAAGGATGTTGCAAAGGCTCACGTTTTGGTTTACGAGACTCCCTCAGCCTCCGGTAGATACATTTGTGCCGAAACTATGCTTCATCGCGCAGAATTGGTTGAAATTTTGGCTAATTTGTTTCCCGAGTATCCCGTTCCTACCAAGTGCTGTGATGAGAAGAACCCTAAGAAGAAAGCTTACAAATTTAGTGTAAAAAAGGTTAAGGACTTGGGCATGGCCGAGTTCATACCTGTGAAGCAATGCATATATGAAACTGTGAAGAGTCTTCAAGAGAAGGGTCATCTTCCAACTCAACCTCGTCAATCTATCACCTCTGCAGTTTCAGGCCACACGGTGTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCTTGGCTTGTGAAGCTCCTTCTCCAAAAGGGCTATACTGTTAGAGGAACTGTCAGAAACGCTGATGATCAAAAGAATGCTCATTTGAAAGAGCTGGAAGGAGCTAAAGAGAGGCTGTCTTTGTTCAGTGCTGATCTTCTTGATTTTGATAGCCTTAAAGCTGCCATTATTGGCTGCGATGGCGTCTTCCACACCGCCTCTCCGGTCACCGATGATCCCGAAAAGGTGGAACAAGCCATAATTGGGACAAAGAATGTCATGGCTGCTGCCGCCGAAGCAAAAGTTCGACGGGTAGTGTTCACGTCATCAATCGGTACCGTCTACATGAACCCTAACCGGAGCCCAGATACAGTGAATTGGTATTGCTATGCAAAGACAATAGCTGAACAGACAGCATGGGAAGTGGCAAAAGAACAAGGAGTGGATTTGGTAGTGGTGAATCCAATGCTGGTTTTGGGGCCTTTGCTGCAAGCTGGTGTGAATGCAAGTGTTGTTCATATAATGAAGTATCTGACAGGATCTGCAAAGACATATGTAAATGCTGTACAAGGTTACGTGGATGTTAAGGATGTTGCAAAAGCTCATGTTTTGGTCTATGAAACTCCTTCAGCTTCAGGCAGATACATTTGTGTGGAAAGCATGCTTCACCGTGGTGAATTGGTTGAGATTCTTACCAAGTTCTTCCCTGAATATCCCATTCCGACCAAGTGTTCTGATGAGGTGAATCCCAAGAAGAAACCTTACAAATACACTGTGGAGAAGCTGAAGTCATTGGGAATGGAGTTTACACCTATCAAACAATGCATATATGAAACTGTGAAGAGCTTACAAGAAAAGGGTCATCTTCCTCTTCCTTCCCAATTTCAACATTGA 1815 45.07 SGQTVCVTGAGGFIASWLVKLLLQKGYNVRGTVRNPGDSKNAHLKELDGAKERLTLYAADLLHFESLKAAILGSIIGTKNVIMAAAEANVRRVVFTSSIGTVHMNPNRSPDIVVDESCWSDLDFCKNTKTIAEQTAWAMAEEKGVDLVVVNPMLVLGPLLQQTINASVVHIMKYLTGSVKTYVNAVQGYVHVKDVAKAHVLVYETPSASGRYICAETMLHRAELVEILANLFPEYPVPTKCCDEKNPKKKAYKFSVKKVKDLGMAEFIPVKQCIYETVKSLQEKGHLPTQPRQSITSAVSGHTVCVTGAGGFIASWLVKLLLQKGYTVRGTVRNADDQKNAHLKELEGAKERLSLFSADLLDFDSLKAAIIGCDGVFHTASPVTDDPEKVEQAIIGTKNVMAAAAEAKVRRVVFTSSIGTVYMNPNRSPDTVNWYCYAKTIAEQTAWEVAKEQGVDLVVVNPMLVLGPLLQAGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVEILTKFFPEYPIPTKCSDEVNPKKKPYKYTVEKLKSLGMEFTPIKQCIYETVKSLQEKGHLPLPSQFQH 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13561534 13567072 - Cp4.1LG02g15140.1 Cpe02g01619 465568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01619 604 PANTHER CINNAMOYL-COA REDUCTASE 74 292 - -
Cpe02g01619 604 Gene3D - 296 604 - -
Cpe02g01619 604 Gene3D - 1 295 - -
Cpe02g01619 604 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 74 292 - -
Cpe02g01619 604 Pfam NAD dependent epimerase/dehydratase family 304 518 IPR001509 -
Cpe02g01619 604 Pfam NAD dependent epimerase/dehydratase family 5 208 IPR001509 -
Cpe02g01619 604 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 282 IPR036291 -
Cpe02g01619 604 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 298 591 IPR036291 -
Cpe02g01619 604 CDD FR_SDR_e 5 263 - -
Cpe02g01619 604 PANTHER CINNAMOYL-COA REDUCTASE 299 599 - -
Cpe02g01619 604 PANTHER CINNAMOYL-COA REDUCTASE 1 73 - -
Cpe02g01619 604 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 299 599 - -
Cpe02g01619 604 CDD FR_SDR_e 304 573 - -
Cpe02g01619 604 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 73 - -
Cpe02g01619 604 Coils Coil 332 352 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01619 Cpe-Chr2:13561534 Cpe03g00914 Cpe-Chr3:5911448 2.31E-168 dispersed
Cpe14g00711 Cpe-Chr14:4692992 Cpe02g01619 Cpe-Chr2:13561534 9.61E-20 transposed
Cpe12g00773 Cpe-Chr12:7020793 Cpe02g01619 Cpe-Chr2:13561534 6.75E-148 wgd
Cpe02g01619 Cpe-Chr2:13561534 Cpe03g00913 Cpe-Chr3:5889908 1.60E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01619 K09753 - csv:116401668 549.28