Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g01626 | ATGGCAAGACCTCAGCAGCGCTATCGAGGAGTCCGGCAAAGGCATTGGGGCTCTTGGGTCTCCGAGATTCGTCACCCTTTACTGAAGACAAGGATATGGCTGGGAACTTTCGAAACGGCGGAAGACGCAGCCAGAGCATACGACGAAGCAGCCAGAATCATGTGTTGCCCTAACAATCTCCCAACCAATCACAACTCGCCACGTCACTCTTTGTCCGCGCCGCCGCCGTCCTCGAACCTTCTAACCCCCACATTGATCGAGAAGTTGCAGAAATGTCGAACGGCTTCTTTCCAAATGGTCAAAAAGCAATTCCCAAACAAAACCCACTTCTCCGACCGGAAATCCGCTCACCCAAGTCGCCCTCACCCCACCAATCTCAACGACGGCTATGGTGCTTCCGGCGTTCACTTACCGGAAACGGACGCCAAGTGGGTCGCCGGCGGCGAGGCTCAGGAGATCGCCCGGCTTGAAGATGATCACGTAGAGCAAATGATCCAAGAATTGCTTGATCTTGGGTCATTTGAGTTTTGCCCTAATAATAATAATTATCTTAATGATATTGAGTCTACAAATAATTAA | 579 | 50.95 | MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNLPTNHNSPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSRPHPTNLNDGYGASGVHLPETDAKWVAGGEAQEIARLEDDHVEQMIQELLDLGSFEFCPNNNNYLNDIESTNN | 192 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 13608456 | 13609212 | + | Cp4.1LG02g15190.1 | Cpe02g01626 | 465575 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g01626 | 192 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 1 | 178 | - | - | |
Cpe02g01626 | 192 | MobiDBLite | consensus disorder prediction | 103 | 126 | - | - | |
Cpe02g01626 | 192 | CDD | AP2 | 6 | 55 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe02g01626 | 192 | Gene3D | AP2/ERF domain | 6 | 66 | IPR036955 | GO:0003700|GO:0006355 | |
Cpe02g01626 | 192 | PRINTS | Ethylene responsive element binding protein signature | 8 | 19 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe02g01626 | 192 | PRINTS | Ethylene responsive element binding protein signature | 30 | 46 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe02g01626 | 192 | SUPERFAMILY | DNA-binding domain | 7 | 56 | IPR016177 | GO:0003677 | |
Cpe02g01626 | 192 | SMART | rav1_2 | 7 | 67 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe02g01626 | 192 | Pfam | AP2 domain | 7 | 52 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe02g01626 | 192 | ProSiteProfiles | AP2/ERF domain profile. | 7 | 65 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe02g01626 | 192 | PANTHER | ETHYLENE RESPONSE FACTOR | 1 | 178 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g01626 | Cpe-Chr2:13608456 | Cpe11g00306 | Cpe-Chr11:1659772 | 7.93E-48 | dispersed | |
Cpe12g00767 | Cpe-Chr12:6986397 | Cpe02g01626 | Cpe-Chr2:13608456 | 1.33E-53 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49111 | PF00847 | AP2 | 3.50E-11 | CL0081 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g01626 | - | - | cmos:111452652 | 374.4 |