Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g01678 | ATGGATTTCTGGCCGGAATTTCTCGCTAGCAGTTGGGGAAAAGAGTTCGTCGGCGGCGGAATCGGCGGCGTTGCAGGCGTCGTCTCCGGCTACCCACTCGACACCCTCCGCATTCGTCAACAACACTCCACCTCCGGCTCCGCCCTCAGCGTCCTCCGCAACATCGTGTCCAATGGCGGCCCCACCGCTCTCTTCCGAGGAATGGGTGCTCCACTCGCTTCCGTCACTTTCCAGAACGCCGTTGTTTTCCAGACAAACGCCGTGCTCTGCAGTGTGATCGATCCGGCGGCGAGTCAAACCCGTCCGCCGTCGTACAAGGCGGTGGCATTAGGCGGATTCGGCACCGGAGCATTACAGAGCCTAATTTTAACACCCGTAGAGCTCGTCAAAATCCGTCTTCAATTACAGGATTTGGGAAATTCAAGCCACTCAGACGTGGGTTCGTCTCGGCCCGGGCCGATGCAGGTTGCGAAGAACATTTTCAAAACCGAAGGCTACAAAGGGCTATACAGAGGCTTAACGATCACGATGCTCAGAGACGCTCCTTCGCACTGTTTCTACTTTTGGACTTACCAATTCATGAGAGAAAAGCTTCATCCCGGCTGCAGAAACACCGGACAAGAGTCCTTGAGAACGATGATCGTCGCCGGCGGACTCGCCGGCGTCGCCAGTTGGGTTTGCTGTTACCCACTCGACGTTGTGAAAACCAGACTTCAAGCTCAGTCAAAAATTTCGTTTCAAAAGTACAATGGAATCATGGATTGTTTCTACAAGAGCGTCAAGGAAGAAGGGTACAGTGTTTTGTGGCGTGGATTGGGAACTGCCATTGCCAGAGCTTTTGTGGTTAATGGCGCCGTTTTCTCTGCTTATGAGCTCAGTTTGAGGTGTCTGTTCAGCAATGGCGGATTGCATACTGATCATACGATTTGA | 930 | 53.12 | MDFWPEFLASSWGKEFVGGGIGGVAGVVSGYPLDTLRIRQQHSTSGSALSVLRNIVSNGGPTALFRGMGAPLASVTFQNAVVFQTNAVLCSVIDPAASQTRPPSYKAVALGGFGTGALQSLILTPVELVKIRLQLQDLGNSSHSDVGSSRPGPMQVAKNIFKTEGYKGLYRGLTITMLRDAPSHCFYFWTYQFMREKLHPGCRNTGQESLRTMIVAGGLAGVASWVCCYPLDVVKTRLQAQSKISFQKYNGIMDCFYKSVKEEGYSVLWRGLGTAIARAFVVNGAVFSAYELSLRCLFSNGGLHTDHTI | 309 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 13881484 | 13882923 | + | Cp4.1LG02g14610.1 | Cpe02g01678 | 465627 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g01678 | 309 | Pfam | Mitochondrial carrier protein | 11 | 88 | IPR018108 | - | |
Cpe02g01678 | 309 | Pfam | Mitochondrial carrier protein | 212 | 299 | IPR018108 | - | |
Cpe02g01678 | 309 | Pfam | Mitochondrial carrier protein | 109 | 198 | IPR018108 | - | |
Cpe02g01678 | 309 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 1 | 299 | - | - | |
Cpe02g01678 | 309 | PRINTS | Mitochondrial carrier protein signature | 15 | 28 | IPR002067 | GO:0055085 | |
Cpe02g01678 | 309 | PRINTS | Mitochondrial carrier protein signature | 118 | 136 | IPR002067 | GO:0055085 | |
Cpe02g01678 | 309 | PRINTS | Mitochondrial carrier protein signature | 170 | 188 | IPR002067 | GO:0055085 | |
Cpe02g01678 | 309 | PRINTS | Mitochondrial carrier protein signature | 217 | 239 | IPR002067 | GO:0055085 | |
Cpe02g01678 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 103 | 197 | IPR018108 | - | |
Cpe02g01678 | 309 | SUPERFAMILY | Mitochondrial carrier | 11 | 291 | IPR023395 | - | |
Cpe02g01678 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 10 | 92 | IPR018108 | - | |
Cpe02g01678 | 309 | PANTHER | CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN | 1 | 299 | - | - | |
Cpe02g01678 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 208 | 296 | IPR018108 | - | |
Cpe02g01678 | 309 | Gene3D | Mitochondrial carrier domain | 12 | 301 | IPR023395 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe02g01678 | Cpe17g00563 | CCT | |
Cpe02g01678 | Cpe12g00690 | CCT | |
Cpe02g01678 | Cpe03g01111 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g01678 | Cpe-Chr2:13881484 | Cpe05g00181 | Cpe-Chr5:952949 | 3.12E-48 | dispersed | |
Cpe12g00690 | Cpe-Chr12:6562691 | Cpe02g01678 | Cpe-Chr2:13881484 | 1.29E-142 | wgd | |
Cpe17g00563 | Cpe-Chr17:4619591 | Cpe02g01678 | Cpe-Chr2:13881484 | 2.59E-147 | wgd | |
Cpe02g01678 | Cpe-Chr2:13881484 | Cpe03g01111 | Cpe-Chr3:9141112 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g01678 | K15109 | - | csv:101222749 | 558.91 |