Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01678 ATGGATTTCTGGCCGGAATTTCTCGCTAGCAGTTGGGGAAAAGAGTTCGTCGGCGGCGGAATCGGCGGCGTTGCAGGCGTCGTCTCCGGCTACCCACTCGACACCCTCCGCATTCGTCAACAACACTCCACCTCCGGCTCCGCCCTCAGCGTCCTCCGCAACATCGTGTCCAATGGCGGCCCCACCGCTCTCTTCCGAGGAATGGGTGCTCCACTCGCTTCCGTCACTTTCCAGAACGCCGTTGTTTTCCAGACAAACGCCGTGCTCTGCAGTGTGATCGATCCGGCGGCGAGTCAAACCCGTCCGCCGTCGTACAAGGCGGTGGCATTAGGCGGATTCGGCACCGGAGCATTACAGAGCCTAATTTTAACACCCGTAGAGCTCGTCAAAATCCGTCTTCAATTACAGGATTTGGGAAATTCAAGCCACTCAGACGTGGGTTCGTCTCGGCCCGGGCCGATGCAGGTTGCGAAGAACATTTTCAAAACCGAAGGCTACAAAGGGCTATACAGAGGCTTAACGATCACGATGCTCAGAGACGCTCCTTCGCACTGTTTCTACTTTTGGACTTACCAATTCATGAGAGAAAAGCTTCATCCCGGCTGCAGAAACACCGGACAAGAGTCCTTGAGAACGATGATCGTCGCCGGCGGACTCGCCGGCGTCGCCAGTTGGGTTTGCTGTTACCCACTCGACGTTGTGAAAACCAGACTTCAAGCTCAGTCAAAAATTTCGTTTCAAAAGTACAATGGAATCATGGATTGTTTCTACAAGAGCGTCAAGGAAGAAGGGTACAGTGTTTTGTGGCGTGGATTGGGAACTGCCATTGCCAGAGCTTTTGTGGTTAATGGCGCCGTTTTCTCTGCTTATGAGCTCAGTTTGAGGTGTCTGTTCAGCAATGGCGGATTGCATACTGATCATACGATTTGA 930 53.12 MDFWPEFLASSWGKEFVGGGIGGVAGVVSGYPLDTLRIRQQHSTSGSALSVLRNIVSNGGPTALFRGMGAPLASVTFQNAVVFQTNAVLCSVIDPAASQTRPPSYKAVALGGFGTGALQSLILTPVELVKIRLQLQDLGNSSHSDVGSSRPGPMQVAKNIFKTEGYKGLYRGLTITMLRDAPSHCFYFWTYQFMREKLHPGCRNTGQESLRTMIVAGGLAGVASWVCCYPLDVVKTRLQAQSKISFQKYNGIMDCFYKSVKEEGYSVLWRGLGTAIARAFVVNGAVFSAYELSLRCLFSNGGLHTDHTI 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13881484 13882923 + Cp4.1LG02g14610.1 Cpe02g01678 465627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01678 309 Pfam Mitochondrial carrier protein 11 88 IPR018108 -
Cpe02g01678 309 Pfam Mitochondrial carrier protein 212 299 IPR018108 -
Cpe02g01678 309 Pfam Mitochondrial carrier protein 109 198 IPR018108 -
Cpe02g01678 309 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 299 - -
Cpe02g01678 309 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Cpe02g01678 309 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Cpe02g01678 309 PRINTS Mitochondrial carrier protein signature 170 188 IPR002067 GO:0055085
Cpe02g01678 309 PRINTS Mitochondrial carrier protein signature 217 239 IPR002067 GO:0055085
Cpe02g01678 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 197 IPR018108 -
Cpe02g01678 309 SUPERFAMILY Mitochondrial carrier 11 291 IPR023395 -
Cpe02g01678 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Cpe02g01678 309 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 299 - -
Cpe02g01678 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 296 IPR018108 -
Cpe02g01678 309 Gene3D Mitochondrial carrier domain 12 301 IPR023395 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01678 Cpe17g00563 CCT
Cpe02g01678 Cpe12g00690 CCT
Cpe02g01678 Cpe03g01111 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01678 Cpe-Chr2:13881484 Cpe05g00181 Cpe-Chr5:952949 3.12E-48 dispersed
Cpe12g00690 Cpe-Chr12:6562691 Cpe02g01678 Cpe-Chr2:13881484 1.29E-142 wgd
Cpe17g00563 Cpe-Chr17:4619591 Cpe02g01678 Cpe-Chr2:13881484 2.59E-147 wgd
Cpe02g01678 Cpe-Chr2:13881484 Cpe03g01111 Cpe-Chr3:9141112 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01678 K15109 - csv:101222749 558.91