Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01683 CGAATATCTAACAGTCAACCTCTACCAGTCTCTCTCTACAAAGAAAGCAAAACCCCACTGAGCTCAGCCATTTTGTTGTCATGTCCTTTAAATCTTCTACTCTTCTTCTTCTTCACTTGTCTGCATCTTAATTTCTTCTCTTTAAATCAATCCCTTCTTTTTACACCTTCCATGCTCGCCGACATGTCGAACAATAATAATCGCCTCGCTTTCACCAAAGATTTCTTCTCCTCTCCCGCTCTTTCTCTTACTCTCGCGGGGATTTTTCGCCGGGGTGAGATGGCGGAGAAGGGCGATGTTGAGATGGAGGAGGTTGACGATGGCAGCGGAGAAGTGCGGCGGGATGATGCGGCGGAGGTTAGTAGCGAGAATTTGGGACCGGCTATTCAAGAGCGCCACGAAAACACATTGTTAAAAGCTGAAATGGAGAAACTTCGAGAAGAAAATAAAGCCATGAGAGAACTTACCAAGAAAAAAGTTGGCTGTCCAAATTGTGGCACTGCCAACGCTGCTGAAGACCGTACCGCCTTCACAACTACGGAGCAATTGCGTATTAAGAATGCAAAGCTCAAAGCCGAGCACTCGGAAACCACTCGCGATCATCGATCTCACCTTCATATTCGAGTTGCGACTCTGGCCGGAAGAAAAAGCACTTTGAAGTTGGCAGAGAGAATGAGTTCAAGCTTCTCCCAAGCAGTGGCAGCTTCAAGTTACCAAACATGGACCAAAGTGGTGGGCAAAACAGGGGAAGACATTAGGGTTTGTTCCAGGAAAAATCTAAGTGACCCTGGTGAACCCATTGGTGTCATTTTATGTGCAGTTTTTTCTCTATGGTTGCCTGTTCCTCCCCACACTCTCTTCCATTTCTTGCGAGACGAAGCTCGAAGGAACGAGTGGGACGCCATGTTCGGTGGAGATAAAGTTGAGTCAATTGCAAATTTGGCTAAAGGGCAGGATCGAGGCAACTCAGTTAGTATTCAAACAAGAGGATCAAAAGAGAGCAGCAGCATGTGGATTCTCCAAGACGCCTCCACAAACTCCTCGGAATCCATGGTAGTCTACTCCGGAGTAGACGTTGCCGGCATGCAGTCGGTGATGACAGGCTGTGATTCCGGCAGCCTCACAATCCTCCCATCGGGATTTTCAATTCTCCCCGACGGCGCTGAGTCCAGGTCCCTCCTCATCACTCGCCAGAAAGACCACAAATCTTCCGACACCCATGGTGGCGCGCTGCTGACCGCCGCCGTCCAAATTGTGACCGACGCCTCTCCCTCTGCAAAACCCACGGTGGATTCGGTTGAGTACGTTAAAAGCATCGTTTGTTGTACGATGAAAAATATCAGAAGCAGCCTGGGATGCTGTGAGGATGATTGTTGA 1377 48.66 RISNSQPLPVSLYKESKTPLSSAILLSCPLNLLLFFFFTCLHLNFFSLNQSLLFTPSMLADMSNNNNRLAFTKDFFSSPALSLTLAGIFRRGEMAEKGDVEMEEVDDGSGEVRRDDAAEVSSENLGPAIQERHENTLLKAEMEKLREENKAMRELTKKKVGCPNCGTANAAEDRTAFTTTEQLRIKNAKLKAEHSETTRDHRSHLHIRVATLAGRKSTLKLAERMSSSFSQAVAASSYQTWTKVVGKTGEDIRVCSRKNLSDPGEPIGVILCAVFSLWLPVPPHTLFHFLRDEARRNEWDAMFGGDKVESIANLAKGQDRGNSVSIQTRGSKESSSMWILQDASTNSSESMVVYSGVDVAGMQSVMTGCDSGSLTILPSGFSILPDGAESRSLLITRQKDHKSSDTHGGALLTAAVQIVTDASPSAKPTVDSVEYVKSIVCCTMKNIRSSLGCCEDDC 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13891719 13896517 - Cp4.1LG02g14580.1 Cpe02g01683 465632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01683 458 MobiDBLite consensus disorder prediction 99 122 - -
Cpe02g01683 458 Coils Coil 128 158 - -
Cpe02g01683 458 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 128 194 - -
Cpe02g01683 458 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 128 194 IPR042160 -
Cpe02g01683 458 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 209 453 - -
Cpe02g01683 458 SUPERFAMILY Bet v1-like 235 390 - -
Cpe02g01683 458 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 209 453 IPR042160 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01683 Cpe-Chr2:13891719 Cpe04g00733 Cpe-Chr4:7208678 1.99E-64 dispersed
Cpe17g00552 Cpe-Chr17:4565874 Cpe02g01683 Cpe-Chr2:13891719 6.20E-06 wgd
Cpe02g01683 Cpe-Chr2:13891719 Cpe03g01104 Cpe-Chr3:9115844 7.83E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01683 K09338 - csv:101221341 407.527