Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01695 ATGTTTTCGTCCATGAATCCTGTGCGAATTCGCACTTTGTTCTTTCTTCTCTACTTCTCCATTCTTCTTCAGCATCATTCCCTCTGTTCCTCATCTCCCTCGCCCTTAGCTTGTACGGATACAACCCGGTTATGCACCTCGTTTCTGGCTTTTAAGCCTCAGCCAAATCAGACGCTCTCTGTGATCCAGAGTATGTTCGACGTATTGCCTGAAGATGTCACTGTCGAAGGCAATGGCCGGGACTATGTGTTCATCAGGAAGAATTGCTCCTGTGCCTCTGGATTGAAGAAATACATCACCAATACCACTTTTACCATCAAATCGAATCGGGGTTTTGTGTATGACATAGTCTTGGAAGCGTATGATGGGCTTGCGCTGTTGCCCAACACCACCCGAATGGCGAGGAACGGCGCTGTTGTGTCTTTGCGGCTGTTTTGTGCCTGTTCAAGTGGGCTGTGGAACTATTTGATGAGCTATGTGATGAGGGATGGCGATACCATTCAGTCTTTGGCTAGCCGATTTGGGGTCAGTATGGATAGCATTGAGTCGGTGAATGGAATTCAAAATCCCAGCAATGTCACTGTGGGTGCTTTGTATTATATTCCCCTGAATTCGGTTCCTGGTGATCCTTATCCATTGGAGACCCACATTTCTCCTGCTCCTACTCCTGCTCCTTCCTATTCTCTCAACAATTTCTCAGATAATGCTGAGAACTCCAAGCGTCATCCTCCATATATATGGATTGTTGGAAGTTTGGGAATTATTCTTGTTCTGATTTTATTAGGCATAGGAGGTTATGCTTGTTGTAGGTGGTCGAAATGCTTTTCTAGATTAAGGAGTAGCCACTCCAAGGATCCTGGTGCCAAGGTTTCACACAAGTTCCATATTCTTGGGAAGTCAAGTTTCTGCTGTGCTTCAGGAAGGTATATTTGCTGTAGTTCTGCAGATTGGAAACAACCCAGCATGGAGTCGAGCGATAACCAGAGTGCAATTCCAAAAGCTATTGAGAGCAATGTATTCAATGTAGACAAACCTGTGGTTTTCTCCTGCGAAGAAATATTTTCCACGACCGATGGTTTCTCCGAGTCAAGTCTGCTTGGCCATGGAACTTATGGTTCAGTGTATCATGGCATCCTGCGTGACCAGGAAGTTGCTATAAAGAGAATGACTGCAACAAAAACTAAAGAGTTTCTGGCAGAGATGAAAGTCCTGTGCAAGGTTCATCATGCAAACCTGGTAGAATTGATTGGTTATGCAGCCAGTGAGGCGGAGCTGTTTCTAATTTATGAATATGCTCAAAAAGGTCCACTCAAAAGTCATTTACATGATCCTCTGAACAAGGATCTTATTTCTGACTTTGGGTTGGCCAAACTTGTTGGAAAAACTAACGAGGGTGAAGCTACAGTAACGAAAGTTGTGGGTACATATGGCTATCTGGCTCCTGAATATTTGAGTAACGGACTTGCTACAACTAAAAGCGACGTGTACGCTTACGGTGTTGTTCTTTTTGAGCTTATATCGGGAAAGGAGGCAATCATACGAACTGAGGGCACGAGTTTGAAAAATCCTGAAAGACGTTCGTTGGCATCCATTATGCTAGGTGTTCTTCGTAACACACCTGATCCTATGAATATGGGAAGTCTAAGAGATCAAGTTGATCCAAGTATGATGGATTTGTATCCTCATGACTGTCTATTCAAGGTGGCGATGTTGGGAAAGCAGTGTGTGGATGAGGATCCCATGTTACGACCGGACATGAAGGAAGTGGTGATATCGTTGTCACAGATCCTACTGTCTTCAATAGAGTGGGAAGCGACTCTAGCTGGTAACAGCCAAGTTTTCAGTGGTCTTGTCCAAGGAAGATAA 1866 44.37 MFSSMNPVRIRTLFFLLYFSILLQHHSLCSSSPSPLACTDTTRLCTSFLAFKPQPNQTLSVIQSMFDVLPEDVTVEGNGRDYVFIRKNCSCASGLKKYITNTTFTIKSNRGFVYDIVLEAYDGLALLPNTTRMARNGAVVSLRLFCACSSGLWNYLMSYVMRDGDTIQSLASRFGVSMDSIESVNGIQNPSNVTVGALYYIPLNSVPGDPYPLETHISPAPTPAPSYSLNNFSDNAENSKRHPPYIWIVGSLGIILVLILLGIGGYACCRWSKCFSRLRSSHSKDPGAKVSHKFHILGKSSFCCASGRYICCSSADWKQPSMESSDNQSAIPKAIESNVFNVDKPVVFSCEEIFSTTDGFSESSLLGHGTYGSVYHGILRDQEVAIKRMTATKTKEFLAEMKVLCKVHHANLVELIGYAASEAELFLIYEYAQKGPLKSHLHDPLNKDLISDFGLAKLVGKTNEGEATVTKVVGTYGYLAPEYLSNGLATTKSDVYAYGVVLFELISGKEAIIRTEGTSLKNPERRSLASIMLGVLRNTPDPMNMGSLRDQVDPSMMDLYPHDCLFKVAMLGKQCVDEDPMLRPDMKEVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR 621
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13949794 13953699 - Cp4.1LG02g14330.1 Cpe02g01695 465644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01695 621 SMART LysM_2 158 202 IPR018392 -
Cpe02g01695 621 Gene3D LysM domain 154 207 IPR036779 -
Cpe02g01695 621 PANTHER BNAA06G02020D PROTEIN 37 447 - -
Cpe02g01695 621 ProSitePatterns Protein kinases ATP-binding region signature. 366 387 IPR017441 GO:0005524
Cpe02g01695 621 CDD LysM 158 201 IPR018392 -
Cpe02g01695 621 SUPERFAMILY Protein kinase-like (PK-like) 344 593 IPR011009 -
Cpe02g01695 621 Gene3D Phosphorylase Kinase; domain 1 332 431 - -
Cpe02g01695 621 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 37 447 IPR044812 GO:0019199|GO:0045087
Cpe02g01695 621 SUPERFAMILY LysM domain 157 202 IPR036779 -
Cpe02g01695 621 ProSiteProfiles Protein kinase domain profile. 360 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01695 621 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 450 621 IPR044812 GO:0019199|GO:0045087
Cpe02g01695 621 Gene3D Transferase(Phosphotransferase) domain 1 433 607 - -
Cpe02g01695 621 Pfam Protein tyrosine and serine/threonine kinase 364 444 IPR001245 GO:0004672|GO:0006468
Cpe02g01695 621 Pfam LysM domain 159 196 IPR018392 -
Cpe02g01695 621 PANTHER BNAA06G02020D PROTEIN 450 621 - -
Cpe02g01695 621 ProSiteProfiles LysM domain profile. 157 201 IPR018392 -
Cpe02g01695 621 Pfam Protein kinase domain 450 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01695 Cpe03g01094 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01695 Cpe-Chr2:13949794 Cpe04g00716 Cpe-Chr4:7076933 1.13E-51 dispersed
Cpe02g01695 Cpe-Chr2:13949794 Cpe03g01094 Cpe-Chr3:9027335 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62247 PF00069 Pkinase 1.00E-14 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01695 - - csv:101213624 1068.14