Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01697 ATGGGAAAGGCGATGAGATTGTTTAGGGCCTTATTGGGAATGAGGAGAGACAAGAATGCCGATCACAATTCATGTTTACCTGCCGATGGTGAAAACCAAGAGAGGAATCGGTGCAGTTTTTCAAAATCCGGGAAGGAATTCACCGGCGAAGTTCCGAAGCTGCCACCGCCGCCGAGAATGGCGGATGCTGATTGGCAGAGATCTTGTCCTGCACAGGAACAGCGTAATGAGCATGCGATCGCTGTCGCAGCAGCATCGGCTGCTGCTGCTGATGCTGCTGTGGCGGCGGCTCAAGCGGCGGTGGCGGTTGTTATGCTTACCAACCAAACTAGAGGAGGTGGTTTGTTCAATGGAGGGAAACTGATTTCGGCTGCTCTCACAATTCAAAAGGTTTTCAGAGGCTTTTTGGCAAGGAAGGCACTTCAAGCATTAAGAAGTTTGGTCAAATTACAAGCTTTAGTTAGAGGCTTTCTCGTTCGAAAACGAGCAGCCGCCACATTACAGAGCATGCAAGCTCTAATCCGAGCACAAACCACCGTCCGATCGCAACGAGCTCGTCGTTCAAACAACAAAGAGAACAAATCCCTGCTGGAAAAGTCTCCGGATATCGGCGACGTGAGATTTCTTTTCTCGGACGAAATCGAAGACCCCAAAATCGTGGAAATCGACAAACTATTCCAGAAACCCAAATCGAGGTCCCGTCATTTCAACAATCTCCTCTCGGAGCTTGCCGACGACCGGCCGTCGCCGTACCTCTGGACAATGGCGTCGCCGGCCAGATTCTCAGGCGGGGAGTGGTGTTTCACCGGCGGAGAGGAGTGTGGGAGAATGTCGACAGCCCAGAGCACGCCGCGTGTGCGGAACTACGGGTGGACGACGGCGGCGGCAACAGCGACGCCGGCAAGGGTGGTGTACGGCGAAGGGTTTTTCCGTCCGTTTACGAATTTTCCGAATTATATGGCGAGTACGAAATCGTTTAAGGCGAAATCGAGGTCGCGAAGCGCGCCGAAACAGAGGGCGGAGGGTTGGACGAAGAACAGAGTGGCGTTGAATGAGATTATGGGAGGCAGGAACAGCACCAGTGGCGTGAGAATGCAGAAATGTTGTAATCGGATTGAAGGAGATGAAGGGTTTGATGAATTCTGA 1146 52.44 MGKAMRLFRALLGMRRDKNADHNSCLPADGENQERNRCSFSKSGKEFTGEVPKLPPPPRMADADWQRSCPAQEQRNEHAIAVAAASAAAADAAVAAAQAAVAVVMLTNQTRGGGLFNGGKLISAALTIQKVFRGFLARKALQALRSLVKLQALVRGFLVRKRAAATLQSMQALIRAQTTVRSQRARRSNNKENKSLLEKSPDIGDVRFLFSDEIEDPKIVEIDKLFQKPKSRSRHFNNLLSELADDRPSPYLWTMASPARFSGGEWCFTGGEECGRMSTAQSTPRVRNYGWTTAAATATPARVVYGEGFFRPFTNFPNYMASTKSFKAKSRSRSAPKQRAEGWTKNRVALNEIMGGRNSTSGVRMQKCCNRIEGDEGFDEF 381
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 13961624 13963178 + Cp4.1LG02g14390.1 Cpe02g01697 465646
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01697 381 PANTHER IQ-DOMAIN 5-RELATED 1 372 - -
Cpe02g01697 381 Pfam Protein of unknown function (DUF4005) 283 352 IPR025064 -
Cpe02g01697 381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 163 IPR027417 -
Cpe02g01697 381 MobiDBLite consensus disorder prediction 19 70 - -
Cpe02g01697 381 Gene3D - 119 174 - -
Cpe02g01697 381 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Cpe02g01697 381 Pfam IQ calmodulin-binding motif 146 162 IPR000048 GO:0005515
Cpe02g01697 381 Pfam IQ calmodulin-binding motif 123 141 IPR000048 GO:0005515
Cpe02g01697 381 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Cpe02g01697 381 PANTHER - 1 372 - -
Cpe02g01697 381 SMART iq_5 143 164 IPR000048 GO:0005515
Cpe02g01697 381 SMART iq_5 120 142 IPR000048 GO:0005515
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01697 Cpe-Chr2:13961624 Cpe03g01460 Cpe-Chr3:11630733 3.93E-33 dispersed
Cpe12g00644 Cpe-Chr12:6309281 Cpe02g01697 Cpe-Chr2:13961624 2.30E-59 wgd
Cpe17g00525 Cpe-Chr17:4376627 Cpe02g01697 Cpe-Chr2:13961624 2.66E-57 wgd
Cpe18g00396 Cpe-Chr18:5187816 Cpe02g01697 Cpe-Chr2:13961624 2.31E-63 wgd
Cpe02g01697 Cpe-Chr2:13961624 Cpe03g01092 Cpe-Chr3:9011328 1.95E-171 wgd
Cpe02g01697 Cpe-Chr2:13961624 Cpe04g01092 Cpe-Chr4:9504874 4.29E-71 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01697 - - csv:101221170 481.87