Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g01697 | ATGGGAAAGGCGATGAGATTGTTTAGGGCCTTATTGGGAATGAGGAGAGACAAGAATGCCGATCACAATTCATGTTTACCTGCCGATGGTGAAAACCAAGAGAGGAATCGGTGCAGTTTTTCAAAATCCGGGAAGGAATTCACCGGCGAAGTTCCGAAGCTGCCACCGCCGCCGAGAATGGCGGATGCTGATTGGCAGAGATCTTGTCCTGCACAGGAACAGCGTAATGAGCATGCGATCGCTGTCGCAGCAGCATCGGCTGCTGCTGCTGATGCTGCTGTGGCGGCGGCTCAAGCGGCGGTGGCGGTTGTTATGCTTACCAACCAAACTAGAGGAGGTGGTTTGTTCAATGGAGGGAAACTGATTTCGGCTGCTCTCACAATTCAAAAGGTTTTCAGAGGCTTTTTGGCAAGGAAGGCACTTCAAGCATTAAGAAGTTTGGTCAAATTACAAGCTTTAGTTAGAGGCTTTCTCGTTCGAAAACGAGCAGCCGCCACATTACAGAGCATGCAAGCTCTAATCCGAGCACAAACCACCGTCCGATCGCAACGAGCTCGTCGTTCAAACAACAAAGAGAACAAATCCCTGCTGGAAAAGTCTCCGGATATCGGCGACGTGAGATTTCTTTTCTCGGACGAAATCGAAGACCCCAAAATCGTGGAAATCGACAAACTATTCCAGAAACCCAAATCGAGGTCCCGTCATTTCAACAATCTCCTCTCGGAGCTTGCCGACGACCGGCCGTCGCCGTACCTCTGGACAATGGCGTCGCCGGCCAGATTCTCAGGCGGGGAGTGGTGTTTCACCGGCGGAGAGGAGTGTGGGAGAATGTCGACAGCCCAGAGCACGCCGCGTGTGCGGAACTACGGGTGGACGACGGCGGCGGCAACAGCGACGCCGGCAAGGGTGGTGTACGGCGAAGGGTTTTTCCGTCCGTTTACGAATTTTCCGAATTATATGGCGAGTACGAAATCGTTTAAGGCGAAATCGAGGTCGCGAAGCGCGCCGAAACAGAGGGCGGAGGGTTGGACGAAGAACAGAGTGGCGTTGAATGAGATTATGGGAGGCAGGAACAGCACCAGTGGCGTGAGAATGCAGAAATGTTGTAATCGGATTGAAGGAGATGAAGGGTTTGATGAATTCTGA | 1146 | 52.44 | MGKAMRLFRALLGMRRDKNADHNSCLPADGENQERNRCSFSKSGKEFTGEVPKLPPPPRMADADWQRSCPAQEQRNEHAIAVAAASAAAADAAVAAAQAAVAVVMLTNQTRGGGLFNGGKLISAALTIQKVFRGFLARKALQALRSLVKLQALVRGFLVRKRAAATLQSMQALIRAQTTVRSQRARRSNNKENKSLLEKSPDIGDVRFLFSDEIEDPKIVEIDKLFQKPKSRSRHFNNLLSELADDRPSPYLWTMASPARFSGGEWCFTGGEECGRMSTAQSTPRVRNYGWTTAAATATPARVVYGEGFFRPFTNFPNYMASTKSFKAKSRSRSAPKQRAEGWTKNRVALNEIMGGRNSTSGVRMQKCCNRIEGDEGFDEF | 381 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 13961624 | 13963178 | + | Cp4.1LG02g14390.1 | Cpe02g01697 | 465646 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g01697 | 381 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 372 | - | - | |
Cpe02g01697 | 381 | Pfam | Protein of unknown function (DUF4005) | 283 | 352 | IPR025064 | - | |
Cpe02g01697 | 381 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 121 | 163 | IPR027417 | - | |
Cpe02g01697 | 381 | MobiDBLite | consensus disorder prediction | 19 | 70 | - | - | |
Cpe02g01697 | 381 | Gene3D | - | 119 | 174 | - | - | |
Cpe02g01697 | 381 | ProSiteProfiles | IQ motif profile. | 145 | 172 | IPR000048 | GO:0005515 | |
Cpe02g01697 | 381 | Pfam | IQ calmodulin-binding motif | 146 | 162 | IPR000048 | GO:0005515 | |
Cpe02g01697 | 381 | Pfam | IQ calmodulin-binding motif | 123 | 141 | IPR000048 | GO:0005515 | |
Cpe02g01697 | 381 | ProSiteProfiles | IQ motif profile. | 121 | 149 | IPR000048 | GO:0005515 | |
Cpe02g01697 | 381 | PANTHER | - | 1 | 372 | - | - | |
Cpe02g01697 | 381 | SMART | iq_5 | 143 | 164 | IPR000048 | GO:0005515 | |
Cpe02g01697 | 381 | SMART | iq_5 | 120 | 142 | IPR000048 | GO:0005515 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe02g01697 | Cpe12g00644 | CCT | |
Cpe02g01697 | Cpe17g00525 | CCT | |
Cpe02g01697 | Cpe12g00644 | ECH | |
Cpe02g01697 | Cpe17g00525 | ECH | |
Cpe02g01697 | Cpe03g01092 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g01697 | Cpe-Chr2:13961624 | Cpe03g01460 | Cpe-Chr3:11630733 | 3.93E-33 | dispersed | |
Cpe12g00644 | Cpe-Chr12:6309281 | Cpe02g01697 | Cpe-Chr2:13961624 | 2.30E-59 | wgd | |
Cpe17g00525 | Cpe-Chr17:4376627 | Cpe02g01697 | Cpe-Chr2:13961624 | 2.66E-57 | wgd | |
Cpe18g00396 | Cpe-Chr18:5187816 | Cpe02g01697 | Cpe-Chr2:13961624 | 2.31E-63 | wgd | |
Cpe02g01697 | Cpe-Chr2:13961624 | Cpe03g01092 | Cpe-Chr3:9011328 | 1.95E-171 | wgd | |
Cpe02g01697 | Cpe-Chr2:13961624 | Cpe04g01092 | Cpe-Chr4:9504874 | 4.29E-71 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g01697 | - | - | csv:101221170 | 481.87 |