Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01700 ATGGGTTGTGTTCTGGGAAAGTGCTGTACTTGCAATCGCTACACGGCGTCTTCTGAAAGCGATATGGCCCAATTTTGTGATGCCTCGCCGTGTGGTTCACGGGGGAAACATATACTAACGGGAAGGTCATTGGAGTGTGTTCGTGTGCCTTCTCACAACTACTATATGGAGTACTCGCTCCTGACCCAGCGCGGCTACTACCCTGATTCCCCTGATAAAGGAAACCAAGATAGCGTCTGTGTTAGTACGAAAATTCGAGGTAACCCAAATATCCATTTCTTCGGTGTTTTTGATGGGCATGGTCAATACGGATCGGAGTGTTCGAATTTCGTTAAGGAAAGGGTCGTGCAAATACTATGTAAAGATTCAGCGTTGTCGCAAGATCCCGTTAGAGCTTATAATGCGGCCTTTTTTACCACGAATGATGAGTTGCATAAGAGCAAGATCGATGATTCCTTGAGTGGCACAACTGCTATTACTGTTCTTGTTGTTGGGAATATGCTTTACGTTGCGAATGTGGGTGATTCGAGGGCAGTGATAGCTGTTAAAGATGGGAATCGAATTATTGCTAAGGACATGTCCAATGATCAAACACCTTTTAGGAAGGATGAATGCGAGAGAGTAAAGCTGGCCGGGGCTACTGTGATGACAATTGATCAAATTGAAGGGCATAAGGATCCGGGTATTCAGATATGGGGTGATGAGGAGAGCCAGGGAAATGATCCACCTCGGCTGTGGTTGCCTAATAGCTTCTATCCTGGTACTGCATTCACTCGGAGTGTTGGAGATAGTACAGCCGAGAAGATTGGTGTCACTGCTGTCCCTGAGATTTCAGTACTTCAGCTCACTCAAAACCATCTTTTCTTCGTTGTTGCAAGCGATGGAGTGTTCGAGTTCCTTACGAGTCAAGCAATTGTCGATATGGCTGCGAGGTACACCGACCCACGAGATGCTTGCGCTGCCATTGCTGGAGAGTCATACAAGCTATGGTTGAGGCATGAAAACCGGACAGATGATATAACAATCATCATCGTTCACATCAAAGGCATCTCTGATGCAGATGCTGTTGCAACTGCTGGGCTGAACGGGGTCCATTCAAGGCATAGAATTATCGAGCGGGGAACCTCCGAGAGATCAGCCTTTGCTGGAAGTTCGGAGGCCTTTCGATCCATCAGAAGTGATTTCTCAGATGCGTCAATCTCCCAGCATCATGTGGGTTTGATGCACAGAAGCACAGCAATTGTAGTTCCATCTCCTTCTCAGCACCGACCATTGGAAGTGGAAGTGGGCTAA 1293 47.1 MGCVLGKCCTCNRYTASSESDMAQFCDASPCGSRGKHILTGRSLECVRVPSHNYYMEYSLLTQRGYYPDSPDKGNQDSVCVSTKIRGNPNIHFFGVFDGHGQYGSECSNFVKERVVQILCKDSALSQDPVRAYNAAFFTTNDELHKSKIDDSLSGTTAITVLVVGNMLYVANVGDSRAVIAVKDGNRIIAKDMSNDQTPFRKDECERVKLAGATVMTIDQIEGHKDPGIQIWGDEESQGNDPPRLWLPNSFYPGTAFTRSVGDSTAEKIGVTAVPEISVLQLTQNHLFFVVASDGVFEFLTSQAIVDMAARYTDPRDACAAIAGESYKLWLRHENRTDDITIIIVHIKGISDADAVATAGLNGVHSRHRIIERGTSERSAFAGSSEAFRSIRSDFSDASISQHHVGLMHRSTAIVVPSPSQHRPLEVEVG 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13968874 13972735 + Cp4.1LG02g14360.1 Cpe02g01700 465649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01700 430 CDD PP2Cc 65 347 IPR001932 -
Cpe02g01700 430 SMART PP2C_4 57 345 IPR001932 -
Cpe02g01700 430 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 36 428 - -
Cpe02g01700 430 Pfam Protein phosphatase 2C 85 322 IPR001932 -
Cpe02g01700 430 Gene3D - 50 349 IPR036457 -
Cpe02g01700 430 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 36 428 - -
Cpe02g01700 430 ProSiteProfiles PPM-type phosphatase domain profile. 57 347 IPR001932 -
Cpe02g01700 430 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169
Cpe02g01700 430 SUPERFAMILY PP2C-like 45 349 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01700 Cpe-Chr2:13968874 Cpe12g00239 Cpe-Chr12:1606039 1.77E-179 dispersed
Cpe02g01700 Cpe-Chr2:13968874 Cpe03g01405 Cpe-Chr3:11329796 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01700 - - csv:101212684 698.353