Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01720 ATGACAGTTCACGGAAAGCATAAGTTCTTCCACGGCACGCTCGAATGTATATTTTCTGGAGGAAAGCAAAGCTATGTGACCATCAAGATAAACAACATAGAGGTTGCTCGGACAAACCACGAATATGACCGTGTTTGGAACCAAACATTCCGAGTTCTATGTGCGCATCCATTGACATCTACCATCACCATTACAATGAGAACATCTCGTTCTGTATTGGGAAGATTCCAGATCCAGGCCCAACAGATTTTGAAAGAATCAAGTTTCATCAATGGATTCTTTCCACTTCTTATGGAAAATGGGAAGCCGAGTCCAGAGCTCAGACTTAGATTCATGCTATGGTTTCAACCGGCAGTATATGAACTAAGTTGGAAAAAGGTGCTGGAAAATGGAGAGTACAAGGGGCTGAGAAATGCAACGTTTCCTCTAAGGTCCAACTGTCATGTGACTCTATATCAAGATGCTCACCATGTCTCTACGTTTCAACCTCCGTTTCACGGTTCGAGTGCGCCGAGAAGGCTATGGGAAGATGTGTATAAGGCCATAGATAATGCAAAGCATTTGGTTTACATTGCAGGCTGGTCCTTCAATCCAAAGATGGTGCTGGTAAGAGACCCTCAAACTGACATACCCTATGCCTTGGGAGTAAAGCTTGGTGAGTTGTTGAAGCAGAAGGCAGAGGAAGGAGTAGCAGTGAGACTAATGATATGGGACGACGAGACATCCCTTCCCGTCATCAAGAATGCTGGGATAATGAAAACACATGATGAAGATGCTCGGGCATATTTCTCGAACTCGAAAGTTGTATGTAGGTTGTGCCCCAAATTACATCCTATGTCTCCACCAATTTTCTCTCATCATCAGAAGACCATAACAGTAGATGCTCAAACTCACATCAATGCAAGGAACAGGGAGATTATGAGTTTCATTGGGGGTCTAGATCTTTGTGATGGTCGCTATGACACAGAACAACATTCATTGTTCCATACTTTGAACACAGAATCCCACTGCTGTGATTTCTACCAAACGAGTATATCAGGAGCCAAGCTTCAAAAAGGAGGGCCAAGAGAGCCATGGCATGATGTTCATGCTCGGGTAACAGGTGAAGCTGCCTGGGATATACTAACAAACTTTGAGCAACGATGGACTAAGCAATCAGATGCTTCGTTGCTAGTCCCAACAAGCATCTTACTAAAACTGATGCCCCCACTTGAATCAAACACAAACCCACAAAAGGATTGGAACGTACAAGTTTTTCGATCTATCGACCACTTGTCTGCCAGCCAAGTTTTCAGAAACTTGACGGTTGAACGCACCATCCACGAGGCGTATGTCGAAGCTATCAGAAGAGCCGAGAGATTTATTTACATCGAAAACCAATATTTCATAGGAGGGTGTCACTTGTGGGACAAAGATCAACACTGCGGATGCACGAATTTAATACCGATCGAGATTGCGCTCAAGGTGGCTACTAAGATCAGGGCAAGGGAGAAGTTTGCAGTTTATGTAGTGATTCCAATGTGGCCAGAAGGGCCACCAGAGAGTGAATCAGTAGAGGATATGCTACATTGGACAAGGCAGACAATGACAATGATGTATAGATTGATTGGAGAAGCAATCCAAGAAACTGGGGAGAAGGCCCATCCAAGAGACTACTTGAATTTCTTTTGCCTTGCAAACAGAGAAGAAGAGAGAAAGTGGGACTTTGTTCCCCCTCACAGTCCACAACATGCAACAGAATACTGGAGTGCCCAACAACATAGAAGGTTTATGGTCTATGTCCATTCCAAGGTCATGATAGTGGACGATTTGTACATTCTGATCGGATCCGCAAACGTGAACCAAAGATCTATGGACGGAGAACGAGATACAGAAATAGCGATCGGATGCTACCAATTAGAAAACGACGGAAAAGAATTGCCAAATGGAAGAGACATTTCAACATTCCGCTTGTCGCTTTGGTACGAACATACTCAACGATTCGAAGAGGTGTTCTTAAACCCCGAAAACTTGCAATGCGTTGAAAGGGTTCGTTCAATAGCAGACGAATCGTGGAAAATTTACAGTGGAGAAGAAGTTGCAGACATGAAAGGTGTTCATCTCGTAACGTACCCTGTGAAGGTAAAACAGGACGGATCGATTGAGGATTTGGAAGAAAATGGAGGCCATTTTCCTGATACTAAATGCCCCATTAAAGGAAGAAGATCAATGTTCTTGCCGCCCATCTTCACGACCTAA 2238 43.88 MTVHGKHKFFHGTLECIFSGGKQSYVTIKINNIEVARTNHEYDRVWNQTFRVLCAHPLTSTITITMRTSRSVLGRFQIQAQQILKESSFINGFFPLLMENGKPSPELRLRFMLWFQPAVYELSWKKVLENGEYKGLRNATFPLRSNCHVTLYQDAHHVSTFQPPFHGSSAPRRLWEDVYKAIDNAKHLVYIAGWSFNPKMVLVRDPQTDIPYALGVKLGELLKQKAEEGVAVRLMIWDDETSLPVIKNAGIMKTHDEDARAYFSNSKVVCRLCPKLHPMSPPIFSHHQKTITVDAQTHINARNREIMSFIGGLDLCDGRYDTEQHSLFHTLNTESHCCDFYQTSISGAKLQKGGPREPWHDVHARVTGEAAWDILTNFEQRWTKQSDASLLVPTSILLKLMPPLESNTNPQKDWNVQVFRSIDHLSASQVFRNLTVERTIHEAYVEAIRRAERFIYIENQYFIGGCHLWDKDQHCGCTNLIPIEIALKVATKIRAREKFAVYVVIPMWPEGPPESESVEDMLHWTRQTMTMMYRLIGEAIQETGEKAHPRDYLNFFCLANREEERKWDFVPPHSPQHATEYWSAQQHRRFMVYVHSKVMIVDDLYILIGSANVNQRSMDGERDTEIAIGCYQLENDGKELPNGRDISTFRLSLWYEHTQRFEEVFLNPENLQCVERVRSIADESWKIYSGEEVADMKGVHLVTYPVKVKQDGSIEDLEENGGHFPDTKCPIKGRRSMFLPPIFTT 745
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14089946 14092886 + Cp4.1LG02g14220.1 Cpe02g01720 465669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01720 745 Pfam C2 domain 22 96 IPR000008 -
Cpe02g01720 745 Gene3D Endonuclease Chain A 429 636 - -
Cpe02g01720 745 Pfam Phospholipase D C terminal 662 734 IPR024632 -
Cpe02g01720 745 SUPERFAMILY Phospholipase D/nuclease 409 672 - -
Cpe02g01720 745 PANTHER PHOSPHOLIPASE D ALPHA 4 14 745 - -
Cpe02g01720 745 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 590 617 IPR001736 GO:0003824
Cpe02g01720 745 Pfam Phospholipase D Active site motif 593 617 IPR001736 GO:0003824
Cpe02g01720 745 Pfam Phospholipase D Active site motif 284 319 IPR001736 GO:0003824
Cpe02g01720 745 Gene3D Endonuclease Chain A 154 414 - -
Cpe02g01720 745 SUPERFAMILY Phospholipase D/nuclease 134 393 - -
Cpe02g01720 745 PIRSF PLD_plant 12 745 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cpe02g01720 745 SMART pld_4 590 617 IPR001736 GO:0003824
Cpe02g01720 745 SMART pld_4 284 319 IPR001736 GO:0003824
Cpe02g01720 745 PANTHER PHOSPHOLIPASE D 14 745 IPR015679 -
Cpe02g01720 745 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 22 113 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01720 Cpe-Chr2:14089946 Cpe11g00328 Cpe-Chr11:1747964 0 dispersed
Cpe11g00895 Cpe-Chr11:7223172 Cpe02g01720 Cpe-Chr2:14089946 9.09E-15 dispersed
Cpe12g00294 Cpe-Chr12:1945418 Cpe02g01720 Cpe-Chr2:14089946 1.50E-15 dispersed
Cpe17g00040 Cpe-Chr17:254675 Cpe02g01720 Cpe-Chr2:14089946 1.27E-15 dispersed
Cpe02g01720 Cpe-Chr2:14089946 Cpe11g00275 Cpe-Chr11:1476758 3.65E-179 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01720 K01115 - csv:101206396 1416.36