Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01730 ATGATGGAAGAGATGCCTTCTTCTGTTTCTTTGACCCTTAGTTTAGGCAATCCAAAGTCTGATACATCAGGAAGTCCTAGCCATGTCGAATTTACGCGGCTAAAGTTGGTGACAGACAAGGTAAATTTGTTCTCTGCATCGACCGCTGACTCGGGTCCTATTAGTAATGGTAGTTGCCATGGTTTTAGTGGTATAGTCGATAGCATAACCGTGTCGCAACCAAGTGATAGTAGTCAAGGTCGAGACGGTTTTTGGGGCTTGTTGCCGACGAATGGCGTAAGTTTGACTGTCGATAAGGAAGATGCTACCTTATCTACTATGGGTGACCCTGATGAAATGATAGATGATGGGTTGTTTGCTATTGATGGTGGTTCTAATCTTAATGTACAAGAAGTTGTCAAGATTGGAGATGTCAGTAATGGTCATGTTGTTGCCAAGGCTATTATCTTGGTGGAATCAGGGAAGACTCCTACTAGTGAACTTATCGTGGCAACAGTAAGCTCCGATTTAGAAGTATCGACATCGTCAGAGCTAAAAGTCCCTGCGGTGGTTTTCCAATCGAAAGGGGGAGATGGTGTTCATAAAGGCATTCGGAGTGTCTTTGAGCGGGATTGTGTACCCCTTTGGGGGTCGGTATCGATTTGTGGTAGAAGACCAGAAATGGAGGATGCAATTGCTGTGGTTCCTTGTTTTTCTAAGGTTCCTATCAGAATGCTTGTGGGAAATGGAATGCTTAATGGAATGGGTCAAAGTTTAACACATCTGAACAGCCATTTTTTTGGTGTTTATGATGGACATGGCGGCTCTCAGGTTGCGGATTATTGTCGAGAGCGCGTACATTTAGCATTAGCTGAAGAGATTAAAGGGTTTAAGCAAAATCTAAATAATGGAAGCAATGGAGAAAACTGGGAGAAGGATTGGGAGAGAACCTTTAACAATTGCTTTGTTAGAGTGGATGATGAAATAGAAGGAAAAGTTGGTAGCTTCAAACCTGTTGCCCCGGAAACTGTTGGCTCTACTGCCGTTGTTGCCTTGGTCTGTTCATCACACATCATAGTTGCAAACTGTGGTGATTCTAGAGCTGTTCTATGCCGTGGCAAAGAACCGATGGCGCTATCGGTCGATCATAAACCAAATCGTGAAGATGAATACGCTCGGATTGAATCGTCTGGAGGCAAGGTCATCCAGTGGAATGGACATCGTGTGTTCGGAGTTCTTGCAATGTCAAGATCCATTGGTGATAGATATTTGAAGCCATGGATCATTCCCGACCCGGAAGTCATGTTTGTTCCTCGAGCGAAAGAAGATGAATGTCTTATTTTAGCCAGTGATGGCCTGTGGGATGTGATGACAAATGAGGAAGTCTGCAAAGTGGCTCGAAGGCGGATTCTTCTTTGGCACAAAAAACACGGAGCTTCATCGCTCACGGATCGGGGCATGGGAGTTGACCCAGCTGCACAAGCTGCAGCAGATTACCTCTCAATGCTTGCTCTCCAAAAGGGAAGCAAAGACAACATCTCTGTGATTGTAGTAGACTTGAAAGCTCAAAGGAAGTTCAAGACCAAATCATGA 1572 44.53 MMEEMPSSVSLTLSLGNPKSDTSGSPSHVEFTRLKLVTDKVNLFSASTADSGPISNGSCHGFSGIVDSITVSQPSDSSQGRDGFWGLLPTNGVSLTVDKEDATLSTMGDPDEMIDDGLFAIDGGSNLNVQEVVKIGDVSNGHVVAKAIILVESGKTPTSELIVATVSSDLEVSTSSELKVPAVVFQSKGGDGVHKGIRSVFERDCVPLWGSVSICGRRPEMEDAIAVVPCFSKVPIRMLVGNGMLNGMGQSLTHLNSHFFGVYDGHGGSQVADYCRERVHLALAEEIKGFKQNLNNGSNGENWEKDWERTFNNCFVRVDDEIEGKVGSFKPVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYARIESSGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVMFVPRAKEDECLILASDGLWDVMTNEEVCKVARRRILLWHKKHGASSLTDRGMGVDPAAQAAADYLSMLALQKGSKDNISVIVVDLKAQRKFKTKS 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14166055 14169563 - Cp4.1LG02g17310.1 Cpe02g01730 465679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01730 523 CDD PP2Cc 210 513 IPR001932 -
Cpe02g01730 523 SMART PP2C_4 198 511 IPR001932 -
Cpe02g01730 523 Pfam Protein phosphatase 2C 234 506 IPR001932 -
Cpe02g01730 523 ProSitePatterns PPM-type phosphatase domain signature. 259 267 IPR000222 GO:0043169
Cpe02g01730 523 ProSiteProfiles PPM-type phosphatase domain profile. 208 513 IPR001932 -
Cpe02g01730 523 MobiDBLite consensus disorder prediction 7 27 - -
Cpe02g01730 523 MobiDBLite consensus disorder prediction 1 27 - -
Cpe02g01730 523 PANTHER PROTEIN PHOSPHATASE 2C 16 109 523 - -
Cpe02g01730 523 PANTHER ALPHABET, ISOFORM E-RELATED 109 523 - -
Cpe02g01730 523 SUPERFAMILY PP2C-like 201 514 IPR036457 -
Cpe02g01730 523 Gene3D - 195 523 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01730 Cpe03g01059 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01730 Cpe-Chr2:14166055 Cpe11g00360 Cpe-Chr11:1979639 3.02E-163 dispersed
Cpe04g01099 Cpe-Chr4:9547830 Cpe02g01730 Cpe-Chr2:14166055 9.17E-07 dispersed
Cpe14g00050 Cpe-Chr14:282020 Cpe02g01730 Cpe-Chr2:14166055 1.06E-75 transposed
Cpe02g01730 Cpe-Chr2:14166055 Cpe03g01059 Cpe-Chr3:8770583 0 wgd
Cpe02g01730 Cpe-Chr2:14166055 Cpe07g00568 Cpe-Chr7:3762139 1.00E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01730 K14497 - csv:101203499 923.694