Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01745 ATGAATTCAGGTCCAAAGCCCTGCATCTCTCCTTTCACACCAACTCAATGGCAAGAACTAGAACACCAAGCTCTCATATTCAAATACATGGTTTCAGGAGTACCTATCCCCCCTGATCTAATCTTCTCTGTGAAAAGAAGCTTGGATTCCTCCATTTCTGCAAGACTCTTCCCTCACCAACCCATTGGGTGGGGATGCTTTGAGATGGGTTTTGGCAGAAAAGCAGATCCTGAACCAGGAAGGTGCAGAAGAACAGATGGGAAAAAATGGAGATGCTCAAAAGAAGCTTATCCAGACTCCAAATACTGCGAGAGGCACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAATCTCTTCAACGCCACCAGCTCAAACGCCACCGCCTTTAATCCTCACTTCAACCCGGAGCCTCTCTGCTTCCTCCCCAACCTCCTCTTCCTATTCTCTCTCTACACTTTCCTCTTCTTCTTCTCTGACATGTGAAACTCAGTCCTATCACCAAACTCCTGCTCCTGCTGCTTATCAGGAATCCTCCATTCATCCATATTTGTATCCTCAATCATCATCCTCCAGACCTCCATGTTCTGATTTCTCTCCAAACAGTACAAACCCTCAACTCTTTTTGTACTCAGGGACTCATCCTCAAGCTGACAAAGACTACAGGGATATTAATGGTCCAAGAGAGGGTGTGGGCGTGCAGGCGTTCTTTCCCTCAGTTGCAGACTCTGCAAGAAGCATAGGTGAGGTTTATAGTCAGCCAATAGGGATGGATTCTTACAAAGGATTCTCCCATGCTGTTTCCAACAGCCACCAAATTTACAGTTCGAAACAGGCGAGGCAACAACAAGAGCAACACTGCTTTGTTTTGGGCACAGATTTTAATAAATCAACAAGATCAGCTAAAACAGAGGAAGAAGATGATGCAGAAACCCAGAAGCCACTACTCCACTTCTTTGAGGATTGCCCACCAAAAAACTCAGATTCCTGGCTTGATTTAGCCACAAATTCAAATGGTTAA 1026 45.42 MNSGPKPCISPFTPTQWQELEHQALIFKYMVSGVPIPPDLIFSVKRSLDSSISARLFPHQPIGWGCFEMGFGRKADPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEISSTPPAQTPPPLILTSTRSLSASSPTSSSYSLSTLSSSSSLTCETQSYHQTPAPAAYQESSIHPYLYPQSSSSRPPCSDFSPNSTNPQLFLYSGTHPQADKDYRDINGPREGVGVQAFFPSVADSARSIGEVYSQPIGMDSYKGFSHAVSNSHQIYSSKQARQQQEQHCFVLGTDFNKSTRSAKTEEEDDAETQKPLLHFFEDCPPKNSDSWLDLATNSNG 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14257197 14259554 - Cp4.1LG02g17610.1 Cpe02g01745 465694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01745 341 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cpe02g01745 341 MobiDBLite consensus disorder prediction 185 206 - -
Cpe02g01745 341 Pfam QLQ 11 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cpe02g01745 341 PANTHER GROWTH-REGULATING FACTOR 5 10 340 - -
Cpe02g01745 341 MobiDBLite consensus disorder prediction 132 151 - -
Cpe02g01745 341 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Cpe02g01745 341 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cpe02g01745 341 MobiDBLite consensus disorder prediction 320 341 - -
Cpe02g01745 341 Pfam WRC 77 119 IPR014977 -
Cpe02g01745 341 PANTHER - 10 340 IPR031137 GO:0005634|GO:0006351|GO:0032502
Cpe02g01745 341 MobiDBLite consensus disorder prediction 103 151 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01745 Cpe03g01046 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01745 Cpe-Chr2:14257197 Cpe16g00168 Cpe-Chr16:3771041 2.10E-56 dispersed
Cpe10g00498 Cpe-Chr10:2911162 Cpe02g01745 Cpe-Chr2:14257197 2.15E-36 dispersed
Cpe11g01195 Cpe-Chr11:9762295 Cpe02g01745 Cpe-Chr2:14257197 2.83E-62 wgd
Cpe18g00326 Cpe-Chr18:4738529 Cpe02g01745 Cpe-Chr2:14257197 1.25E-68 wgd
Cpe02g01745 Cpe-Chr2:14257197 Cpe03g01046 Cpe-Chr3:8513101 1.03E-175 wgd
Cpe02g01745 Cpe-Chr2:14257197 Cpe04g01028 Cpe-Chr4:9123274 4.65E-71 wgd
Cpe02g01745 Cpe-Chr2:14257197 Cpe07g01065 Cpe-Chr7:9480069 5.08E-24 wgd
Cpe02g01745 Cpe-Chr2:14257197 Cpe07g00530 Cpe-Chr7:3504740 3.67E-09 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49124 PF08879 WRC 1.80E-21 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01745 - - cmos:111452139 652.129