Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01749 ATGCAGCTTGTTTCCCACCATTTCTTGCTACTGGTATGCTTCTCTTTCCTTATCTATGTCGTTTCTGGTTTAACCTCCGATGGGTTGGCTTTATTGTCACTCCAAACCCGCTGGACTACCGACACCCCTTTTGTGCCTCCATGGAATGCTTCTCATTCCACTCCCTGTTCTTGGGCTGGGATTCAATGCGATAAAAACCTTCGTGTCACCACCTTGAATCTCTCTTCCCATGGGGTTTCAGGTCAGATTGGGCCCGAAATTGGGAATTTGACCCACTTGCGTACCATTGATTTGATATCCAACACTTTTTCTGGTGCAATTCCTTATGGGATAGGCAACTGTAGCCATTTAGAGTTCTTGGATCTCTCCCTTAACCAATTTGGTGGACAAGTTCCTCATTCCTTAACAAACCTTAGGAACTTGACGTTTTTGAACCTCCATTCCAATGTTCTAACAGGTGCAATACCCGACTCCTTATTTCAAATCCTGAATTTGCAGTATGTGTATCTTAGTGAAAATAGTCTCAACGGTTCTATTCCTTCCAATGTGGGGAATTTGAAGCAGCTGTTGCATTTGTATTTGTATGGAAATCAGTTGTCTGGAACCATACCTTCTTCCATAGGGAATTGTAGCCAATTACAGGATCTTTACTTGAACCAGAACCAGTTGGTGGGAGTGTTGCCCAATACCCTTAACCATCTTCATAATCTTGTGAATTTGGGTGTCAGCCACAACAATCTTGAGGGTCCAATTCCTTTGGGTTCCGGCAATTGCCAGAGTTTAGAATATATAGACTTGTCATTCAATGGTTATAGTGGAGGTATACCTGCTGGGCTGGGCAACTGTAGTGGCCTAACAACCTTGCTCATTGTAAATTCCAGCCTCACAGGTCATATTCCGTCCTCCATCGGTCAGTTAAGTAATCTTACAACTATCGATCTCTCTAAAAATCAACTATCAGGGAATATACCTTCCGAGTTTGGGGATTGCAAATCCTTGAAAGAACTGGATTTGTACGTCAACCAACTCGAGGGACGTATCCCGAATGAATTGGGTTTGCTACATGGATTAGAGGTCCTTCAATTGTTTTCAAATAGCTTGACTGGTGAGATTCCAATTAGCATCTGGAAGATTGCAAGTCTCCAGCATATTATTGTGTACAACAACAACCTTTCTGGGGAACTGCCCTTGATAATAACTGAGCTCAAGCACCTCAGAAATATATCTGTGTTTAACAACCAGTTTTCTGGAGTTATACCTCAAAGTCTGGGGCTCAACAGTAGTTTAGTGCAGGTGGAGTTCACTAATAACCAGTTCGTTGGTCGAATTCCACCTTATTTATGCTCGGGAAAGACATTACGCGTGTTAAATTTAGGTTTGAATCAATTTCAAGGTAGCGTACCTTCAGATATTGGAACATGTTCGACTCTTCAGAGGTTGATTTTGAGAAGGAATAATCTAATAGGGACCCTGCCAGAATTTAAGAGAAATCATGGCCTTCGGTTCGTGGATGCCAGTGAAAACAACCTGAATGGAACAATTCCCTCAAGTTTGGGAAATTGCATCAATCTCACCTCGATTAATTTGTCAAGCAACAAGCTTACAGGTCGTATACCTGATGAGTTGGGATATCTTGTGAACCTTCAAAGTTTGAGCTTGTCTCACAACATCTTGGATGGACCTTTACCATCTTCTCTGTCAAATTGTACCAAACTGGATAAGTTTGACGCAGGATTCAATTTATTGAACGGTTCTGTACCTCGTAGTTTAGCCAGCTGGAAAGTTATATCCACGTTGATATTAAAAGAGAATCGATTTACTGGAGGCATCCCGAACGTATTGTCAGAACTTGACAGCCTTTCACTGCTAGACCTTGGTGGCAATTTGTTTGGAGGTGAAATCCCTTCATCTCTTGGAGCATTGAAGAATCTGTTTTATTCCTTGAATCTCAGTAACAATGGGTTAACTGGCCAACTACCTTCTGAGCTAGCTAGTTTGGTCAAGCTTGGGGAGTTAGACATATCTCACAATAATTTGACTGGAAGTTTAAGCGTTCTTGGCGAACTAAGTTCATCCTTACTTGAGCTTAACATTTCTGATAATTTATTCACGGGTCCTGTGCCACAGACATTAATGAAGTTGCTGAATTCTGATCCCTCATTGTTCTCCGGTAACCCTGGGCTGTGCATCAGCTGTGATGGACTAGATGGCTTAAGTTGCAGCAGAACAAGCAGTATCAAACCCTGTGCTAGCCGTTCAAGCTCTCGTCTTAGCAATATACAAATTGCAATGATAGCTCTCGGAAGTTCGATCTTTATTGTTCTTTTGCTTCTCGGATTGGTTTATAAGTTTGTTTACAGAAGAAGAAACAAACAAAACATTGAGACCTCTGTTCAAGTGGGAGAAACTTCCTTGCTCAACAAGGTGATGGAGGCTACTGATAATCTAGATGAGCGGTTCGTCATCGGGAGAGGAGCACATGGCGTCGTTTATAAGGCTTCCCTAGATTCAAATAGAACTTTTGCTGTAAAGAAGCTTACATTTGTAGGATGTAAAGGGGGAAGGCAGAACATGGTTAAAGAAATTCGAACTGTTGGCAACATTAGGCACCGGAACTTGATCACTTTGGAAGACTTTTGGTTGGGAAAAGACCATGGTCTATTGCTTTACACATACCAGCCGAATGGAAGCCTTTATGATGTGCTGCATGGGATGAATCCATCTCCAGCTCTAACATGGAAAGTCCGGTATAATATAGCCACTGGTATTGCTCATGGATTGGCGTATCTTCATTACGATTGCGATCCTCCTATAATACACCGAGACATCAAACCGCAGAATATACTTCTAGATTCAGAGATGGAACCTCGTATCGCTGATTTCGGTCTTGCAAAGCTGCTGGATCAGACCTCTGCATCGACGACTTCTTCTTCTTTTGCGGGTACAATTGGCTACATTGCACCAGAGAATGCATTTTCAGCAGCAAAGAGCAAAGCTTCAGATGTGTACAGTTACGGGGTGGTTTTACTTGAGCTGATAACGGGAAAGAAGCCATCAGATGCATCATTTACGGAGTTCGGGAGTATCATGGCTTGGGTTCGGTCGGTATGGAACGAGACGGAGGAAATAGATAGAATTGTTGATCCAAGGCTGGTGGAAGAAGTTGTAAACTCTGATGAGAAGGAGCAGATTAAGCAGTTACTTATGGTGGTTTTGAGATGCACAGAAAGGGAGGCTAACAAGAGGCCAACAATGAGAGATGTAGTGAACCACTTGGTTGATTCAAACACAAGTCATGTCAGGAAATATGACTAA 3315 42.41 MQLVSHHFLLLVCFSFLIYVVSGLTSDGLALLSLQTRWTTDTPFVPPWNASHSTPCSWAGIQCDKNLRVTTLNLSSHGVSGQIGPEIGNLTHLRTIDLISNTFSGAIPYGIGNCSHLEFLDLSLNQFGGQVPHSLTNLRNLTFLNLHSNVLTGAIPDSLFQILNLQYVYLSENSLNGSIPSNVGNLKQLLHLYLYGNQLSGTIPSSIGNCSQLQDLYLNQNQLVGVLPNTLNHLHNLVNLGVSHNNLEGPIPLGSGNCQSLEYIDLSFNGYSGGIPAGLGNCSGLTTLLIVNSSLTGHIPSSIGQLSNLTTIDLSKNQLSGNIPSEFGDCKSLKELDLYVNQLEGRIPNELGLLHGLEVLQLFSNSLTGEIPISIWKIASLQHIIVYNNNLSGELPLIITELKHLRNISVFNNQFSGVIPQSLGLNSSLVQVEFTNNQFVGRIPPYLCSGKTLRVLNLGLNQFQGSVPSDIGTCSTLQRLILRRNNLIGTLPEFKRNHGLRFVDASENNLNGTIPSSLGNCINLTSINLSSNKLTGRIPDELGYLVNLQSLSLSHNILDGPLPSSLSNCTKLDKFDAGFNLLNGSVPRSLASWKVISTLILKENRFTGGIPNVLSELDSLSLLDLGGNLFGGEIPSSLGALKNLFYSLNLSNNGLTGQLPSELASLVKLGELDISHNNLTGSLSVLGELSSSLLELNISDNLFTGPVPQTLMKLLNSDPSLFSGNPGLCISCDGLDGLSCSRTSSIKPCASRSSSRLSNIQIAMIALGSSIFIVLLLLGLVYKFVYRRRNKQNIETSVQVGETSLLNKVMEATDNLDERFVIGRGAHGVVYKASLDSNRTFAVKKLTFVGCKGGRQNMVKEIRTVGNIRHRNLITLEDFWLGKDHGLLLYTYQPNGSLYDVLHGMNPSPALTWKVRYNIATGIAHGLAYLHYDCDPPIIHRDIKPQNILLDSEMEPRIADFGLAKLLDQTSASTTSSSFAGTIGYIAPENAFSAAKSKASDVYSYGVVLLELITGKKPSDASFTEFGSIMAWVRSVWNETEEIDRIVDPRLVEEVVNSDEKEQIKQLLMVVLRCTEREANKRPTMRDVVNHLVDSNTSHVRKYD 1104
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14276185 14279970 - Cp4.1LG02g17580.1 Cpe02g01749 465698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01749 1104 ProSitePatterns Protein kinases ATP-binding region signature. 822 845 IPR017441 GO:0005524
Cpe02g01749 1104 SMART LRR_sd22_2 234 266 - -
Cpe02g01749 1104 SMART LRR_sd22_2 186 212 - -
Cpe02g01749 1104 SMART LRR_sd22_2 545 571 - -
Cpe02g01749 1104 SMART LRR_sd22_2 306 338 - -
Cpe02g01749 1104 SMART LRR_sd22_2 666 691 - -
Cpe02g01749 1104 Pfam Leucine rich repeat 506 556 IPR001611 GO:0005515
Cpe02g01749 1104 Pfam Leucine rich repeat 284 343 IPR001611 GO:0005515
Cpe02g01749 1104 Gene3D Ribonuclease Inhibitor 23 173 IPR032675 -
Cpe02g01749 1104 SUPERFAMILY RNI-like 72 421 - -
Cpe02g01749 1104 PANTHER OS08G0446200 PROTEIN 205 303 - -
Cpe02g01749 1104 PANTHER OS08G0446200 PROTEIN 297 1099 - -
Cpe02g01749 1104 PANTHER OS08G0446200 PROTEIN 6 253 - -
Cpe02g01749 1104 Gene3D Transferase(Phosphotransferase) domain 1 894 1103 - -
Cpe02g01749 1104 ProSiteProfiles Leucine-rich repeat profile. 668 690 IPR001611 GO:0005515
Cpe02g01749 1104 Pfam Protein kinase domain 821 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01749 1104 SUPERFAMILY RNI-like 409 721 - -
Cpe02g01749 1104 SMART LRR_typ_2 545 569 IPR003591 -
Cpe02g01749 1104 SMART LRR_typ_2 211 233 IPR003591 -
Cpe02g01749 1104 SMART LRR_typ_2 234 258 IPR003591 -
Cpe02g01749 1104 SMART LRR_typ_2 666 689 IPR003591 -
Cpe02g01749 1104 SMART LRR_typ_2 617 641 IPR003591 -
Cpe02g01749 1104 SMART LRR_typ_2 138 162 IPR003591 -
Cpe02g01749 1104 SMART LRR_typ_2 90 114 IPR003591 -
Cpe02g01749 1104 SMART LRR_typ_2 186 210 IPR003591 -
Cpe02g01749 1104 SMART LRR_typ_2 306 330 IPR003591 -
Cpe02g01749 1104 Gene3D Ribonuclease Inhibitor 498 733 IPR032675 -
Cpe02g01749 1104 Gene3D Ribonuclease Inhibitor 286 494 IPR032675 -
Cpe02g01749 1104 Gene3D Ribonuclease Inhibitor 174 278 IPR032675 -
Cpe02g01749 1104 ProSiteProfiles Protein kinase domain profile. 816 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01749 1104 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Cpe02g01749 1104 Gene3D Phosphorylase Kinase; domain 1 781 892 - -
Cpe02g01749 1104 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 205 303 - -
Cpe02g01749 1104 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 6 253 - -
Cpe02g01749 1104 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 297 1099 - -
Cpe02g01749 1104 ProSitePatterns Serine/Threonine protein kinases active-site signature. 938 950 IPR008271 GO:0004672|GO:0006468
Cpe02g01749 1104 SMART serkin_6 816 1093 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01749 1104 SUPERFAMILY Protein kinase-like (PK-like) 798 1092 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01749 Cpe-Chr2:14276185 Cpe06g00839 Cpe-Chr6:5385336 5.98E-177 dispersed
Cpe07g01136 Cpe-Chr7:9964265 Cpe02g01749 Cpe-Chr2:14276185 1.11E-122 dispersed
Cpe13g00500 Cpe-Chr13:5132461 Cpe02g01749 Cpe-Chr2:14276185 2.57E-87 dispersed
Cpe15g00892 Cpe-Chr15:8578801 Cpe02g01749 Cpe-Chr2:14276185 2.75E-14 dispersed
Cpe02g01749 Cpe-Chr2:14276185 Cpe09g01014 Cpe-Chr9:8946550 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62252 PF00069 Pkinase 2.10E-47 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01749 - - csv:101204561 1702.18