Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01751 ATGAGACCGCTTCAGCCGCCGCAGGGTGTAAATCCGGCCACCGATCGTCCTCGTCGCCGCCCGAATCTAACCCTTCCTCTTCCGCAGCGGGACAATACGTCTTTGGCTGTTCCTCTCCCTTTGCCTCCGACGTCTTCTAACGCCGCTCCTCCTCCTTCCACCAGTCAACTCCACAACGGCAACCGTCCACCGGAGCCTCAGCCACAGCCTCAGCCGCAGAAGCATCAGGTTTTCAGCCTCGCCGACTTTGAGCGAGTCAGTCGAATCGGAAGTGGATGCGGAGGCACCGTCTACAAAGTGATTCACCGTCCCACCGGCCGCGTCTATGCTCTGAAGGTCATTTATGGAAACCACGAGGACGCGGTTAGGCTTCAGATGTGCCGTGAGGTTGAGATCCTTCGCGACGTTGACAATCCCTATGTGGTCAAGTGCCACGATATGTTCGATCACAACGGCGAAATCCAGGTTCTCCTTGAATACATGGATCGAGGCTCCCTGGAAGGAACGCACATCCCTCAAGAACATCATCTCTCCGATTTGGCTCGCCAGATTCTCAGCGGCCTCGCTTATCTCCATAGCCGCCGCATCGTACATCGCGACATCAAACCCTCGAATCTCCTAATTAATTCCCGGAGGCAGGTTAAGATCGCCGATTTCGGCGTCGGTCGAATCCTGGAACAGACGATGGATCCTTGCAATTCCTCCGTTGGAACTATTGCGTACATGAGCCCCGAGAGAATCAATTCCGATCTAAATCAGGGCCAGTACAATGGCTACGCAGGGGATATTTGGAGTTTTGGGGTTAGCATATTGGAATTCTACCTCGGACGGTTTCCTCTTGCCGTGGAGAGGCCTGGGGACTGGGCGAGCTTGATGTGTGCTATATGTATGGCTCAGCCACCGGAGGCGCCGCCCACCGCGTCGCCGGAGTTTCGCCATTTTATTGCCTGTTGTTTGCAGAGAGAAGCTCGGAAGAGATGGACTGCAGCTGCACTACTGGAACATGCGTTTATAGCGGGGAAAAATGGAGCGGCGAGTCAGTACCAGAATCAGCAAACTCATCACCAGAATCTTCGTCAACTATTACCTCCGCCGCCCCTTCGTCCTTCCAGCTTTTCTTGA 1122 54.72 MRPLQPPQGVNPATDRPRRRPNLTLPLPQRDNTSLAVPLPLPPTSSNAAPPPSTSQLHNGNRPPEPQPQPQPQKHQVFSLADFERVSRIGSGCGGTVYKVIHRPTGRVYALKVIYGNHEDAVRLQMCREVEILRDVDNPYVVKCHDMFDHNGEIQVLLEYMDRGSLEGTHIPQEHHLSDLARQILSGLAYLHSRRIVHRDIKPSNLLINSRRQVKIADFGVGRILEQTMDPCNSSVGTIAYMSPERINSDLNQGQYNGYAGDIWSFGVSILEFYLGRFPLAVERPGDWASLMCAICMAQPPEAPPTASPEFRHFIACCLQREARKRWTAAALLEHAFIAGKNGAASQYQNQQTHHQNLRQLLPPPPLRPSSFS 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14284672 14285793 + Cp4.1LG02g17530.1 Cpe02g01751 465700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01751 373 MobiDBLite consensus disorder prediction 348 373 - -
Cpe02g01751 373 CDD PKc_MAPKK_plant_like 81 340 - -
Cpe02g01751 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Cpe02g01751 373 Gene3D Transferase(Phosphotransferase) domain 1 165 362 - -
Cpe02g01751 373 Gene3D Phosphorylase Kinase; domain 1 58 162 - -
Cpe02g01751 373 SUPERFAMILY Protein kinase-like (PK-like) 81 357 IPR011009 -
Cpe02g01751 373 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 15 361 - -
Cpe02g01751 373 Pfam Protein kinase domain 83 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01751 373 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Cpe02g01751 373 MobiDBLite consensus disorder prediction 1 76 - -
Cpe02g01751 373 ProSiteProfiles Protein kinase domain profile. 83 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01751 373 SMART serkin_6 83 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01751 373 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 15 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01751 Cpe-Chr2:14284672 Cpe20g00165 Cpe-Chr20:929013 4.47E-96 dispersed
Cpe02g01751 Cpe-Chr2:14284672 Cpe03g01040 Cpe-Chr3:8476797 2.24E-15 wgd
Cpe02g01751 Cpe-Chr2:14284672 Cpe07g01073 Cpe-Chr7:9515287 4.28E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62253 PF00069 Pkinase 2.40E-60 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01751 K13413 - csv:101219669 630.172