Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g01751 | ATGAGACCGCTTCAGCCGCCGCAGGGTGTAAATCCGGCCACCGATCGTCCTCGTCGCCGCCCGAATCTAACCCTTCCTCTTCCGCAGCGGGACAATACGTCTTTGGCTGTTCCTCTCCCTTTGCCTCCGACGTCTTCTAACGCCGCTCCTCCTCCTTCCACCAGTCAACTCCACAACGGCAACCGTCCACCGGAGCCTCAGCCACAGCCTCAGCCGCAGAAGCATCAGGTTTTCAGCCTCGCCGACTTTGAGCGAGTCAGTCGAATCGGAAGTGGATGCGGAGGCACCGTCTACAAAGTGATTCACCGTCCCACCGGCCGCGTCTATGCTCTGAAGGTCATTTATGGAAACCACGAGGACGCGGTTAGGCTTCAGATGTGCCGTGAGGTTGAGATCCTTCGCGACGTTGACAATCCCTATGTGGTCAAGTGCCACGATATGTTCGATCACAACGGCGAAATCCAGGTTCTCCTTGAATACATGGATCGAGGCTCCCTGGAAGGAACGCACATCCCTCAAGAACATCATCTCTCCGATTTGGCTCGCCAGATTCTCAGCGGCCTCGCTTATCTCCATAGCCGCCGCATCGTACATCGCGACATCAAACCCTCGAATCTCCTAATTAATTCCCGGAGGCAGGTTAAGATCGCCGATTTCGGCGTCGGTCGAATCCTGGAACAGACGATGGATCCTTGCAATTCCTCCGTTGGAACTATTGCGTACATGAGCCCCGAGAGAATCAATTCCGATCTAAATCAGGGCCAGTACAATGGCTACGCAGGGGATATTTGGAGTTTTGGGGTTAGCATATTGGAATTCTACCTCGGACGGTTTCCTCTTGCCGTGGAGAGGCCTGGGGACTGGGCGAGCTTGATGTGTGCTATATGTATGGCTCAGCCACCGGAGGCGCCGCCCACCGCGTCGCCGGAGTTTCGCCATTTTATTGCCTGTTGTTTGCAGAGAGAAGCTCGGAAGAGATGGACTGCAGCTGCACTACTGGAACATGCGTTTATAGCGGGGAAAAATGGAGCGGCGAGTCAGTACCAGAATCAGCAAACTCATCACCAGAATCTTCGTCAACTATTACCTCCGCCGCCCCTTCGTCCTTCCAGCTTTTCTTGA | 1122 | 54.72 | MRPLQPPQGVNPATDRPRRRPNLTLPLPQRDNTSLAVPLPLPPTSSNAAPPPSTSQLHNGNRPPEPQPQPQPQKHQVFSLADFERVSRIGSGCGGTVYKVIHRPTGRVYALKVIYGNHEDAVRLQMCREVEILRDVDNPYVVKCHDMFDHNGEIQVLLEYMDRGSLEGTHIPQEHHLSDLARQILSGLAYLHSRRIVHRDIKPSNLLINSRRQVKIADFGVGRILEQTMDPCNSSVGTIAYMSPERINSDLNQGQYNGYAGDIWSFGVSILEFYLGRFPLAVERPGDWASLMCAICMAQPPEAPPTASPEFRHFIACCLQREARKRWTAAALLEHAFIAGKNGAASQYQNQQTHHQNLRQLLPPPPLRPSSFS | 373 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 14284672 | 14285793 | + | Cp4.1LG02g17530.1 | Cpe02g01751 | 465700 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g01751 | 373 | MobiDBLite | consensus disorder prediction | 348 | 373 | - | - | |
Cpe02g01751 | 373 | CDD | PKc_MAPKK_plant_like | 81 | 340 | - | - | |
Cpe02g01751 | 373 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 196 | 208 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe02g01751 | 373 | Gene3D | Transferase(Phosphotransferase) domain 1 | 165 | 362 | - | - | |
Cpe02g01751 | 373 | Gene3D | Phosphorylase Kinase; domain 1 | 58 | 162 | - | - | |
Cpe02g01751 | 373 | SUPERFAMILY | Protein kinase-like (PK-like) | 81 | 357 | IPR011009 | - | |
Cpe02g01751 | 373 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 | 15 | 361 | - | - | |
Cpe02g01751 | 373 | Pfam | Protein kinase domain | 83 | 338 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe02g01751 | 373 | ProSitePatterns | Protein kinases ATP-binding region signature. | 89 | 112 | IPR017441 | GO:0005524 | |
Cpe02g01751 | 373 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Cpe02g01751 | 373 | ProSiteProfiles | Protein kinase domain profile. | 83 | 338 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe02g01751 | 373 | SMART | serkin_6 | 83 | 338 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe02g01751 | 373 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 15 | 361 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g01751 | Cpe-Chr2:14284672 | Cpe20g00165 | Cpe-Chr20:929013 | 4.47E-96 | dispersed | |
Cpe02g01751 | Cpe-Chr2:14284672 | Cpe03g01040 | Cpe-Chr3:8476797 | 2.24E-15 | wgd | |
Cpe02g01751 | Cpe-Chr2:14284672 | Cpe07g01073 | Cpe-Chr7:9515287 | 4.28E-59 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62253 | PF00069 | Pkinase | 2.40E-60 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g01751 | K13413 | - | csv:101219669 | 630.172 |