Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01752 ATGGTCAAAGCTCAGCGGGGAAGACGCAAGAGGACGATATTTCGCAGAAGCTTCCTAGCTGCTGTGGAGCTTGCCGTCTTGCCTTCCCTTCCTAATCGCCACCCACTCTCGTCTTCTTCGTCGCTTGATCTATTTATTATTTTTGTGAACTCGAGGATCTTATTTCGAAGATCTTTCCTTCTGTCTGGCCTTTGCCGACTGTGGTCACCCAACTGGGATTCGACCTGGATATCCTCGTTGCGTCACTTCAAGTTCATCTCCTGTCTGATGGGATCGATAGAGGAGGGAACAAATTACCTATCTGACGAAGATATTCCATTGAAGGGAACACCAGTTGCGAAAAACTTATCGCATAGCTTTGACTGTGAGACGGTTCATGTGCGTTCCTCCCCAGATGATAAAAGATGGTGGAAGACTAACAACATTCGTTTTAGACCTCTTGAAAGTGCTAAAATAGTGTTGATTAAAGCAAAGATCAACGTGTTACTTCCTTTTGGTCCTTTGGCAATCCTGCTACATTATTTAACTGGAAAGCATGGTTTGGTCTTCTTTTTCACTTTACTTGGAATTACACCTTTGGCAGAACGTCTTGGTTATGCAACAGAGCAGCTTGCTTCCTATACTGGTCCAACAGTTGGTGGTCTTTTGAATGCAACATTTGGAAATGCAACCGAAATGATTATATCGATTTATGCATTAAAGAGTGGGATGATTAGGGTTGTTCAACAGTCGTTATTGGGATCAATCTTGTCGAATATGCTCCTAGTGCTTGGTTGCGCTTTCTTCACTGGTGGGATTGTTCATCATAAGAATGTGCAGACTTTCAATAAGGGTACTGCTGTTGTGAATTCAGGATTGTTGTTAATGGCTGTTATGGGAACAACGTTTCCGGCTGTGCTCCATTTCACCCACACAGAACTTCATTCTGGAGAGTCAGCATTGTCTCTTTCAAGGTTTAGCAGTTGTATAATGTTAATTGCATATGCAAGCTTCCTTTTCTTTCAACTAAAAAGTCAGCACAATCTCTATGGTTCTCTTGATGAGGAAGGTGATGGTGAAGTTGAGGAGGATCCTGAGATTTATGCTTGGGAAGCAATTGGGTGGCTTGCTATCTTGACTGTATGGGTATCGATTTTATCTGGATACCTTGTTGATGCTATCGAGGGAGCATCTGAATCATTACATTTGCCAGTGGCTTTTATTAGTGTAATTTTGTTGCCAATAGTTGGAAATGCTGCTGAACATGCAAGTGCAATCATGTTTGCCATGAAGGATAAGCTTAACATCACCCTTGGAGTTGCTATTGGATCATCAACACAAATATCCATGTTTGTGATCCCATTTTGCGTCGTTGTTGGATGGTGTATGGGAATACCAATGGACTTGAACTTTAAACTCTTTGAGACTGCAACTCTGTTTATAACTGTGCTAGTGGTGGCCTTTATGTTGCAGGAGGGGACGTCAAATTATTTCAAAGGTCTAATGCTTATTCTATGCTACCTCATTGTGGCAGCCAGCTTCTTTGTACATATGATGATTAACCCTGGAAGCAAGTTGGTCCTGGAACTTTACTGCAAGCTGAAGTTCTGCATTGCATTAATCCTCAAACCACCACTGCTTCACTTCGTTGGAAGCTGCAAACATCAGATGGAGTTTGGTTTCGCAGAGAGGAGCAATTGGGGAGAGGCGTTGCTGCTCATCAATATCTGCATTTTGGGATGGAGGGCCAGTTTTATCTATGGAGCTACGGATCCAGGAGATGTGTCTGCTCTAAATGCCATGTTTACTAGTTTAAACTCGCCTCCAATTCTAACCCTATGGACTGCAAGTGGTGGAGATCCGTGTGGTCAGCTTTGGAAAGCCGTTACTTGCTCGGGCTCACGGGTCACAGAAATTTCACTGTCTGGTTTAGGACTTTCTGGATCACTGGGATACCAACTCTCAAGTTTGACATCTCTAATTAATCTAGACGTGAGTATCAACAATCTTGGACCTGACATACCTTATCAACTCCCTCAAAACTTGCAAAAACTAAACCTTGGATGTAATAACTTCAGTGGAAGCCTTCCCTATTCTATTTCTCAAATGAGTTTGCTTATATCCTTGAACATCAGCCACAATCAGCTTCGAGATCAAATCAACAATATGTTCTGGAATCTTTCTTCCCTGTCCATGTTGGATGTCTCTTTCAATTTTCTGTCAGGTACTCTCCCCCAGAGTTTTAGCAACCTTACCAGTATGAACTCAATGTTTCTGCAAAACAACCAGTTCAGTGGCACTATAGATGTTCTTGCAAATCTTCCTCTCCAAAACTTGAATGTCGAAAACAACAATTTTACTGGTTGGGTTCCTGAACGATTGAAGAACATATATATTCAGGATGGTGGCAATTCTTGGAGCTATGGGCTTGCACCCCCACCTCCGCCCGGTACATCTCCAGCCTACCACAATTACAGATATCACAAGCCTGGGAACAATTACAGCCCACTGAGTAGTGGTGCTGCTGATGGAGATAGCAGTAGATCAGGAATCAGTGGTGGTGCCATTGCTGGAATTCTTATATCTCTGCTAGTTGTGGGAGCAGTGGTAGCATATCTCTTTGTAAAGAGAAGGCCCAAGAAGTCATCCACAGACATAGAGAAGCTAAAGCTTGGGAACCAGCTTAGCGTATCTACTGCTTCAAATGCAGCGCAAGAAATGAAGCTTATTCATACTTCATCCTCATTTGATACAAAAGCATTGGATTCTCCTGCTTCAATCAATCTAAGACCCCCACCTATGGACAGTCATAAATCGTTTGATGACAATGATACATCAACGATACCTGCTGCGAAGAAGACCAATGTCGCTCCTGAGATAAGTGTGAAGTCATATTCAATAGCAGATCTGCAATTGGCTACAGGCAGTTTCAATGTAGAAAATCTTCTTGGTGAGGGATCATTTGGACGTGTTTTTCGGGCTCAGTTTGACGATGGGAAGGTTCTTGCCGTGAAGAAAATAGATTCAGCTGCCTTCCCTAGAGAGTTTTTGGAAGATTTCACAGAGATAGTTGCTAATGTATCTCAGTTGCATCATCCTAATGTAACAGAGCTAATGGGTTATTGCTCAGAGCATGGTCTGCATTTGCTACTTTATGAGTTCCATAAGAATGGCTCACTCCATGACTTCTTGCATATATCAGATGAATATAGCAAGCCACTGACTTGGAACTCACGTGCATTAGATCAGCAAGCAGGATCTGGATATAGTGCCCCGGAGGTTACCATGTCTGGTCAATATACATTAAAAAGCGACATATACAGCTTTGGAGTGGTGATGTTAGAACTTCTATGTGGACGTAAGCCGTTTGATAGTTCTAGGCCAAGAGCTGAGCAATCCTTGGTTCGATGGGCAACGCCTCAGCTCCATGACATTGATGCCTTGACGAAAATGGTTGATCCTGCACTTAAAGGTCTTTACCCAGTCAAGTCTCTCTCAAGATTTGCAGATGTTGTGGCTCTCTGCGTCCAGCCCGAGCCGGAATTCAGACCTCCTATGTCAGAGGTGGTGGAAGCATTGGTTCGGCTTGTGCAGAGATCCAACATGAGCAGAAGAACATTTGGAAGTGATCACGGATCATCTTTTAGAACTGATGAACCTGATGCACATGAGACATCTTAA 3660 43.06 MVKAQRGRRKRTIFRRSFLAAVELAVLPSLPNRHPLSSSSSLDLFIIFVNSRILFRRSFLLSGLCRLWSPNWDSTWISSLRHFKFISCLMGSIEEGTNYLSDEDIPLKGTPVAKNLSHSFDCETVHVRSSPDDKRWWKTNNIRFRPLESAKIVLIKAKINVLLPFGPLAILLHYLTGKHGLVFFFTLLGITPLAERLGYATEQLASYTGPTVGGLLNATFGNATEMIISIYALKSGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHKNVQTFNKGTAVVNSGLLLMAVMGTTFPAVLHFTHTELHSGESALSLSRFSSCIMLIAYASFLFFQLKSQHNLYGSLDEEGDGEVEEDPEIYAWEAIGWLAILTVWVSILSGYLVDAIEGASESLHLPVAFISVILLPIVGNAAEHASAIMFAMKDKLNITLGVAIGSSTQISMFVIPFCVVVGWCMGIPMDLNFKLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHMMINPGSKLVLELYCKLKFCIALILKPPLLHFVGSCKHQMEFGFAERSNWGEALLLINICILGWRASFIYGATDPGDVSALNAMFTSLNSPPILTLWTASGGDPCGQLWKAVTCSGSRVTEISLSGLGLSGSLGYQLSSLTSLINLDVSINNLGPDIPYQLPQNLQKLNLGCNNFSGSLPYSISQMSLLISLNISHNQLRDQINNMFWNLSSLSMLDVSFNFLSGTLPQSFSNLTSMNSMFLQNNQFSGTIDVLANLPLQNLNVENNNFTGWVPERLKNIYIQDGGNSWSYGLAPPPPPGTSPAYHNYRYHKPGNNYSPLSSGAADGDSSRSGISGGAIAGILISLLVVGAVVAYLFVKRRPKKSSTDIEKLKLGNQLSVSTASNAAQEMKLIHTSSSFDTKALDSPASINLRPPPMDSHKSFDDNDTSTIPAAKKTNVAPEISVKSYSIADLQLATGSFNVENLLGEGSFGRVFRAQFDDGKVLAVKKIDSAAFPREFLEDFTEIVANVSQLHHPNVTELMGYCSEHGLHLLLYEFHKNGSLHDFLHISDEYSKPLTWNSRALDQQAGSGYSAPEVTMSGQYTLKSDIYSFGVVMLELLCGRKPFDSSRPRAEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVEALVRLVQRSNMSRRTFGSDHGSSFRTDEPDAHETS 1219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14286057 14298751 + Cp4.1LG02g17500.1 Cpe02g01752 465701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01752 1219 TIGRFAM caca2: calcium/proton exchanger 149 508 - -
Cpe02g01752 1219 Gene3D Ribonuclease Inhibitor 584 801 IPR032675 -
Cpe02g01752 1219 Gene3D Transferase(Phosphotransferase) domain 1 954 1074 - -
Cpe02g01752 1219 Pfam Sodium/calcium exchanger protein 366 505 IPR004837 GO:0016021|GO:0055085
Cpe02g01752 1219 Pfam Sodium/calcium exchanger protein 181 336 IPR004837 GO:0016021|GO:0055085
Cpe02g01752 1219 Pfam Protein tyrosine and serine/threonine kinase 972 1061 IPR001245 GO:0004672|GO:0006468
Cpe02g01752 1219 Pfam Protein tyrosine and serine/threonine kinase 1081 1186 IPR001245 GO:0004672|GO:0006468
Cpe02g01752 1219 PANTHER OS01G0253100 PROTEIN 1073 1214 IPR045271 GO:0004714|GO:0006468
Cpe02g01752 1219 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 1073 1214 - -
Cpe02g01752 1219 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 576 1072 - -
Cpe02g01752 1219 ProSiteProfiles Protein kinase domain profile. 970 1219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01752 1219 MobiDBLite consensus disorder prediction 1197 1219 - -
Cpe02g01752 1219 Gene3D - 353 509 IPR044880 -
Cpe02g01752 1219 Gene3D - 210 349 IPR044880 -
Cpe02g01752 1219 Pfam Leucine rich repeat N-terminal domain 586 625 IPR013210 -
Cpe02g01752 1219 ProSitePatterns Protein kinases ATP-binding region signature. 976 999 IPR017441 GO:0005524
Cpe02g01752 1219 MobiDBLite consensus disorder prediction 922 941 - -
Cpe02g01752 1219 MobiDBLite consensus disorder prediction 1204 1219 - -
Cpe02g01752 1219 SUPERFAMILY Protein kinase-like (PK-like) 948 1186 IPR011009 -
Cpe02g01752 1219 Pfam Leucine rich repeat 674 731 IPR001611 GO:0005515
Cpe02g01752 1219 Gene3D Transferase(Phosphotransferase) domain 1 1075 1208 - -
Cpe02g01752 1219 PANTHER OS01G0253100 PROTEIN 576 1072 IPR045271 GO:0004714|GO:0006468
Cpe02g01752 1219 SUPERFAMILY L domain-like 583 789 - -
Cpe02g01752 1219 TIGRFAM cax: calcium/proton exchanger 162 508 IPR004798 GO:0006816|GO:0015369
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01752 Cpe12g00545 CCT
Cpe02g01752 Cpe17g00420 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01752 Cpe-Chr2:14286057 Cpe17g00420 Cpe-Chr17:3144363 0 dispersed
Cpe08g00824 Cpe-Chr8:6576092 Cpe02g01752 Cpe-Chr2:14286057 2.61E-36 dispersed
Cpe08g00825 Cpe-Chr8:6579625 Cpe02g01752 Cpe-Chr2:14286057 5.67E-18 dispersed
Cpe10g00953 Cpe-Chr10:5356035 Cpe02g01752 Cpe-Chr2:14286057 5.98E-86 dispersed
Cpe19g00283 Cpe-Chr19:2455207 Cpe02g01752 Cpe-Chr2:14286057 9.26E-94 dispersed
Cpe20g00626 Cpe-Chr20:3917624 Cpe02g01752 Cpe-Chr2:14286057 3.17E-165 dispersed
Cpe03g01039 Cpe-Chr3:8471808 Cpe02g01752 Cpe-Chr2:14286057 0 transposed
Cpe12g00545 Cpe-Chr12:5586848 Cpe02g01752 Cpe-Chr2:14286057 0 wgd
Cpe02g01752 Cpe-Chr2:14286057 Cpe03g01037 Cpe-Chr3:8458185 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62254 PF01699 Na_Ca_ex 1.20E-19 No_clan Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01752 - - mcha:111020292 1032.32