Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g01768 ATGCGTACGGGCGTGCGCGTGGCGGGGCTTATGCGTGCACCCGCCCCAACCATCAGCGCCGCTTTCCTCTTCCTCCCCTTATGCATAATGGTCGTCTTGTCGGCTTCCGATGCCGAAACTCTCCTTCAATTCAAGCGCTCTTTGACCTCCACCACCTCTCTTCGCAGCTGGGACCCCTCTGTTCCTCCTTGCGACAACCGCAAGGCTAACTGGGCGGGTGTGCTTTGTATGAATGGCTATATTAAGGGTCTGCGGCTCGAGAATATGGGGCTTAAGGGCGAGGTTGATGTGAATCCCCTCGTTTCTTTGACTCATTTGCGCACCCTCAGCTTCATGAACAACACCTTGGTTGGGCCTTGGCCTAGTGTTATAAGCAAACTAGGCAATCTACGATCTGTTTATCTCTCCTATAACCATTTTTCTGGAGAAATCCCAGACGATGCCTTTACTAGTATGAAATTTTTGAAGAAAGTGTTTTTGACCAATAATGAATTCAAGGGGCAAATTCCCTTATCTCTCGCTTCCGTGTCTACGCTTATGGAGTTGAGACTTGATGGAAACAAATTCAGAGGCCAAGTCCCCCACCTTGAAATGGATACTTTGAAGAAACTTAATGTTTCCAACAATGAGTTGAGGGGCCCCATACCTAGAAGCTTAAGCCATATGGATCCTACCTGTTTTTCAGGTAACAGTGATTTGTGTGGAGATCCTCTTCCAGCATGCGAGATATCCCAGTTGTCACCCTCAGGGCTGCTGAAAATTGCGGTGATACTGATAGTTTTGGGGGTGACATTAGCAGTGACAGCTGCAATTTTCATCATTTTGGTTTTAAGGAAGCATCCAGCAGGAGGCAGTATTGAAGAGGAGAACAAGCCAGCGGAGAGTGCATACAGATCCACACAGTCGTCGTCGGTGGCACCGGCTCCGAAGAGGGGGGCAGAGCATGGCAAACTGTTGTTCGTGAGGAATGACCGGGAGAGGTTCGACTTACAGGATCTGCTCCGAGCGTCCGCCGAAGTATTAGGGAGTGGCTCATTTGGGTCTTCCTACAAAGCAACTGTTCTCTGTGGTGCGGTGGTGGTGAAGCGATACAAGCACATGAACAACGCGGGAAGAGAGGAGTTTCATGAGTACATGAGAAGGCTAGGCAGGTTGACGCATCCAAATCTACTGCCCCTGGTTGCCTATTATTACAGGAAGGAAGAGAAGCTCTTGGTTTTCGACTTTGTAGACAACGGCAGTTTGGCAAGCCATCTGCACGGGAACCACAACTTGGAGGAGCCAGGCCTGGATTGGGGCGCCAGGTTGAAGATCATCAAAGGGATAGCAAGAGGGTTGTGTTACCTCTACACCTCCCTGCCCAACATAGCAGCACCCCATGGCCATCTCAAATCTTCAAACGTGCTGCTAGACGAGTCGTTTGAACCTCTGCTCACGGATTACGGCCTAATCCCGGTAGCCAACCTTGAGCACAGCCAAACACTGATGATGGCCTACAAATCTCCGGAGTATGCGCAGTTGGGGCGCATAACCAAGAAGAGCGACGTGTGGAGCTTAGGAATTGTGATACTGGAGATGTTGACAGGTAGGTTCCCAGAGAACTACCTCACCAGAAATCATGACATCAAAGCAGACCTGGCCAGTTGGGTGAACAACATGATAAAGGAAAAGAAGACTGCACAAGTGTTCGATGCAGAGCTGGGGAGAGCCAGGGAGAGCAACAAAGGCGAACTGTTGAAGATGCTGAAGATTGGGTTGAGTTGCTGTGAGGACGATGTGGATAGAAGGTCGGACTTGAATGAGATAGTAAAACAAATTGAAGAGCTGAAGGAGGGAGAGTTGAGTGATGATGGAGTTGACTTCTCCCCACACTAA 1875 49.71 MRTGVRVAGLMRAPAPTISAAFLFLPLCIMVVLSASDAETLLQFKRSLTSTTSLRSWDPSVPPCDNRKANWAGVLCMNGYIKGLRLENMGLKGEVDVNPLVSLTHLRTLSFMNNTLVGPWPSVISKLGNLRSVYLSYNHFSGEIPDDAFTSMKFLKKVFLTNNEFKGQIPLSLASVSTLMELRLDGNKFRGQVPHLEMDTLKKLNVSNNELRGPIPRSLSHMDPTCFSGNSDLCGDPLPACEISQLSPSGLLKIAVILIVLGVTLAVTAAIFIILVLRKHPAGGSIEEENKPAESAYRSTQSSSVAPAPKRGAEHGKLLFVRNDRERFDLQDLLRASAEVLGSGSFGSSYKATVLCGAVVVKRYKHMNNAGREEFHEYMRRLGRLTHPNLLPLVAYYYRKEEKLLVFDFVDNGSLASHLHGNHNLEEPGLDWGARLKIIKGIARGLCYLYTSLPNIAAPHGHLKSSNVLLDESFEPLLTDYGLIPVANLEHSQTLMMAYKSPEYAQLGRITKKSDVWSLGIVILEMLTGRFPENYLTRNHDIKADLASWVNNMIKEKKTAQVFDAELGRARESNKGELLKMLKIGLSCCEDDVDRRSDLNEIVKQIEELKEGELSDDGVDFSPH 624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14373468 14375508 + Cp4.1LG02g17410.1 Cpe02g01768 465717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g01768 624 Pfam Leucine rich repeat N-terminal domain 35 76 IPR013210 -
Cpe02g01768 624 Pfam Protein tyrosine and serine/threonine kinase 339 606 IPR001245 GO:0004672|GO:0006468
Cpe02g01768 624 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 20 616 - -
Cpe02g01768 624 SUPERFAMILY L domain-like 35 222 - -
Cpe02g01768 624 Pfam Leucine Rich Repeat 201 221 IPR001611 GO:0005515
Cpe02g01768 624 SUPERFAMILY Protein kinase-like (PK-like) 339 609 IPR011009 -
Cpe02g01768 624 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 616 - -
Cpe02g01768 624 Gene3D Ribonuclease Inhibitor 36 151 IPR032675 -
Cpe02g01768 624 ProSiteProfiles Protein kinase domain profile. 335 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g01768 624 Gene3D Transferase(Phosphotransferase) domain 1 410 619 - -
Cpe02g01768 624 MobiDBLite consensus disorder prediction 285 310 - -
Cpe02g01768 624 Gene3D Ribonuclease Inhibitor 152 242 IPR032675 -
Cpe02g01768 624 Gene3D Phosphorylase Kinase; domain 1 302 409 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01768 Cpe12g00570 CCT
Cpe02g01768 Cpe17g00445 CCT
Cpe02g01768 Cpe12g00570 ECH
Cpe02g01768 Cpe17g00445 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01768 Cpe-Chr2:14373468 Cpe11g00540 Cpe-Chr11:3204724 1.68E-148 dispersed
Cpe07g00238 Cpe-Chr7:1552123 Cpe02g01768 Cpe-Chr2:14373468 5.14E-19 dispersed
Cpe07g00239 Cpe-Chr7:1553786 Cpe02g01768 Cpe-Chr2:14373468 3.90E-12 dispersed
Cpe04g01354 Cpe-Chr4:11044069 Cpe02g01768 Cpe-Chr2:14373468 0 transposed
Cpe18g00665 Cpe-Chr18:6710715 Cpe02g01768 Cpe-Chr2:14373468 0 transposed
Cpe11g01200 Cpe-Chr11:9792792 Cpe02g01768 Cpe-Chr2:14373468 2.84E-146 wgd
Cpe02g01768 Cpe-Chr2:14373468 Cpe03g00994 Cpe-Chr3:8138764 0 wgd
Cpe02g01768 Cpe-Chr2:14373468 Cpe07g01079 Cpe-Chr7:9550744 1.50E-153 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62255 PF07714 PK_Tyr_Ser-Thr 1.80E-28 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g01768 - - cmo:103487533 972.23