Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00001 ATGTCACCTGTGCAAACGCTGCTACTTTTGGCTTTCTTCTGCGCTGGAATCCACACAACCAGTTCTTTAACTGATCCCACAGATCTTGCGGCTCTGGAAGCCCTGAGAAGCGATTGGGAAAATACACCGCCAAGCTGGGGAGCATCAAATGATCCGTGTGGAACTCCCTGGGAAGGAGTGAGTTGCACCAATTCAAGAGTAACTGCACTGAGATTATCAACTATGGGCCTAAAAGGTAAACTTGGTGGTGACATTGGAATGCTGACTGGACTAAAATCATTGGACCTTTCGTTCAATGTAAATCTTACTGGTACAATCTCTCCAAGATTAGGGGATCTGCAGAATTTGAGTATCTTGATCCTGGCTGGGTGTGGGTTCAGTGGCAATATTCCTGAAGCACTGGGCAATCTTTCGGAGCTTTCCTTCTTGGCTTTAAATTCTAACAAATTCACTGGTACCATACCGCCGTCTCTGGGAAAACTCTCCAAACTCTATTGGCTGGACCTGGCAGAGAATCAATTGACAGGTAGCATCCCAGTCTCGACTTCCACATCTCCTGGTTTGGACCTCCTTCTGAATGCTAAACACTTTCATTTCAACAAAAACCAGTTATCAGGTTCCATTTCACCTCAACTTTTTAGCTCTGAAATGGTATTAATACACATATTATTTGATGGAAATCAATTTTCTGGGAGAATACCACAAACATTGGGACTTGTTCAGACCCTTGAGGTTCTGCGACTCGATCGGAATTCTCTAACAGGACCAGTCCCATCAAATCTGAACAACCTAACAAATATCAATGAATTGAATTTAGCCGGCAATAAGTTGACGGGTCCACTGCCAAACCTAACTCAAATGAGCTCACTAAATTACGTGGACCTTAGTAACAACTCATTTGATTCATCGCCAGCTCCAGAATGGTTCTCAAATCTACAATTTCTCACCACTCTGATCGTGGAGTATGGGTCAATACGAGGATCTGTGCCACAAGGAGTGTTTAGTTTACCACAGATACAACAAATAAAACTGAAGAACAATGAATTCAATGACACATTAGATATGGGTGACAAAGTGAGCGAACAGTTGCAGCTCGTTGATTTGCAAAATAACAATATTTCCCATCTTACCCTCGGTTCAAGATATACCAAAACTTTGATGCTGATAGGGAATCCTGTGTGTAGCACTGATGCTACCCTTCCAAACACGAACTACTGCCAGCTTCAAAACCAACCGGTGACATCCTATTCTACCAGCCTTGCCAGCTGTGGAAGTAAGTCATGTTCTTCTGATCAGAAGCTAAGCCCTCAGAGTTGTGAATGTGCCTATCCATTTGAAGGGACTTTATACTTTAGAGCACCCTCGTTCAGGGCATTGTCCAATGTGACTTTGTTTCATTCATTGGAAATGAGCCTTTGGAAAAAACTGGACCTTACGCCTGGTTCAGTTTTTATTCAAAACCCTTTTTTCAATGTTGACGATTATCTTCAGCTGCAGCTTGCACTTTTTCCACCTGAGGAAAAGTATTTTAGTAGGTCAGATATTCAGAGGATTGGGTTTGACCTGAGTAATCAAACCTACAAGCCTCCCAAAGAATTTGGGCCATTTTATTTCATTGCATCTCCCTACGATTTTGAAGTCACGGGTAGGGAAACTTCAGTCAGCCCGGGAGTGATAATTGGGGTAGCTATTGGTTGTACCTTTCTCGTTCTAGGTCTGATTGGGGTTGGAATATATGCAATTTGGCAAAAGAAACGTGCAGAAAGGGCCATTGGATTGAGTCGGCCATTTGAGATATTAAGCACTAATCCTATATCTACCCCAGCTTCTTGGGCACCAAGTGGAAACGATAGTGGAGGTGCACCACAGCTGAAGGGAGCCAGATGGTTTTCTTATGATGAACTTAAAAAATGCACAAATAATTTCTCCATGAGCAATGAGATAGGATCTGGAGGATATGGCAAGGTATACAGAGGAATGCTTGTGGATGGACAAGTAGTTGCGGTCAAAAGAGCTCAGCAAGGGTCAATGCAAGGTGGCCTTGAGTTCAAGACGGAAATCGAACTGCTTTCACGAGTTCATCACAAGAACCTTCTTGGCCTCGTGGGATTTTGTTTTGAACAAGGAGAACAGATGCTTGTTTATGAATTTATGCCTAATGGAACACTGAGAGATAGCCTATGTGGTAAGTTTCCTTGTATGTCTTTAGGTGTTGAACTCATAATTGGTTACTTGGATCCTGAATATTACATGACTCAACAATTAACTGAGAAAAGTGATGTATATAGCTTTGGAGTGGTTATGTTGGAATTGTTAACTGCTAAGCTGCCCATCGAGAAAGGAAAGTACGTAGTTCGTGAGGTGCGTATGTTAATGAATAAAAATGAAGAAGAACATTATGGTCTGAAGCCGATAATGGATGCAACCATGATAAACAGTGCAACCACTATTATTGGGCTTGGAAGGTTCTTGGAGTTGGCCATGCAATGCGTTGATGAATCAGCTACAGAGCGTCCCACAATGTGCGAAGTGGTGAAGGCAATTGAAAGTATTTTGCAGAACGATGGAATTAATACCAACACAACATCTGCATCTTCATCTGCAACCGACTTTGGGGCTTCCAGAACCGCTCCTAGGCATCCCTACAATGATCCTATACCAAAAAAGGACGCTAATGACAGCAGTGCTTTTGATTACAGCGGTGGATACACTCTTTCTACTAAAGTGGAACCCAAATAG 2739 42.61 MSPVQTLLLLAFFCAGIHTTSSLTDPTDLAALEALRSDWENTPPSWGASNDPCGTPWEGVSCTNSRVTALRLSTMGLKGKLGGDIGMLTGLKSLDLSFNVNLTGTISPRLGDLQNLSILILAGCGFSGNIPEALGNLSELSFLALNSNKFTGTIPPSLGKLSKLYWLDLAENQLTGSIPVSTSTSPGLDLLLNAKHFHFNKNQLSGSISPQLFSSEMVLIHILFDGNQFSGRIPQTLGLVQTLEVLRLDRNSLTGPVPSNLNNLTNINELNLAGNKLTGPLPNLTQMSSLNYVDLSNNSFDSSPAPEWFSNLQFLTTLIVEYGSIRGSVPQGVFSLPQIQQIKLKNNEFNDTLDMGDKVSEQLQLVDLQNNNISHLTLGSRYTKTLMLIGNPVCSTDATLPNTNYCQLQNQPVTSYSTSLASCGSKSCSSDQKLSPQSCECAYPFEGTLYFRAPSFRALSNVTLFHSLEMSLWKKLDLTPGSVFIQNPFFNVDDYLQLQLALFPPEEKYFSRSDIQRIGFDLSNQTYKPPKEFGPFYFIASPYDFEVTGRETSVSPGVIIGVAIGCTFLVLGLIGVGIYAIWQKKRAERAIGLSRPFEILSTNPISTPASWAPSGNDSGGAPQLKGARWFSYDELKKCTNNFSMSNEIGSGGYGKVYRGMLVDGQVVAVKRAQQGSMQGGLEFKTEIELLSRVHHKNLLGLVGFCFEQGEQMLVYEFMPNGTLRDSLCGKFPCMSLGVELIIGYLDPEYYMTQQLTEKSDVYSFGVVMLELLTAKLPIEKGKYVVREVRMLMNKNEEEHYGLKPIMDATMINSATTIIGLGRFLELAMQCVDESATERPTMCEVVKAIESILQNDGINTNTTSASSSATDFGASRTAPRHPYNDPIPKKDANDSSAFDYSGGYTLSTKVEPK 912
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 21 6311 - Cp4.1LG03g03340.1 Cpe03g00001 465718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00001 912 Gene3D Transferase(Phosphotransferase) domain 1 719 875 - -
Cpe03g00001 912 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 741 884 - -
Cpe03g00001 912 Gene3D Ribonuclease Inhibitor 184 283 IPR032675 -
Cpe03g00001 912 SUPERFAMILY Protein kinase-like (PK-like) 627 861 IPR011009 -
Cpe03g00001 912 Pfam Protein tyrosine and serine/threonine kinase 740 847 IPR001245 GO:0004672|GO:0006468
Cpe03g00001 912 Pfam Protein tyrosine and serine/threonine kinase 644 727 IPR001245 GO:0004672|GO:0006468
Cpe03g00001 912 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Cpe03g00001 912 Gene3D Ribonuclease Inhibitor 284 428 IPR032675 -
Cpe03g00001 912 ProSitePatterns Protein kinases ATP-binding region signature. 648 670 IPR017441 GO:0005524
Cpe03g00001 912 Gene3D Phosphorylase Kinase; domain 1 616 717 - -
Cpe03g00001 912 PANTHER LRR RECEPTOR-LIKE KINASE 741 884 - -
Cpe03g00001 912 PANTHER LRR RECEPTOR-LIKE KINASE 1 731 - -
Cpe03g00001 912 MobiDBLite consensus disorder prediction 857 912 - -
Cpe03g00001 912 ProSiteProfiles Protein kinase domain profile. 642 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00001 912 SUPERFAMILY L domain-like 52 404 - -
Cpe03g00001 912 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 731 - -
Cpe03g00001 912 MobiDBLite consensus disorder prediction 857 873 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00001 Cpe-Chr3:21 Cpe02g00656 Cpe-Chr2:4105404 1.19E-08 dispersed
Cpe03g00927 Cpe-Chr3:6325143 Cpe03g00001 Cpe-Chr3:21 0 transposed
Cpe16g00119 Cpe-Chr16:2583288 Cpe03g00001 Cpe-Chr3:21 3.21E-119 transposed
Cpe10g01013 Cpe-Chr10:5826319 Cpe03g00001 Cpe-Chr3:21 2.13E-103 wgd
Cpe03g00001 Cpe-Chr3:21 Cpe08g01270 Cpe-Chr8:9167132 1.12E-14 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62256 PF07714 PK_Tyr_Ser-Thr 3.60E-07 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00001 - - csv:101220026 1405.19