Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00016 ATGAATTGTAACGAGGAGAATAGAGGGGAAACCAGTTTTGAGGCGCCAGTTTTGAGGAACTCTGTTGAGGCAGAAGGGAAACCAGTCATCCAGAATGGATCCATAACAGACCAACACTTGACCATCGATGATAATCTTCTCGTTGATCCAAAATTACTATTTATTGGATCCAAGATTGGCGAGGGTGCTCATGGGAAGGTTTATGAAGGCAGGTACCGGAACCAAATTGTGGCCATTAAAGTTCTTCATCGAGGGAGTACTGTAGAAGAAAGGGCCGCACTTGAAAATCGTTTTGCCCGTGAAGTAAATATGATGTCCCGAGTAAAACATGAAAATCTTGTCAAGTTTATTGGAGCTTGTAAAGAACCTCTAATGGTGATAGTTACAGAGCTATTACCAGGAATGTCACTCAGGAAGTATCTGATGAATAATCGTAAGCAACAGCTGGACCCTCGGCTGGCCATTAACTTTGCTTTGGATATTGCTCGTGCTATGGATTGTCTACATGCAAATGGGATTATACATAGAGATCTCAAACCTGATAATTTGTTGCTTACTGCAAACCAAAGGTCTGTGAAGCTTGCAGACTTTGGACTTGCTAGAGAAGAATCTGTGACCGAGATGATGACTGCAGAAACAGGGACTTACCGCTGGATGGCTCCTGAGCTATATAGCACTGTGACATTGCGGCAGGGAGAGAAGAAGCATTACAACAACAAGGTGGACGTTTACAGCTTTGGAATTGTGTTATGGGAACTGTTGACCAACCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCATATGCTGCTGCTTTCAAGCAAGAGAGACCGAGTATTCCAGGCGACATACCTCCAGATCTAGCATTTATCGTACAGTCGTGTTGGGTGGAAGATTCTAAGATGAGGCCCAGCTTCAGCCAGATCATCCGCATGCTTAATGCATATCTATTTACACTCCCACCTCCTTCGTCGCCGTCTTCACCGTCTTCACCAAAATCTGACACAACGGAGACACCAACGTCTAGCAATGGTACTATCACCGAGTTCTCGGCTCGCGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCAGCTAAGAGGGCTAAGAACTCGCAATAA 1128 44.86 MNCNEENRGETSFEAPVLRNSVEAEGKPVIQNGSITDQHLTIDDNLLVDPKLLFIGSKIGEGAHGKVYEGRYRNQIVAIKVLHRGSTVEERAALENRFAREVNMMSRVKHENLVKFIGACKEPLMVIVTELLPGMSLRKYLMNNRKQQLDPRLAINFALDIARAMDCLHANGIIHRDLKPDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFIVQSCWVEDSKMRPSFSQIIRMLNAYLFTLPPPSSPSSPSSPKSDTTETPTSSNGTITEFSARARGKFGFLRQLFAAKRAKNSQ 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 73557 77143 - Cp4.1LG03g03310.1 Cpe03g00016 465733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00016 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Cpe03g00016 375 SUPERFAMILY Protein kinase-like (PK-like) 51 345 IPR011009 -
Cpe03g00016 375 Gene3D Transferase(Phosphotransferase) domain 1 136 337 - -
Cpe03g00016 375 ProSiteProfiles Protein kinase domain profile. 53 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00016 375 MobiDBLite consensus disorder prediction 324 351 - -
Cpe03g00016 375 PRINTS Tyrosine kinase catalytic domain signature 129 142 IPR001245 GO:0004672|GO:0006468
Cpe03g00016 375 PRINTS Tyrosine kinase catalytic domain signature 167 185 IPR001245 GO:0004672|GO:0006468
Cpe03g00016 375 PRINTS Tyrosine kinase catalytic domain signature 241 263 IPR001245 GO:0004672|GO:0006468
Cpe03g00016 375 PRINTS Tyrosine kinase catalytic domain signature 285 307 IPR001245 GO:0004672|GO:0006468
Cpe03g00016 375 PANTHER SERINE-THREONINE PROTEIN KINASE 16 351 - -
Cpe03g00016 375 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 16 351 - -
Cpe03g00016 375 Gene3D Phosphorylase Kinase; domain 1 41 132 - -
Cpe03g00016 375 CDD STKc_MAP3K-like 59 314 - -
Cpe03g00016 375 SMART serkin_6 53 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00016 375 Pfam Protein tyrosine and serine/threonine kinase 55 314 IPR001245 GO:0004672|GO:0006468
Cpe03g00016 375 MobiDBLite consensus disorder prediction 331 351 - -
Cpe03g00016 375 ProSitePatterns Protein kinases ATP-binding region signature. 59 80 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00016 Cpe08g01255 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00016 Cpe-Chr3:73557 Cpe10g00595 Cpe-Chr10:3488252 3.15E-96 dispersed
Cpe04g00132 Cpe-Chr4:1179846 Cpe03g00016 Cpe-Chr3:73557 7.81E-06 transposed
Cpe03g00016 Cpe-Chr3:73557 Cpe08g01255 Cpe-Chr8:9088537 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62260 PF07714 PK_Tyr_Ser-Thr 5.80E-61 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00016 - - cmax:111481423 702.205