Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00034 ATGGGAAAAACCCACAACCCTCTGAGTGAGTTTCAGGTAAACCCACTTCAGTTCATGCAGATTCCTGTAGCAAAAACAGCTGTTTGGGGCTCTAAATCACCTAATAAGAGCAGAAAGTGGAAGTGCCAACAATGGAGAAGCTGTTCTTCATACCTGATTGCTCTCTTTTTTGCTCATCTTTTGGCCTTTTCCCTTCAACCGGTCACTGGCCAGATGTGGGACGGAGTGGCTGTTACACAAGGAGATTTTCAAGCTCTTCAAGCTATAAAACGCGAACTCATCGACCTAAAAGGAGCTTTGCGTAGCTGGAATGGAAGTACTGGAGCTTGTTCCGGGCAGTGGGCAGGAATCAAGTGTGTGAAGGGGCAGGTCATTGCTATACAGCTTCCATGGAAGGCTCTTGCCGGCCGGATTTCCGACAGGATTGGGCAGCTCCGGGAACTTAGAAAGCTCAGCCTCCACGACAATGTGATCTCCGGCACAGTCCCTCGGTCGCTCGGCTTCCTTCCAAATCTCAGAGGAATTTATCTTTTCAACAACAGATTCTCAGGTTCTATTCCTCCTACAATTGGTAATCTTCCCCTTCTTCAAACTCTTGATTTGAGCAACAATTTGCTCACAGGAGAAATTCCTTCTGGTCTAGCAAATTCTACCAAATTGATTAGAGTTAATCTGAGTTACAATTCATTGTCGGGATCTATCCCAAGTAGCTTTACGCAGTCGTTTTCTCTTACAATTCTCGCCCTTCAGCACAACAATATTTCTGGGACCGTCCCAGATTCTTGGGGTGGTCGAACTTGCCCACTTGCTGTTATAACGCTTGATCATAATGCAATATCTGGGGCAATTCCAGCCTCCTTGAGTAAACTGGAATGGCTTCAAGAGATTTCCATCAGTGAAAATAAGATCTCTGGGGCTATACCAGGTGGAATAGGCAAGCTGAAGAGACTTCGCCTTTTGGATCTGTCGAACAACGCCATTAATGGTGGCTTCCCTTCAATTTTCTCTAATCTATCCTCTCTTCAATTATTAAATGTTGAAAATAATCGCCTGGAAAGCCAGATTCCAGGAGATATTGATAGATTGCAGAATCTCTCAGTGGTCAAGCTTGGGAAGAATCGATTAAGTGGTGAGATTCCTGCAAGTTTGGGGAACATTTCTGCTATTACCCAACTTGATTTCTCTGAAAATAACTTCACGGGACAGATACCAACATCGCTGATTAGTTTGTTGAATCTGACCTCTTTCAATGTCTCTTACAACAATCTCTCTGGCCCTGTCCCGGTTCTTCTATCAAATAAGTTCAATGCGAGCTCTTTTGTAGGGAACCTTCAACTGTGTGGTTTTAGTGCTTCAACTCCATGTCAACCTGCATCCTCCCCGCAGAATATTACAACTCCATCATCTGAGGTCCGGAAACCACATCGCCGCAAACTCAGTGTGAAGGACATAATTCTGATAGCCGCTGGAGCTCTGTTGGTGCTTCTTCTTCTTCTCTGCTCAATTTTGCTGTGTTGTTTGTTATCAAAAAGAGCTGCTGCTAGAAAGAATGACAAAACGGCTGGCAAGCAAGCGACAGCGAGAAGCGTCGAGAAGGAAGCACCAGGCAGCACCGAAGTGGGGACGGGTGAAGCCGGAGGAAAACTAGTTCATTTTGATGGGCCATTTGTTTTCACTGCTGATGATCTTCTGTGTGCGACTGCGGAGATCATGGGCAAGAGCACATATGGAACAGCATATAAAGCAACATTAGAAGATGGTAATGAAGTTGCAGTGAAAAGATTGAGGGAAAAAACAACAAAAGGGCAGAAGGAATTTGAAACTGAAGTTGTGGCACTCGGAAAAATTAGACACCCAAATCTACTTGCTCTTAGAGCTTACTACATAGGCCCCAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGCCTAGAGGAAGTCTCTCTTCCTTCCTTCATGCTCGCGGGCCGGAAACCACGGTCGATTGGCCAATGAGGATGAAAATAGCGATCGGAATCACGCAAGGCTTGAACTACCTCCACACAGAGGAGAATCTAATTCATGGGTACCTCACGTCCAGCAACATTCTGCTGGATGATCAGACCAATGCTCGCATTGCAGATTTTGGGCTTCCTAAGCTCATGACTTCAGCTGCAGCCACAAATGTGATTGCCACTGCAGGAACACAGGGCTACAATGCACCAGAGCTAACAAAAACCAAAAAAACCACAACGAAGACAGATGTCTACAGCCTTGGAGTCATAATATTGGAACTTTTGACAGGAAAATCTCCTGGAGAAGCCATGGATGGAATGGATTTACCTCAGTGGGTGGCCTCAATAGTAAAGGAGGAGTGGACAAATGAAGTGTTTGATCTGGAGCTTATGAAAGACGCACCAAATATTGGTGATGAACTGCTGAACACCTTAAAACTAGCCCTGCATTGTGTCGATCCATCACCAGCTGCTCGGCCTGACATTCAGCAAATTCTCCAGCAACTGGAGGAAATTAAGACTTCTACTTCTGGTGAGGATAGCGCCAAAACTCAACCAGCAACTGAATAG 2562 45.28 MGKTHNPLSEFQVNPLQFMQIPVAKTAVWGSKSPNKSRKWKCQQWRSCSSYLIALFFAHLLAFSLQPVTGQMWDGVAVTQGDFQALQAIKRELIDLKGALRSWNGSTGACSGQWAGIKCVKGQVIAIQLPWKALAGRISDRIGQLRELRKLSLHDNVISGTVPRSLGFLPNLRGIYLFNNRFSGSIPPTIGNLPLLQTLDLSNNLLTGEIPSGLANSTKLIRVNLSYNSLSGSIPSSFTQSFSLTILALQHNNISGTVPDSWGGRTCPLAVITLDHNAISGAIPASLSKLEWLQEISISENKISGAIPGGIGKLKRLRLLDLSNNAINGGFPSIFSNLSSLQLLNVENNRLESQIPGDIDRLQNLSVVKLGKNRLSGEIPASLGNISAITQLDFSENNFTGQIPTSLISLLNLTSFNVSYNNLSGPVPVLLSNKFNASSFVGNLQLCGFSASTPCQPASSPQNITTPSSEVRKPHRRKLSVKDIILIAAGALLVLLLLLCSILLCCLLSKRAAARKNDKTAGKQATARSVEKEAPGSTEVGTGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSTYGTAYKATLEDGNEVAVKRLREKTTKGQKEFETEVVALGKIRHPNLLALRAYYIGPKGEKLLVFDYMPRGSLSSFLHARGPETTVDWPMRMKIAIGITQGLNYLHTEENLIHGYLTSSNILLDDQTNARIADFGLPKLMTSAAATNVIATAGTQGYNAPELTKTKKTTTKTDVYSLGVIILELLTGKSPGEAMDGMDLPQWVASIVKEEWTNEVFDLELMKDAPNIGDELLNTLKLALHCVDPSPAARPDIQQILQQLEEIKTSTSGEDSAKTQPATE 853
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 178075 181600 + Cp4.1LG03g03410.1 Cpe03g00034 465751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00034 853 SMART LRR_typ_2 145 169 IPR003591 -
Cpe03g00034 853 SMART LRR_typ_2 314 337 IPR003591 -
Cpe03g00034 853 SMART LRR_typ_2 193 217 IPR003591 -
Cpe03g00034 853 SMART LRR_typ_2 410 433 IPR003591 -
Cpe03g00034 853 SMART LRR_typ_2 338 362 IPR003591 -
Cpe03g00034 853 ProSiteProfiles Protein kinase domain profile. 565 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00034 853 SUPERFAMILY L domain-like 100 447 - -
Cpe03g00034 853 MobiDBLite consensus disorder prediction 832 853 - -
Cpe03g00034 853 Pfam Protein tyrosine and serine/threonine kinase 569 833 IPR001245 GO:0004672|GO:0006468
Cpe03g00034 853 Gene3D Transferase(Phosphotransferase) domain 1 643 851 - -
Cpe03g00034 853 Gene3D Ribonuclease Inhibitor 231 330 IPR032675 -
Cpe03g00034 853 Pfam Leucine rich repeat N-terminal domain 81 119 IPR013210 -
Cpe03g00034 853 Gene3D Ribonuclease Inhibitor 331 457 IPR032675 -
Cpe03g00034 853 Pfam Leucine Rich Repeat 196 214 IPR001611 GO:0005515
Cpe03g00034 853 Gene3D Phosphorylase Kinase; domain 1 571 642 - -
Cpe03g00034 853 PRINTS Leucine-rich repeat signature 196 209 - -
Cpe03g00034 853 PRINTS Leucine-rich repeat signature 314 327 - -
Cpe03g00034 853 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 41 841 - -
Cpe03g00034 853 Gene3D Ribonuclease Inhibitor 79 230 IPR032675 -
Cpe03g00034 853 Pfam Leucine rich repeat 269 327 IPR001611 GO:0005515
Cpe03g00034 853 SUPERFAMILY Protein kinase-like (PK-like) 569 837 IPR011009 -
Cpe03g00034 853 MobiDBLite consensus disorder prediction 518 542 - -
Cpe03g00034 853 CDD STKc_IRAK 571 836 - -
Cpe03g00034 853 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 41 841 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00034 Cpe10g00975 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00034 Cpe-Chr3:178075 Cpe04g01150 Cpe-Chr4:9863766 8.90E-22 dispersed
Cpe05g00740 Cpe-Chr5:4535420 Cpe03g00034 Cpe-Chr3:178075 9.29E-38 dispersed
Cpe08g01239 Cpe-Chr8:8981149 Cpe03g00034 Cpe-Chr3:178075 4.01E-42 transposed
Cpe01g00100 Cpe-Chr1:585262 Cpe03g00034 Cpe-Chr3:178075 1.79E-47 wgd
Cpe01g01012 Cpe-Chr1:5980111 Cpe03g00034 Cpe-Chr3:178075 1.72E-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62261 PF07714 PK_Tyr_Ser-Thr 1.50E-41 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00034 - - bhj:120090401 1446.03