Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g00074 | ATGCTTCAGATCCGGCTTAGCAAAGTTCCACAGGCTGAAGGTGGTGCTGGGGCAGTGAAGCCCTCGCCGGCGGAGTCTGTGACGGTCGCATGCCCTGACCACCTCGTTCTTGCTGATCTCCCTGTAGCAAAAGGCATTGGTGCGGCTACCGCTGCTTCCATTGTCAAGTCTGTGGGTCGCAGGTCTCGCCGTCAGCTTGGAGAACGAGTTCATTTTTGTGTCAGATGCGACTTTCCTATTGCAATTTATGGTCGCCTGAGTCCCTGTGAGCATGCCTTCTGTCTTGATTGTGCAAGAAGCGATTCTTTGTGCTACCTTTGTGATGACCGCATCCAGAAGATTCAAACTATAAAAATGATGGAGGGGATCTTCATTTGTGCAGCCCCACACTGTCTCAAGTCTTTTCTAAAGAGGACTGATTTCGAATCTCATATACACGAGAGCCATGCTGACCTTCTTAAGCCAAATGCAGAGAAGGAAGATGGAAATGAAATTGAGGCCCATAGTGCTAAACAATCTACAGCTTCTGAGACGTCAGTCCGAGGTCCATTGAGACCACTCATATCTCCAGGTTCCAATTCCCAGCCACAAGAACGTGAAGAAAAATTTCATCGACAACAATCTAGAGACCAACCTAGATCTGGCATGCAGCAAAAGCAAGCGCCAATTTTGGGTCAGAACCAAAACAATACATCTGAGTCTCAACAAGACAGCGGCCATTCACAAGGCTTCGATAGACATGGTCCTCATGGCCGTTTTCCCCCTCAAAACTTTGACGCACAGGGTGCTCCACATCAGGAGTCCGGTCAGTTTTCAGAGAAACAGCAAGGAATTCTATCCGACACTCCATATTCTCAGTATCCTCCTTTGCAACCAATTCCGCCACCAAATTATGTGGTTCCACCTAACTCTAATCCAATGTTGACCCCCCCTCTACCATTTGGTTATCCTCCTTTTCCAGTTGAGGGAGCTCAACAATATTACAGTACACCCTATGAAGTGCCACGGCAGGACACTGCAGCAGCAGAGACTGGATCCGAGCAAGGGTCACTGCTAGGCTTTCCACCAGGTGCAGCAGGAGGAATGAATTTCTCAGCAACTTATCCGCACCCTTGGAATGCTGGACAAGCCGGTATTCCTTATGATCATGCTGCTGGAGGTCAAGGAATGCCCGATGCTTTTGCTAATACGCCTGATTCTCAAGGAAAACATGGATTTTATCCAGGAGATTATAGACGCAGCCCTGGAGGCATGCCTGTGAATTCTACTGTCTCGTCTATGGCCAACAAAGGGATGGATCAGGGGCATGCATCAGGTAGTACGATGGACCTAAGGGATGGTAAAGGTATATTGGCACCACAGCCTCTAATACAATTGCCCCCACCCCCACGACCCCCACCGTTCTTGTCGCATAACAAGCGGGGTAAGTTTTATCCAGGAGATATGGATCATGATGGGCAAAACCTTGGATGGCAGAATGACAACCATAGCCGAGATAGCTTTGGAAGTGGCCAAGACTGA | 1521 | 48.85 | MLQIRLSKVPQAEGGAGAVKPSPAESVTVACPDHLVLADLPVAKGIGAATAASIVKSVGRRSRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSLCYLCDDRIQKIQTIKMMEGIFICAAPHCLKSFLKRTDFESHIHESHADLLKPNAEKEDGNEIEAHSAKQSTASETSVRGPLRPLISPGSNSQPQEREEKFHRQQSRDQPRSGMQQKQAPILGQNQNNTSESQQDSGHSQGFDRHGPHGRFPPQNFDAQGAPHQESGQFSEKQQGILSDTPYSQYPPLQPIPPPNYVVPPNSNPMLTPPLPFGYPPFPVEGAQQYYSTPYEVPRQDTAAAETGSEQGSLLGFPPGAAGGMNFSATYPHPWNAGQAGIPYDHAAGGQGMPDAFANTPDSQGKHGFYPGDYRRSPGGMPVNSTVSSMANKGMDQGHASGSTMDLRDGKGILAPQPLIQLPPPPRPPPFLSHNKRGKFYPGDMDHDGQNLGWQNDNHSRDSFGSGQD | 506 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 399718 | 403977 | - | Cp4.1LG03g02660.1 | Cpe03g00074 | 465791 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g00074 | 506 | MobiDBLite | consensus disorder prediction | 151 | 304 | - | - | |
Cpe03g00074 | 506 | MobiDBLite | consensus disorder prediction | 287 | 304 | - | - | |
Cpe03g00074 | 506 | ProSitePatterns | Zinc finger RING-type signature. | 89 | 98 | IPR017907 | - | |
Cpe03g00074 | 506 | MobiDBLite | consensus disorder prediction | 455 | 469 | - | - | |
Cpe03g00074 | 506 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 124 | 150 | IPR013087 | - | |
Cpe03g00074 | 506 | MobiDBLite | consensus disorder prediction | 488 | 506 | - | - | |
Cpe03g00074 | 506 | MobiDBLite | consensus disorder prediction | 261 | 286 | - | - | |
Cpe03g00074 | 506 | MobiDBLite | consensus disorder prediction | 151 | 167 | - | - | |
Cpe03g00074 | 506 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED | 1 | 473 | IPR040383 | GO:0016567|GO:0061630 | |
Cpe03g00074 | 506 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 126 | 149 | IPR013087 | - | |
Cpe03g00074 | 506 | MobiDBLite | consensus disorder prediction | 433 | 506 | - | - | |
Cpe03g00074 | 506 | CDD | RING-HC_HAKAI_like | 71 | 107 | IPR040380 | - | |
Cpe03g00074 | 506 | MobiDBLite | consensus disorder prediction | 210 | 242 | - | - | |
Cpe03g00074 | 506 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 124 | IPR013083 | - | |
Cpe03g00074 | 506 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE HAKAI | 1 | 473 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g00074 | Cpe08g01201 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00074 | Cpe-Chr3:399718 | Cpe08g01201 | Cpe-Chr8:8814222 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g00074 | K15685 | - | csv:101220422 | 801.971 |