Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00074 ATGCTTCAGATCCGGCTTAGCAAAGTTCCACAGGCTGAAGGTGGTGCTGGGGCAGTGAAGCCCTCGCCGGCGGAGTCTGTGACGGTCGCATGCCCTGACCACCTCGTTCTTGCTGATCTCCCTGTAGCAAAAGGCATTGGTGCGGCTACCGCTGCTTCCATTGTCAAGTCTGTGGGTCGCAGGTCTCGCCGTCAGCTTGGAGAACGAGTTCATTTTTGTGTCAGATGCGACTTTCCTATTGCAATTTATGGTCGCCTGAGTCCCTGTGAGCATGCCTTCTGTCTTGATTGTGCAAGAAGCGATTCTTTGTGCTACCTTTGTGATGACCGCATCCAGAAGATTCAAACTATAAAAATGATGGAGGGGATCTTCATTTGTGCAGCCCCACACTGTCTCAAGTCTTTTCTAAAGAGGACTGATTTCGAATCTCATATACACGAGAGCCATGCTGACCTTCTTAAGCCAAATGCAGAGAAGGAAGATGGAAATGAAATTGAGGCCCATAGTGCTAAACAATCTACAGCTTCTGAGACGTCAGTCCGAGGTCCATTGAGACCACTCATATCTCCAGGTTCCAATTCCCAGCCACAAGAACGTGAAGAAAAATTTCATCGACAACAATCTAGAGACCAACCTAGATCTGGCATGCAGCAAAAGCAAGCGCCAATTTTGGGTCAGAACCAAAACAATACATCTGAGTCTCAACAAGACAGCGGCCATTCACAAGGCTTCGATAGACATGGTCCTCATGGCCGTTTTCCCCCTCAAAACTTTGACGCACAGGGTGCTCCACATCAGGAGTCCGGTCAGTTTTCAGAGAAACAGCAAGGAATTCTATCCGACACTCCATATTCTCAGTATCCTCCTTTGCAACCAATTCCGCCACCAAATTATGTGGTTCCACCTAACTCTAATCCAATGTTGACCCCCCCTCTACCATTTGGTTATCCTCCTTTTCCAGTTGAGGGAGCTCAACAATATTACAGTACACCCTATGAAGTGCCACGGCAGGACACTGCAGCAGCAGAGACTGGATCCGAGCAAGGGTCACTGCTAGGCTTTCCACCAGGTGCAGCAGGAGGAATGAATTTCTCAGCAACTTATCCGCACCCTTGGAATGCTGGACAAGCCGGTATTCCTTATGATCATGCTGCTGGAGGTCAAGGAATGCCCGATGCTTTTGCTAATACGCCTGATTCTCAAGGAAAACATGGATTTTATCCAGGAGATTATAGACGCAGCCCTGGAGGCATGCCTGTGAATTCTACTGTCTCGTCTATGGCCAACAAAGGGATGGATCAGGGGCATGCATCAGGTAGTACGATGGACCTAAGGGATGGTAAAGGTATATTGGCACCACAGCCTCTAATACAATTGCCCCCACCCCCACGACCCCCACCGTTCTTGTCGCATAACAAGCGGGGTAAGTTTTATCCAGGAGATATGGATCATGATGGGCAAAACCTTGGATGGCAGAATGACAACCATAGCCGAGATAGCTTTGGAAGTGGCCAAGACTGA 1521 48.85 MLQIRLSKVPQAEGGAGAVKPSPAESVTVACPDHLVLADLPVAKGIGAATAASIVKSVGRRSRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSLCYLCDDRIQKIQTIKMMEGIFICAAPHCLKSFLKRTDFESHIHESHADLLKPNAEKEDGNEIEAHSAKQSTASETSVRGPLRPLISPGSNSQPQEREEKFHRQQSRDQPRSGMQQKQAPILGQNQNNTSESQQDSGHSQGFDRHGPHGRFPPQNFDAQGAPHQESGQFSEKQQGILSDTPYSQYPPLQPIPPPNYVVPPNSNPMLTPPLPFGYPPFPVEGAQQYYSTPYEVPRQDTAAAETGSEQGSLLGFPPGAAGGMNFSATYPHPWNAGQAGIPYDHAAGGQGMPDAFANTPDSQGKHGFYPGDYRRSPGGMPVNSTVSSMANKGMDQGHASGSTMDLRDGKGILAPQPLIQLPPPPRPPPFLSHNKRGKFYPGDMDHDGQNLGWQNDNHSRDSFGSGQD 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 399718 403977 - Cp4.1LG03g02660.1 Cpe03g00074 465791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00074 506 MobiDBLite consensus disorder prediction 151 304 - -
Cpe03g00074 506 MobiDBLite consensus disorder prediction 287 304 - -
Cpe03g00074 506 ProSitePatterns Zinc finger RING-type signature. 89 98 IPR017907 -
Cpe03g00074 506 MobiDBLite consensus disorder prediction 455 469 - -
Cpe03g00074 506 ProSiteProfiles Zinc finger C2H2 type domain profile. 124 150 IPR013087 -
Cpe03g00074 506 MobiDBLite consensus disorder prediction 488 506 - -
Cpe03g00074 506 MobiDBLite consensus disorder prediction 261 286 - -
Cpe03g00074 506 MobiDBLite consensus disorder prediction 151 167 - -
Cpe03g00074 506 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 473 IPR040383 GO:0016567|GO:0061630
Cpe03g00074 506 ProSitePatterns Zinc finger C2H2 type domain signature. 126 149 IPR013087 -
Cpe03g00074 506 MobiDBLite consensus disorder prediction 433 506 - -
Cpe03g00074 506 CDD RING-HC_HAKAI_like 71 107 IPR040380 -
Cpe03g00074 506 MobiDBLite consensus disorder prediction 210 242 - -
Cpe03g00074 506 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 124 IPR013083 -
Cpe03g00074 506 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI 1 473 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00074 Cpe08g01201 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00074 Cpe-Chr3:399718 Cpe08g01201 Cpe-Chr8:8814222 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00074 K15685 - csv:101220422 801.971