Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00101 ATGGCCCAACTCTGTTTTCTCTGTTTCTTCTTCTTCTTCTTCCTCTTCTTCGCCGGCCCCGCCGCATCTCAGCAGCTCTACTTCGCCGGATTCCACGACTCCGCCGCTGTCGCTGCCAACTTAACCCTCACTGACATCGCCAAGATCGAGCAGAACGGAATCTTAAAGCTCACGAACGACACCAGTCGATTACAGGGCCATGCCTTTTACAGTTCCCCTGTTCGCTTCAAAAACTCCTCCGACGGCAAAGCTTTTTCGTTCTCCACCGCTTTTTCCATCGCCGTCGTCCCCGAGTACCCGACCCTCGGTGGCCATGGCCTCGCCTTCACCATTGCGCAGTCGAAGAACCTCCGTGGACTTCCCAGTCAGTATTTGGGCCTTCTCAATGCGACCGACGTTGGGAACTTCTCGAACCATCTCTTCGCCGTGGAGTTTGACACCGTTCAAGATTTCGAGTTCGGCGACATCAACGACAACCACGTCGGAATTAATCTCAACAATATGGTCTCTAATGCCTCCACCACCGCTTCCTATTTCGTTGATGATGGACCCACCAAGCAAAACCTGACCCTAAAAAGTGGGAGGCCGATTCAAGCTTGGATCGATTACAATTCCGCTGTAAATTCCCTGACCGTGGCGCTTTCTCCGTTCTCCACTAAACCCAAGAAGCCGATTCTGTCGTTTAATGTAGATCTCTCTCCGATTCTTCACGAGTTTATGTATGTTGGGTTCTCCGCCTCGACTGGGCTTCTTGCAAGCTCTCACTATGTGTTGGGATGGAGTTTCAGTATGAATGGACCAGCCCAATCTCTGGATCTTTCTTCTTTGCCTTCTGTTCCTGGTCCGAAGAAGAAGCACACTGCCTTTACAATTGGGGTTTCTGTTGGGGCCGTTTTGATTGTAGCAATTGCAATTGGCGTTGCTGTTTTTATCGTATGGAAGATAAAAAACGCGGACATAATCGAGGCCTGGGAGCTTGAAATCGGCCCTCATCGGTACTCTTACAAGGAGCTCAAGCAGGCGACTAAACGATTTAGGGACAAAGAGCTTCTAGGGCGCGGTGGGTTTGGGAAAGTTTACAAAGGGACTTTGCGGAAATCGAAAACCGTAGTGGCTGTGAAGCGAATCTCTCATGAATCGAAACAGGGCCTGAGGGAATTTGTGTCGGAAATCGCTAGCATTGGCCGGCTTCGACACCGGAACTTGGTTCAGTTGCTGGGATGGTGTCGCCGCCGTGGGGATCTGCTTCTGGTTTATGAATTTATGGCTAATGGGAGCTTGGATAGCTACATTTTCGATGAGCCGGAAGCGGTTCTGAGTTGGGAACAGAGATTCAGAATCATCAAGGGCGTCGCCTCTGGTTTGCTGTACTTACACGAAGGCTACGAGCAGGTGGTGATTCATAGAGATGTGAAGGCCAGTAATGTCCTGCTCGACAGCGAGATGAATGGAAAGCTGGGCGATTTCGGCCTGGCTCGGCTATACGAACACGGGGCGAACCCGAGCACGACTCGGGTGGTGGGAACTCTGGGATATCTGGCGCCGGAGCTACACAGAACAGGAAAAGCCACGACTAGCTCAGATGTGTACGCCTTCGGCGCACTTCTGCTGGAAGTGGCCTGCGGACGTCGACCGATCGACCCAAAATCTCGGTCGGAGGAGCTGGTGCTGGTGGATTGGGTGTGGGAGAATTACAGGGAAGGGAGATTAATGGAAGCAATGGATCCAAAACTGAAAGGGGATTACAATGCGGTGGAGGCAGTGATGATATTGAAATTGGGGTTATTCTGTTCGAACGATTCGGCGGCGGGGCGGCCGAGTATGAGGCAGGTGGTGCGGTATTTGGAGGGGGAAAATGGAGTGCCGGAGGAGATATCGGCACCGAAAGTGGTGGAGGGAGGGAAGAACGGGGAAGGGTTCGATGATTTTGTGAATTCGTTTGCTTCAACATGCTCGTATTCGCGTACCGGAAATGATAATAATAATATGGATACGGATATGAGTTTTGCTTCATTTTCCACTTCTCCTCTTTCGCTTCTCAATGGCAGAGACTGA 2055 51.29 MAQLCFLCFFFFFFLFFAGPAASQQLYFAGFHDSAAVAANLTLTDIAKIEQNGILKLTNDTSRLQGHAFYSSPVRFKNSSDGKAFSFSTAFSIAVVPEYPTLGGHGLAFTIAQSKNLRGLPSQYLGLLNATDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGINLNNMVSNASTTASYFVDDGPTKQNLTLKSGRPIQAWIDYNSAVNSLTVALSPFSTKPKKPILSFNVDLSPILHEFMYVGFSASTGLLASSHYVLGWSFSMNGPAQSLDLSSLPSVPGPKKKHTAFTIGVSVGAVLIVAIAIGVAVFIVWKIKNADIIEAWELEIGPHRYSYKELKQATKRFRDKELLGRGGFGKVYKGTLRKSKTVVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYEFMANGSLDSYIFDEPEAVLSWEQRFRIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSEMNGKLGDFGLARLYEHGANPSTTRVVGTLGYLAPELHRTGKATTSSDVYAFGALLLEVACGRRPIDPKSRSEELVLVDWVWENYREGRLMEAMDPKLKGDYNAVEAVMILKLGLFCSNDSAAGRPSMRQVVRYLEGENGVPEEISAPKVVEGGKNGEGFDDFVNSFASTCSYSRTGNDNNNMDTDMSFASFSTSPLSLLNGRD 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 521855 528435 + Cp4.1LG03g02460.1 Cpe03g00101 465818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00101 684 ProSiteProfiles Protein kinase domain profile. 345 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00101 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Cpe03g00101 684 Gene3D Transferase(Phosphotransferase) domain 1 422 630 - -
Cpe03g00101 684 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 8 672 - -
Cpe03g00101 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 284 IPR013320 -
Cpe03g00101 684 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
Cpe03g00101 684 PANTHER - 8 672 - -
Cpe03g00101 684 Gene3D - 25 274 - -
Cpe03g00101 684 SUPERFAMILY Protein kinase-like (PK-like) 327 630 IPR011009 -
Cpe03g00101 684 CDD lectin_legume_LecRK_Arcelin_ConA 28 266 IPR001220 GO:0030246
Cpe03g00101 684 CDD STKc_IRAK 351 617 - -
Cpe03g00101 684 Pfam Protein kinase domain 346 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00101 684 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Cpe03g00101 684 Pfam Legume lectin domain 25 276 IPR001220 GO:0030246
Cpe03g00101 684 SMART serkin_6 345 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00101 Cpe-Chr3:521855 Cpe08g01239 Cpe-Chr8:8981149 1.32E-06 dispersed
Cpe03g00171 Cpe-Chr3:847888 Cpe03g00101 Cpe-Chr3:521855 3.08E-69 dispersed
Cpe08g01106 Cpe-Chr8:8361728 Cpe03g00101 Cpe-Chr3:521855 5.57E-12 dispersed
Cpe10g00930 Cpe-Chr10:5199079 Cpe03g00101 Cpe-Chr3:521855 9.24E-14 dispersed
Cpe12g00092 Cpe-Chr12:548387 Cpe03g00101 Cpe-Chr3:521855 1.99E-14 dispersed
Cpe17g00250 Cpe-Chr17:1652524 Cpe03g00101 Cpe-Chr3:521855 8.24E-07 dispersed
Cpe10g00899 Cpe-Chr10:5048944 Cpe03g00101 Cpe-Chr3:521855 0 wgd
Cpe19g00338 Cpe-Chr19:2992737 Cpe03g00101 Cpe-Chr3:521855 2.05E-29 wgd
Cpe03g00101 Cpe-Chr3:521855 Cpe08g01172 Cpe-Chr8:8690103 1.79E-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62267 PF00069 Pkinase 1.30E-47 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00101 - - csv:101223168 1179.85