Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00124 ATGGCCGAGCGAGCTCGAATGGCTAATATTCCCATGCCTGAGGCAGCATTGAAATGCCCAAGATGTGATTCAACCAACACTAAGTTCTGCTACTTCAACAATTACAGCCTCACTCAACCTCGTCACTTTTGTAAGACATGTCGAAGGTACTGGACTAGAGGTGGGACGCTGCGAAGCGTTCCGGTCGGGGGTGGGTGCCGGAGGAACAAAAGAAGCAAAGGGAGAAGTTCAAAGTCGCCGCCGGTCAGTTCCGACCGACAACAAACCTGTGGTTCAGGGAATTCCTCATCAAGTGCAATAGCTTCCAACAACAGTGGAGGTCTTTCCCCACAGATTCCACCTCTCCGCTTCATGGCTCCTCTCCACCAACAACTCAGCGACTTCGACATCAGTGGCTTCAACTACAGCGGTGGCCTCTCAGCTCCGGCCACCGTTACCGGCGACCTGAATTTCCAATTGGGCAACACTAATTTAGGTGGAGGAACAAGCATTGGATCTCTCTTGGGATTTGACCAACAATGGCGGCTCCAACAACAAGCTCCTCAATTTCCCTTCTTTTCCGGGTTAGACCCTTTCGACGGTGGTAGCAGTAGCGGCGGCGACGGACCCAGCTGGGAAATGAGGCAAAAATTACCATCAAGCTCAAGGAATTTAACCCAAATGGGGAATTCAGTAAAAATGGAAGAAACCCCAGATCAAGGTAATAACATTGGAAGACAATTAGTTGGCAATGAACAATATTGGAGCAGTGGATCAATGGGATGGTCGGATCCTTCTGGTTTCAGTTCTTCATCTTCAACAAGAAACCCATTATAG 816 49.26 MAERARMANIPMPEAALKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGTLRSVPVGGGCRRNKRSKGRSSKSPPVSSDRQQTCGSGNSSSSAIASNNSGGLSPQIPPLRFMAPLHQQLSDFDISGFNYSGGLSAPATVTGDLNFQLGNTNLGGGTSIGSLLGFDQQWRLQQQAPQFPFFSGLDPFDGGSSSGGDGPSWEMRQKLPSSSRNLTQMGNSVKMEETPDQGNNIGRQLVGNEQYWSSGSMGWSDPSGFSSSSSTRNPL 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 627920 629306 + Cp4.1LG03g02360.1 Cpe03g00124 465841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00124 271 MobiDBLite consensus disorder prediction 61 106 - -
Cpe03g00124 271 ProSitePatterns Zinc finger Dof-type signature. 19 55 IPR003851 GO:0003677|GO:0006355
Cpe03g00124 271 MobiDBLite consensus disorder prediction 185 271 - -
Cpe03g00124 271 MobiDBLite consensus disorder prediction 208 271 - -
Cpe03g00124 271 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 267 IPR045174 GO:0003700|GO:0006355
Cpe03g00124 271 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 1 267 - -
Cpe03g00124 271 Pfam Dof domain, zinc finger 16 71 IPR003851 GO:0003677|GO:0006355
Cpe03g00124 271 MobiDBLite consensus disorder prediction 76 106 - -
Cpe03g00124 271 ProSiteProfiles Zinc finger Dof-type profile. 17 71 IPR003851 GO:0003677|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00124 Cpe10g00881 CCT
Cpe03g00124 Cpe08g01160 CCT
Cpe03g00124 Cpe10g00881 ECH
Cpe03g00124 Cpe08g01160 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00186 Cpe-Chr1:1055284 Cpe03g00124 Cpe-Chr3:627920 2.30E-43 wgd
Cpe01g01095 Cpe-Chr1:6475077 Cpe03g00124 Cpe-Chr3:627920 5.56E-43 wgd
Cpe10g00881 Cpe-Chr10:4961166 Cpe03g00124 Cpe-Chr3:627920 2.04E-42 wgd
Cpe13g00850 Cpe-Chr13:7470504 Cpe03g00124 Cpe-Chr3:627920 3.53E-42 wgd
Cpe16g00602 Cpe-Chr16:6669904 Cpe03g00124 Cpe-Chr3:627920 3.31E-37 wgd
Cpe20g00813 Cpe-Chr20:7378828 Cpe03g00124 Cpe-Chr3:627920 2.51E-49 wgd
Cpe03g00124 Cpe-Chr3:627920 Cpe05g00913 Cpe-Chr5:6006866 7.46E-38 wgd
Cpe03g00124 Cpe-Chr3:627920 Cpe08g01160 Cpe-Chr8:8615889 4.49E-132 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49135 PF02701 zf-Dof 4.40E-32 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00124 - - cpep:111791192 437.573