Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00132 ATGGGAGAAGAAGCAGCTGGGTTGGCTGCAGTTACAAATGAGCCGTTGGGGAAAGAGAGCGCTCCGAGTACCGAATTGAAGCGGGACCATCAGTGTCTTGATGAAGATACGGAACCCGAGGCTTTTCACAACAAGAAGCAGGCTAAAGAAGTGTCGAATGAAGATGTTCGTTCAGAAGTTTCGAATCCCGTAATTTCTCCGAAAGGGAATCATTTCCAAGATATTACCAGCCAACCTGAGGAGCAAGAAAATACCAACCAAGTTGAGCGTGGGGACCTTACCTCGGCTTGTTCGGGTAATTCAAGCTCGGAGGACATCTCTAGTAATGGAGTTCGTTGCCAGAATGACACGTCTCGAAATGACGTTGATATGTGTGATGTTGATGAGGTCTCTCGGTTTGTGATTGAAATACCCAAGCATGCTAGTTCAACTGGAATTAGAAAAATTACGTTCAAGTTCAGCAAAAAAAAGGACAAAATTGACGCATCCATGTCAGCAGACAAAGTTCGTTCATATGGGAACTTCGACAAGGACTGTAAACCAGAACCTTCACTGGTGGACGATGCTTGTACGGAGACATCTGCACATAGCTGGGAAGGCATTGCTGAGAGCAGCAGGCATCCTTTAGGTTCAAATAAAATGGAATTGAAAATGTCGAAGAAGGTTTTACCAAACAATTACCCGTCGAATGTTAAAAAGCTACTGTCGACTGGTATACTTGACGGAGCTCGAGTCAAGTATATATCTACGACAAGCGAGATGAAGCTACATGGTATTATAAATGGCGGAGGTTATATGTGCGGATGTTCAATATGCAATTTTACAACTATCCTCAGTGCTTATGAGTTTGAGCAGCACGCTGGTTTCAAGACTAGACATCCAAATAATCATATATACCTGGAGAATGGGAGGCCAATTTATAGTGTCATACAGGAAATTAAGAGTGCACCTCTTAGCATATTAGATGAAGTGATTAAGGAAGTAGCGGGTTCATGTATTAACGTGGATTCATTTGAGGATTGGAAAGCAAATTTCCACCAGAACAGTGCAATTATTGAAGTGGAAAATGATGATGTGAAGGTTCCTAAATTGTCACATCCCATTGACAGGCCAATCCCTAATTTATCCAACCCAGTCATGCAACAGAAGAAAACGGCAGAAAAAGGCACAAAAAGAAGGGATAATGATCTCCACAGGCTACTTTTCATGCCAAATGGGCTTCCAGATGGGGCTGAGCTGGCATACTTCGTCAAAGGACAGAGAATACTTGTAGGCTACAAGCAAGGAAATGGCATACTCTGTAGTCACTGTAATCGAGAGATCAGCCCTTCACAGTTTGAAGCCCATGCAGGGATGGCTGCCAGACGTCAGCCCTACCGCCACATTTATACTACAAATGGACTTACGCTTCATGATATAGCCATTTCCTTGGCTAGTGGGCAAAAACTTACCACAGGAGATAGTGATGATATGTGCGCTACATGTGGTAATGGAGGGGATTTGATTTTCTGTGATCGCTGCCCTCGAGCTTTCCATACAGGCTGCCTGCATCTACAGAATGTTCCTGAAGGAGTTTGGTCTTGCCCAAACTGTAGAGATAAAGTGGGTTCCAATTTGAAGGCTCCTTCCGGAGGTTCTTTGAGTTTTTCAAAACCAATTGTATTTAGGTTGACACGAGTTGTTAAAGCACCTGAATATGAAATTGGTGGTTGTGTTGTTTGCAGGCGACATGATTTCAGTGCCGCTAAATTTGATGATCGAACTGAACTTCCCAAGGACAAGTGGTTCTGCTGTGACGAGTGCAGTAATATCCATGTGGCTTTTCAGAATACAGTTTTGAACGGGGCACAGATCATTCCAGATTCCTTATCAGATTTAATAATTAGGAAGCATGTTGGAAAAGGATTACCAGTTGATGGAGCTCTTAATGATGTTCGGTGGCAAATTTTAAGTGGAAAAAGTCGCTTCCCAGAAGATCTTCCATTTCTTTCGAGGGCAACTGCTATTTTTCGGGAATGTTTTGATCCTATTGTTGCAAAATCAGGTCGTGATCTGATTCCTGTTATGGTTTATGGGAGAAATATATCTGGGCAAGAGTTTGGAGGAATGTATTGCGTTGTTTTAATTGTGAGATCGATAGTTGTATCGGCTGGTCTTCTTAGGATATTTGGTCGTGAAGTTGCTGAGCTTCCTATTGTTGCCACAAGTCGAGAACATCAGGGCAGGGGTTATTTCCAAGTATTGTTTTCCTGTATAGAGCGGCTACTTTCTTCCCTGAATGTGCAAAACCTTGTACTCCCTGCAGCCGAGGATGCTGAATCAATTTGGACTAAGAAATTGGGCTTCAGAAAGATGAGTGAAGAACAATTGATGAAGTATATGAGGGAGGTCCAGCTGACGATCTTCAACGGAACATCGATGCTAGAGAAGGTGGTCCAGCAGTCGACGTTGACATGA 2457 43.14 MGEEAAGLAAVTNEPLGKESAPSTELKRDHQCLDEDTEPEAFHNKKQAKEVSNEDVRSEVSNPVISPKGNHFQDITSQPEEQENTNQVERGDLTSACSGNSSSEDISSNGVRCQNDTSRNDVDMCDVDEVSRFVIEIPKHASSTGIRKITFKFSKKKDKIDASMSADKVRSYGNFDKDCKPEPSLVDDACTETSAHSWEGIAESSRHPLGSNKMELKMSKKVLPNNYPSNVKKLLSTGILDGARVKYISTTSEMKLHGIINGGGYMCGCSICNFTTILSAYEFEQHAGFKTRHPNNHIYLENGRPIYSVIQEIKSAPLSILDEVIKEVAGSCINVDSFEDWKANFHQNSAIIEVENDDVKVPKLSHPIDRPIPNLSNPVMQQKKTAEKGTKRRDNDLHRLLFMPNGLPDGAELAYFVKGQRILVGYKQGNGILCSHCNREISPSQFEAHAGMAARRQPYRHIYTTNGLTLHDIAISLASGQKLTTGDSDDMCATCGNGGDLIFCDRCPRAFHTGCLHLQNVPEGVWSCPNCRDKVGSNLKAPSGGSLSFSKPIVFRLTRVVKAPEYEIGGCVVCRRHDFSAAKFDDRTELPKDKWFCCDECSNIHVAFQNTVLNGAQIIPDSLSDLIIRKHVGKGLPVDGALNDVRWQILSGKSRFPEDLPFLSRATAIFRECFDPIVAKSGRDLIPVMVYGRNISGQEFGGMYCVVLIVRSIVVSAGLLRIFGREVAELPIVATSREHQGRGYFQVLFSCIERLLSSLNVQNLVLPAAEDAESIWTKKLGFRKMSEEQLMKYMREVQLTIFNGTSMLEKVVQQSTLT 818
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 661351 669005 + Cp4.1LG03g02380.1 Cpe03g00132 465849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00132 818 Pfam Tify domain binding domain 258 312 IPR032308 -
Cpe03g00132 818 Pfam Tify domain binding domain 425 474 IPR032308 -
Cpe03g00132 818 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 480 554 IPR013083 -
Cpe03g00132 818 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 696 791 IPR016181 -
Cpe03g00132 818 SMART PHD_3 491 532 IPR001965 -
Cpe03g00132 818 ProSiteProfiles Zinc finger PHD-type profile. 489 534 IPR019787 -
Cpe03g00132 818 ProSitePatterns Zinc finger PHD-type signature. 492 531 IPR019786 -
Cpe03g00132 818 Pfam PHD-finger 491 533 IPR019787 -
Cpe03g00132 818 MobiDBLite consensus disorder prediction 1 114 - -
Cpe03g00132 818 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 35 355 - -
Cpe03g00132 818 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 368 814 - -
Cpe03g00132 818 SUPERFAMILY FYVE/PHD zinc finger 479 534 IPR011011 -
Cpe03g00132 818 MobiDBLite consensus disorder prediction 57 114 - -
Cpe03g00132 818 MobiDBLite consensus disorder prediction 21 56 - -
Cpe03g00132 818 MobiDBLite consensus disorder prediction 365 392 - -
Cpe03g00132 818 Gene3D - 653 812 - -
Cpe03g00132 818 PANTHER AUTOIMMUNE REGULATOR 35 355 - -
Cpe03g00132 818 PANTHER AUTOIMMUNE REGULATOR 368 814 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00132 Cpe08g01153 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00132 Cpe-Chr3:661351 Cpe09g00545 Cpe-Chr9:3661149 2.87E-171 dispersed
Cpe01g00193 Cpe-Chr1:1091374 Cpe03g00132 Cpe-Chr3:661351 4.17E-43 wgd
Cpe01g01104 Cpe-Chr1:6521592 Cpe03g00132 Cpe-Chr3:661351 1.43E-38 wgd
Cpe16g00590 Cpe-Chr16:6625512 Cpe03g00132 Cpe-Chr3:661351 3.38E-43 wgd
Cpe03g00132 Cpe-Chr3:661351 Cpe05g00901 Cpe-Chr5:5948305 5.67E-41 wgd
Cpe03g00132 Cpe-Chr3:661351 Cpe08g01153 Cpe-Chr8:8575977 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49136 PF16135 TDBD 2.80E-12 No_clan Cpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00132 - - cmax:111481523 1584.7