Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00140 ATGCCGAGAAAAGGAATGAGGAGTCTCCTTTTCCAGTTCTCGTCGCCGTCGAATTCCATTTCTAGGTATTCGATCTCGTCGCCGTCGAGATCTCCGGCCTTGACTCCTCGGCGGAGCTTCAACGATGCGATGATCGAACAGAGCATCGAATCTGCGGCCGCGATTGTGATGAAATGGAATCCGGATTCTTCAACTTATGCTAAAGTTACTTCGATGTTTTATGAAGACAGAAACGAAGCCATGCAGTTCATTAAGCGCGTGAATGATCTTCAAAAAGCGATGCATCTGATGGTTTCGGAAGATTCCGGTTTCGCTTCCGATAGGCTTGTTTACGCTCAAGGTTTGATGGAAATCGCAATGAAAAGGCTTCAGAAGGAGTTTTATCAGATTCTCTCTATGAACCGCGCTCATCTCGATCCGGAATCTGTTTCGGCTCGATCCTCCCGCTGCTCCACCAGATCGAGCACTTCCGCTGATTTCGACGATGACGGAACCCTAGACGATGAAGTCCAAGTCGTAGGCGATTCGATCGCTGAAGTTGAGCAAGTTTCTTCCATCGTTATGGAGGATTTACGAACCATAGCTGAGTGCATGATCTCATCTGGATACGCTAAAGAGTGCGTTAATATGTATAAAGTGATTCGAAAATCGATTATCGATGAAGGTGTGTACCGCCTCGGTCTTGAGAAATTGAGCCCTTCGCGAATCAACAAGATGGATTGGGAGGTGCTTGATCTTAAAATCAAGAACTGGTTGGATGCAATTAAACTCGCAATTAGAACGCTGTTCGTTGGTGAACGAATTCTCTGCGACAACGTTTTTTCCTCGTCTGAATCGATTAGAGAATCCTGTTTTGCTGATATATCCAGAGAAGGCGCTCTGCTTCTGTTTGGATTCCCTGAACTTGTAGCTAAGAGTAAAAAATCTCCGGAGAAAATGTTCCGTGTTCTTGATATGTACTCATCAATCGCCGAAAATTGGCCGGAGATCGAATCGATTTTCTCGTCTGAGTCCTCATCTGTAGTTCGATCTCAAGCTCTGACCTCACTCGCGAAGCTTGGCGAGTTAGTCCGTGCCATAGTGATGGATCTCGAATTCTCAATTCAGAAAAATTCATCCAAATCGCCGGTCGCTGGCGGAGGTGTTCATTCTTTAACGCTTCTCTCAATGAACTACCTCACTTTCCTCGCCGATTACGGCAACGTTTTGACGGATATTTTCGCCGATTGGATTCCGCAAGACAAGTCCTCTCTGGAACAAATTTTCTTCGGCAGTTCAGACTCCGACGACTCTCCAACGGCTTCTGCAATCTCTTTGCGAATGGGATGGTTAATTCTAGTCCTACTCTGCAAACTCGACAGCAAAGCGAAACGCTACAAAGACGTTTCACTCTCGTATCTATTCCTCGCTAACAATCTTCAACACATCGTCTCTAAAGTCCGATCGTCGAATCTTCATTACCTTCTCGGCGACGAGTGGATCGCGAAGCACGAGGCCAAAGTAAGGCAATTTGCAGCCAAATACGAGGCATTGGCTTGGGGCAGAGTCTTCGATTCCTTGCCGGAGAATCCAACCGAAAAATTTTCACAAGAGGAAGTCAAAGAAATCTTCAGGAACTTCAATATGGCATTCCAAGAAACTCATCGGAAACAGAAATCCTGCTTCATTCCTGATCCAAAGCTTCGAGACGAAGTTAAACTATCAATAGGTAGGAAGCTCGTTTCGTTCTATGGAGAATTTTACAGAGCGCAGAAAGCCTACGCCGGTGCTAATGAAAAGCCGTACATCAGATTCTCCCCGGAAGATATCGGTAACTACCTTTCAGATCTCTATTTTGAACCGTCAGATTGGGCGAGCGTTTCCACCTCGTCGCCGTCGTCCACCTCCTCCTCTCACCGGCGGGAACCGGGCCCCCGTTAA 1920 46.61 MPRKGMRSLLFQFSSPSNSISRYSISSPSRSPALTPRRSFNDAMIEQSIESAAAIVMKWNPDSSTYAKVTSMFYEDRNEAMQFIKRVNDLQKAMHLMVSEDSGFASDRLVYAQGLMEIAMKRLQKEFYQILSMNRAHLDPESVSARSSRCSTRSSTSADFDDDGTLDDEVQVVGDSIAEVEQVSSIVMEDLRTIAECMISSGYAKECVNMYKVIRKSIIDEGVYRLGLEKLSPSRINKMDWEVLDLKIKNWLDAIKLAIRTLFVGERILCDNVFSSSESIRESCFADISREGALLLFGFPELVAKSKKSPEKMFRVLDMYSSIAENWPEIESIFSSESSSVVRSQALTSLAKLGELVRAIVMDLEFSIQKNSSKSPVAGGGVHSLTLLSMNYLTFLADYGNVLTDIFADWIPQDKSSLEQIFFGSSDSDDSPTASAISLRMGWLILVLLCKLDSKAKRYKDVSLSYLFLANNLQHIVSKVRSSNLHYLLGDEWIAKHEAKVRQFAAKYEALAWGRVFDSLPENPTEKFSQEEVKEIFRNFNMAFQETHRKQKSCFIPDPKLRDEVKLSIGRKLVSFYGEFYRAQKAYAGANEKPYIRFSPEDIGNYLSDLYFEPSDWASVSTSSPSSTSSSHRREPGPR 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 707814 709733 + Cp4.1LG03g02090.1 Cpe03g00140 465857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00140 639 Gene3D Exocyst complex component Exo70 56 617 - -
Cpe03g00140 639 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 622 IPR004140 GO:0000145|GO:0006887
Cpe03g00140 639 MobiDBLite consensus disorder prediction 617 639 - -
Cpe03g00140 639 MobiDBLite consensus disorder prediction 144 159 - -
Cpe03g00140 639 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 622 - -
Cpe03g00140 639 SUPERFAMILY Cullin repeat-like 76 611 IPR016159 -
Cpe03g00140 639 MobiDBLite consensus disorder prediction 142 165 - -
Cpe03g00140 639 Pfam Exo70 exocyst complex subunit 249 609 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00140 Cpe-Chr3:707814 Cpe02g01761 Cpe-Chr2:14340568 3.31E-97 dispersed
Cpe01g00211 Cpe-Chr1:1187564 Cpe03g00140 Cpe-Chr3:707814 3.18E-180 wgd
Cpe01g01118 Cpe-Chr1:6597741 Cpe03g00140 Cpe-Chr3:707814 8.90E-175 wgd
Cpe16g00582 Cpe-Chr16:6587972 Cpe03g00140 Cpe-Chr3:707814 0 wgd
Cpe19g00379 Cpe-Chr19:3404478 Cpe03g00140 Cpe-Chr3:707814 1.06E-162 wgd
Cpe20g00789 Cpe-Chr20:7077959 Cpe03g00140 Cpe-Chr3:707814 0 wgd
Cpe03g00140 Cpe-Chr3:707814 Cpe05g00891 Cpe-Chr5:5902956 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00140 K07195 - csv:101208543 1081.63