Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00155 ATGGAGACTAAGCTTCTGCTTCTTCTTCTTTTCTTTCTTTTCCACGCATGCTTTGCTCAGATGCCAGGGTTTGTAAGTTTGGACTGTGGAGGTCAAGAAAGTTTCACTGACGATATTGGTCTGGAGTGGGTTCCAGATACTCAAATTCGTTTTGGAGAAGCAATTAACATTTCTGTTGCAAATGAGACAAAGAAGCAATATTTGACCTTAAGACACTTCCCTGCTGATTCCAGGAAGTACTGCTACTCACTCAATGTCACTAGTAGAACACGTTACCTTCTCAGAGCAACATTTTTATATGGTAACTTTGACAATAACAACGTGTATCCAAAATTTGATATTTCCCTTGGGGCAACTCACTGGTCAACAATTGTCATATCTGATGCCAACACTATAGAAGTTCGAGAGCTTATATTTCTGGCTTCAACTCCAACAGTAAGCGTCTGTTTGTCAAATGCTACAACTGGGCAGCCATTCATATCCACGCTTGAGCTTCGACAATTTAATGGCTCTACCTACTATACTGAATTTGAGGATCAGTTTTACCTGAGTGTCTCAGCAAGGATTAATTTTGGTGCAGATTCCGAAGCTCCAGTAAGGTATCCTGATGATCCATTTGACCGGATATGGGAGTCGGACTCTCTGAGAAAAGCAAATTACCTTGTTGATGTTGCTGCTGGTACAGAAAAAATTTCCACTAAAATGCCAATAGATGTAGATAGAGATGAAAGGCCACCTCAAAAAGTTATGCAGACGGCTGTAGTCGGAAGAAATGGTTCATTAACTTACCGGTTAAATTTGGATGGTTTCCCTGGCTTTGGATGGGCTGTCACCTACTTCGCGGAAATTGAAGACTTGGGTCCAACTGATACGAGAAAATTCAGGCTTGTACTTCCCGGCATGCCTGATATCAGCAAAGCTGTAGTCAACATTGAAGAAAATGCTCAAGGAAAATATCGGCTTTATGAGCCTGGTTTTACCAACTTAACCTTCCCTTTTGTATTATCTTTTCGGTTTGGGAAAACATCAGATTCTTCGTTGGGACCTCTGTTAAACGCTATGGAGATTAACAAGTACCTTGAAAAAAGTGATGGTTCTCTAGATGGAGCAGCTGTTGCTAGTGTAATTTCAAAATTTTCATCTTCAGATTGGGATGAAGGTGGTGATCCATGCATGCCAGTTCCTTGGTCATGGTTGCAATGTAACTCTGATCCACGGTCAAGAATAGTTAAAATTTCATTGTCCAAAAAGAATTTGACGGGGAGCATCCCTACAGACCTTGCAAAGTTGAGCGGTTTAGTCGAATTATGGCTTGATGGAAATTCGTTCGTAGGTCCTATACCAGACTTTACTGGATGCGCGGACTTAAAAATCCTCCATCTCGAGAACAACCAGTTGACTGGAGAGTTGCCTTCCTCTTTAGCAAATCTACCAAGTTTACGGGAGCTGTATGTTCAGAATAACATGTTATCTGGAACAGTGCCTTCTGGTCTTCTCAATAAAAACCTAGTCATAGACTACTCTGGAAACATCAATCTTCATGAAGGGGGGAAAAAGAACCACGTTTATATCATTGTGGGTTCAGTAATTGGTGCTCTTGTCCTGCTGTTGGCTACTGTGGTATCTTGCTACTTTTTGCAAAAAGGAAGAAAAAGATATCAAGAACAAGATCTACTTGAAGAATCCTTGCCTGTACAAAGATTTGCCTCTTCAAAGGGTGATGCCCCCAAGGAAACCGCACATTGCTTCAGTGTTAATGAAATTGTAGAAGCAACAAGAGATTTTGAAAGAAAAATTGGGTCTGGAGGTTTTGGTGTTGTATACTACGGGAAATTAAATGACGGAAAAGAAATTGCAGTTAAAGTTTTGACTAATAACTCCTTCCAGGGAAAGCGGGAATTTGCGAACGAGGTGACTCTTCTTTCAAGGATTCATCACAGAAATTTGGTACAATTTCTTGGATATTGCCAAGAAGAAGACAGAAGTATGCTTGTCTATGAGTTCATGCATAATGGAACTCTCAAAGAACATCTTTATGGTCCACTAGTACGGGAAAAAACTATCAGTTGGATTAAGCGCCTCGAGATTGCTGAAGATTCTGCAAGAGGGATCGAGTACCTTCATACAGGTTGCATACCAGCAATTATTCATAGAGATCTGAAAAGCAGTAATATTCTCCTTGACAGGCACATGAAAGCAAAGGTTTCAGATTTTGGTCTTTCAAAGCTTGCGGTGGATGGTGTCTCCCACGTGTCCAGCATTGTTCGGGGAACTGTTGGATATTTGGATCCAGAGTATTATATCTCTCAGCAGTTGACAGACAAGAGCGATGTATATAGCTTTGGCGTTATTCTTCTCGAGTTGATATCTGGTCAAGAAGCAATATCTAATGTAAACTTTGGTGTTAATTGCCGCAATATCGTCCAGTGGGCAAAGTTACACATCGAGAGCGGGGACATTCAAGGAATCATCGATCCATCGCTACGCAACGAATATGACATTCAATCGATGTGGAAAATTGCAGAGAAAGCGTTGATGTGTGTCCAGCCACATGGGCACCTGAGGCCATCCATATCTGAAGTGCTGAAGGAGATTCAAGATTCACTTTTGATTGAAAGGGAAGCTACTGCAACTAGAGAAGGTAACTCTGATGATATGTCTAGAAACTCAATCCACTCTTTGAATATGGGATCTCTTGATTTATGTGGAAACGAAAACTACGTGTCGTTTGACGAATCCATGGCTCGACCTACTGCAAGGTAG 2763 41.19 METKLLLLLLFFLFHACFAQMPGFVSLDCGGQESFTDDIGLEWVPDTQIRFGEAINISVANETKKQYLTLRHFPADSRKYCYSLNVTSRTRYLLRATFLYGNFDNNNVYPKFDISLGATHWSTIVISDANTIEVRELIFLASTPTVSVCLSNATTGQPFISTLELRQFNGSTYYTEFEDQFYLSVSARINFGADSEAPVRYPDDPFDRIWESDSLRKANYLVDVAAGTEKISTKMPIDVDRDERPPQKVMQTAVVGRNGSLTYRLNLDGFPGFGWAVTYFAEIEDLGPTDTRKFRLVLPGMPDISKAVVNIEENAQGKYRLYEPGFTNLTFPFVLSFRFGKTSDSSLGPLLNAMEINKYLEKSDGSLDGAAVASVISKFSSSDWDEGGDPCMPVPWSWLQCNSDPRSRIVKISLSKKNLTGSIPTDLAKLSGLVELWLDGNSFVGPIPDFTGCADLKILHLENNQLTGELPSSLANLPSLRELYVQNNMLSGTVPSGLLNKNLVIDYSGNINLHEGGKKNHVYIIVGSVIGALVLLLATVVSCYFLQKGRKRYQEQDLLEESLPVQRFASSKGDAPKETAHCFSVNEIVEATRDFERKIGSGGFGVVYYGKLNDGKEIAVKVLTNNSFQGKREFANEVTLLSRIHHRNLVQFLGYCQEEDRSMLVYEFMHNGTLKEHLYGPLVREKTISWIKRLEIAEDSARGIEYLHTGCIPAIIHRDLKSSNILLDRHMKAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNVNFGVNCRNIVQWAKLHIESGDIQGIIDPSLRNEYDIQSMWKIAEKALMCVQPHGHLRPSISEVLKEIQDSLLIEREATATREGNSDDMSRNSIHSLNMGSLDLCGNENYVSFDESMARPTAR 920
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 780043 786868 + Cp4.1LG03g02130.1 Cpe03g00155 465872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00155 920 SMART serkin_6 593 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00155 920 PANTHER TYROSINE KINASE DOMAIN PROTEIN 11 906 - -
Cpe03g00155 920 ProSitePatterns Protein kinases ATP-binding region signature. 599 621 IPR017441 GO:0005524
Cpe03g00155 920 Pfam Leucine rich repeat 450 490 IPR001611 GO:0005515
Cpe03g00155 920 Gene3D Transferase(Phosphotransferase) domain 1 669 890 - -
Cpe03g00155 920 Gene3D Ribonuclease Inhibitor 371 518 IPR032675 -
Cpe03g00155 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 715 727 IPR008271 GO:0004672|GO:0006468
Cpe03g00155 920 SUPERFAMILY Protein kinase-like (PK-like) 581 865 IPR011009 -
Cpe03g00155 920 Pfam Protein kinase domain 596 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00155 920 Pfam Malectin-like domain 27 357 IPR024788 -
Cpe03g00155 920 Gene3D Phosphorylase Kinase; domain 1 568 668 - -
Cpe03g00155 920 ProSiteProfiles Protein kinase domain profile. 593 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00155 920 PANTHER OS07G0107800 PROTEIN-RELATED 11 906 - -
Cpe03g00155 920 SUPERFAMILY L domain-like 393 500 - -
Cpe03g00155 920 CDD STKc_IRAK 599 866 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00155 Cpe-Chr3:780043 Cpe09g00565 Cpe-Chr9:3899379 0 dispersed
Cpe20g00870 Cpe-Chr20:7825968 Cpe03g00155 Cpe-Chr3:780043 3.34E-69 dispersed
Cpe17g00955 Cpe-Chr17:7305554 Cpe03g00155 Cpe-Chr3:780043 1.56E-128 transposed
Cpe17g01101 Cpe-Chr17:8356990 Cpe03g00155 Cpe-Chr3:780043 2.36E-134 transposed
Cpe03g00155 Cpe-Chr3:780043 Cpe08g01125 Cpe-Chr8:8446306 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62268 PF12819 Malectin_like 6.30E-78 CL0202 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00155 - - csv:101212456 1741.47