Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00171 ATGTTGAATTTCTCTCCCATTTCCTCTGTAATTTCCTTCACAATACTTCTTTTTTCCTTTTCCAGTACTGCCTTTTTCGATTTCTCTACCACCGCCGTCTCCGCCGCCGAATTTGACTTCGGAACCGTCGCCCTCAGCAGTTTAAAGCTTATCGGCGATGCCCACTTGAACAATGGGAGCGTCAGACTTACACGAGACCTCGCCGTCCCAAATTCAGGCGCCGGGAGAGTCCTCTACGCCAAACCCATCAGATTCCGGCAGCCGGGGATTAGTTATCTCGCCAGTTTCTCCACATTTTTTTCTTTCTCCATCACTAATCTCAACCCGTCGTCGATCGGTGGCGGTTTGGCGTTTCTAATCTCGCCCGACGATGACACGCTCGGCGGCGCCGGTGGGTTTTTGGGGCTGGCCGACGATAGGGGATTGGGATTCGTGGCGGTGGAATTCGACACGTTGATGGATGTCGAATTTAAGGACATTAATGGGAACCATGTCGGATTGGATCTGAACGACATGGTTTCGTTGCAGGTTAAAGATCTGGACGGAATTGGAATCGATCTCAAAAGTGGGGATACGGTAAATTCGTGGATCGAATACGACGGGTCGGCTCGGATCTTCAAAATCTTCGTTTCGTATTCGAATTTGAAACCGACAGAACCCCTGATGTCGTTCAATCTCGATCTCGACCCGTATTTGAACGATTTTATGTACGTCGGATTTTCCGGTTCCACACAGGGGAGTACGGAAGTTCACAGTGTGGACTGGTGGAGCTTTACGTCGTCGTTTGACTCGAATTCCCCACCCGGGTCGGTTCCGCCGCCGCCAACGACGACGCTGATGAACCCAACGGCGAATGTCGTCCGGTCAACGCCGCCGTCACAACCTCCGTCGGGTTCAGATTCCAACACCCAAAAGAATACCAACTCTCCATCCTGCCACAATGGACTATGCAAGCAAGGTGCCGGCGCGGTGGTTGGAGTTGTGACGGCGGGGGCGTTTGTTCTAGCATTATTCGCCGGCGGGTTGATTTGGGTATACTCCAAAAAGATTAAGCGGGTTAAAAAATCGGACTCCCTCGCTTCAGAAATCATCAAAACGCCTAAGGAATTCACTTACAAGGAGCTCAAAATCGCCACCAAAGGCTTCAGCTCGAACAGAATCATTGGCCATGGCGCTTTTGGGACTGTTTATAAAGGGATTCTGCCGGAGACCGGCGACATTGTGGCGGTGAAACGGTGTAGCCATACTACACAGGGGAAAAATGAATTCCTCTCTGAACTTTCTATCATCGGAACTCTCCGCCACCGGAATTTGGTCCGTCTTCAAGGATGGTGTCACGAGAAAGGCGAAATTTTACTCGTTTACGATTTAATGCCAAATGGGAGACGGCTGTTGGCGGCGGCCGATGGGAGACTCGGCGGGGAGTTTGAGGAATCAGAGATGAGGAAAGTTTTGTTAGTTGGGTTGGCTTGTTCTCACCCGGATCCGATGACCCGACCCACAATGAGAGGCGTAGTGCAAATGTTAATCGGCGATTCTGAGATTCCGATCGTCCCTCGGTCTAAGCCATCGACAAGCTTCAGTACCGCTCATTTGCTTCTCACTTTACAAGATAGCGTGTCCGATCTGAACGATATGATCGCCATTTCCACTTCCTCGTCTGACCACAGCTTCAAGGGCGAGGATTCGATCTCACTGGAGGATCGGACGGCGGGAAGTCCATCAATTGTTTGA 1734 50.98 MLNFSPISSVISFTILLFSFSSTAFFDFSTTAVSAAEFDFGTVALSSLKLIGDAHLNNGSVRLTRDLAVPNSGAGRVLYAKPIRFRQPGISYLASFSTFFSFSITNLNPSSIGGGLAFLISPDDDTLGGAGGFLGLADDRGLGFVAVEFDTLMDVEFKDINGNHVGLDLNDMVSLQVKDLDGIGIDLKSGDTVNSWIEYDGSARIFKIFVSYSNLKPTEPLMSFNLDLDPYLNDFMYVGFSGSTQGSTEVHSVDWWSFTSSFDSNSPPGSVPPPPTTTLMNPTANVVRSTPPSQPPSGSDSNTQKNTNSPSCHNGLCKQGAGAVVGVVTAGAFVLALFAGGLIWVYSKKIKRVKKSDSLASEIIKTPKEFTYKELKIATKGFSSNRIIGHGAFGTVYKGILPETGDIVAVKRCSHTTQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGRRLLAAADGRLGGEFEESEMRKVLLVGLACSHPDPMTRPTMRGVVQMLIGDSEIPIVPRSKPSTSFSTAHLLLTLQDSVSDLNDMIAISTSSSDHSFKGEDSISLEDRTAGSPSIV 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 847888 850056 - Cp4.1LG03g01820.1 Cpe03g00171 465888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00171 577 Pfam Legume lectin domain 38 265 IPR001220 GO:0030246
Cpe03g00171 577 SUPERFAMILY Protein kinase-like (PK-like) 364 461 IPR011009 -
Cpe03g00171 577 MobiDBLite consensus disorder prediction 553 577 - -
Cpe03g00171 577 Pfam Protein kinase domain 383 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00171 577 ProSitePatterns Protein kinases ATP-binding region signature. 388 411 IPR017441 GO:0005524
Cpe03g00171 577 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 463 557 - -
Cpe03g00171 577 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 27 461 - -
Cpe03g00171 577 Gene3D - 34 269 - -
Cpe03g00171 577 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 271 IPR013320 -
Cpe03g00171 577 ProSiteProfiles Protein kinase domain profile. 382 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00171 577 PANTHER - 463 557 - -
Cpe03g00171 577 ProSitePatterns Legume lectins beta-chain signature. 145 151 IPR019825 -
Cpe03g00171 577 Gene3D Phosphorylase Kinase; domain 1 344 457 - -
Cpe03g00171 577 CDD lectin_legume_LecRK_Arcelin_ConA 37 262 IPR001220 GO:0030246
Cpe03g00171 577 PANTHER - 27 461 - -
Cpe03g00171 577 MobiDBLite consensus disorder prediction 280 311 - -
Cpe03g00171 577 MobiDBLite consensus disorder prediction 262 311 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00171 Cpe08g01106 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00171 Cpe-Chr3:847888 Cpe03g00101 Cpe-Chr3:521855 3.08E-69 dispersed
Cpe14g00785 Cpe-Chr14:6191249 Cpe03g00171 Cpe-Chr3:847888 4.38E-50 transposed
Cpe03g00171 Cpe-Chr3:847888 Cpe08g01106 Cpe-Chr8:8361728 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62269 PF00139 Lectin_legB 2.60E-56 CL0004 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00171 - - bhj:120091585 764.607