Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00172 ATGGCGGCCAAGAACCATTTGAGCCTTCTTCTTCTCCTCCTTCTGCAGCTGTTTTATTCAGGAAGGGGCGAACTGCAAATTAATTATTATGCTAAAAGTTGCCCAAAAGCTGAAGAAATTATAAAACAGCAAGTTGCCGATCTCTACTATGAACATGGAAACACTGCCGTTTCGTGGCTTAGAAATCTCTTCCATGATTGCATTGTTAAGTCTTGTGATGCATCTATGCTGTTGGAAACGGTGACGGGAGTGGAATCAGAGAAGGATTCAGAGCGAAGTTTTGGGATGAGAAATTTCAAATACGTAAATAAGATCAAAGCTGCTGTTGAACAAGAATGCCCTCTCACTGTATCTTGTGCTGACATTGTTGCGCTATCGGCTCAATATGGCATAGTCATGCTAAAAGGGCCTGAAATTGAGTTGAAAACAGGGAGAAGAGACAGCAAAGTGAGCTATTCCCATCTTGTTGAAGCGTTTGTTCCCAGGCACAATGAATCTCTTGTAAATGTTCTCTCCCTCTTTAGCTCCATCGGCATTGATACCGAAGCAGCCGTCGCTCTTTTAGGAGCTCACTCGGTCGGGCGAGTTCACTGTGTGAACTTAGTGGAGAGGCTATATCCAAGCGTGGATCCAACCCTCGATCCCGAATACGCGAAATACTTGAAAGGTCGATGCCCGACACCAAATCCAGACCCGAAAGCAGTATTGTATTCGAGAAATGATCGGGAGACGCCAATGATTCTGGATAATATGTACTACAGTAATATACTGAACCATAAAGGGTTGCTCATAGTGGACCAAGAATTGGCTTCTAATCCTCTTACGCTTACCTACGTCAAGAAATTTGCAGCTGATAATCAATATTTCCATGCCCAATTCTCAAGGGGAATTCGTTTGTTGTCGGAAAACAATCCCCTCACCGGAGATGAAGGAGAGATTAGGAAAGATTGTCGCTTTGTTAATTAA 966 43.37 MAAKNHLSLLLLLLLQLFYSGRGELQINYYAKSCPKAEEIIKQQVADLYYEHGNTAVSWLRNLFHDCIVKSCDASMLLETVTGVESEKDSERSFGMRNFKYVNKIKAAVEQECPLTVSCADIVALSAQYGIVMLKGPEIELKTGRRDSKVSYSHLVEAFVPRHNESLVNVLSLFSSIGIDTEAAVALLGAHSVGRVHCVNLVERLYPSVDPTLDPEYAKYLKGRCPTPNPDPKAVLYSRNDRETPMILDNMYYSNILNHKGLLIVDQELASNPLTLTYVKKFAADNQYFHAQFSRGIRLLSENNPLTGDEGEIRKDCRFVN 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 851765 853239 - Cp4.1LG03g01810.1 Cpe03g00172 465889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00172 321 SUPERFAMILY Heme-dependent peroxidases 24 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 PANTHER PEROXIDASE 25-RELATED 13 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 Gene3D Peroxidase, domain 2 161 300 - -
Cpe03g00172 321 Gene3D - 28 321 - -
Cpe03g00172 321 PANTHER PEROXIDASE 21 13 319 - -
Cpe03g00172 321 Pfam Peroxidase 42 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 ProSiteProfiles Plant heme peroxidase family profile. 24 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe03g00172 321 CDD secretory_peroxidase 24 320 IPR033905 GO:0004601|GO:0042744
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00172 Cpe08g01105 CCT
Cpe03g00172 Cpe10g00207 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00172 Cpe-Chr3:851765 Cpe05g01450 Cpe-Chr5:10105551 9.35E-59 dispersed
Cpe20g00365 Cpe-Chr20:2054530 Cpe03g00172 Cpe-Chr3:851765 4.26E-110 transposed
Cpe10g00207 Cpe-Chr10:1192530 Cpe03g00172 Cpe-Chr3:851765 7.17E-148 wgd
Cpe03g00172 Cpe-Chr3:851765 Cpe08g01105 Cpe-Chr8:8357747 1.04E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00172 K00430 - csv:101215428 558.525