Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00178 ATGGCCAAGGCAGTCACCAATTTGAGCTCCTGGATCGAGGTCGCTCCTCCGCCTCTTATTTCTCCTTCCAAAACCTCCAATTCTCCTCGCTTGGAGACTATTGCTGAAGACGATTCCGAAGATTGCGATTACGAATTTATGGCTTGTTTGATTTCTAAGAGGAGTAAGGCTCCATCAGCCGAAGGTACATGCCTCATGGCTTTTGTGGAGGTTGAAAGAGAGAATATGGCAACTAGGGGTCAAGGTGGTATCCAACAATTGCTTGCTGCAGAGCAAGAAGCTCAACACATTGTCAATGCTGCCAGAAATGCAAAATTGGCTAGACTGAAACAAGCCAAAGAAGAGGCTGAAAGGGAAATTGCTGCATATCGAGCCCAAGTCGAGTCTGAATTCCAAAGAAAACTCACTGAGAGTAGCGGAGATTCGGGAGCTAATGTTAAGCGGCTCGAAGTTGAGACAGACATAAAGATTCAAAACCTGAAAGAAGAGTCTGCTAGAATTTCACACGATGTTGTGAACATGCTCCTGAAGCATGTGACAACCGTGAAAAATTGA 555 45.23 MAKAVTNLSSWIEVAPPPLISPSKTSNSPRLETIAEDDSEDCDYEFMACLISKRSKAPSAEGTCLMAFVEVERENMATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKLTESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 880470 885422 - Cp4.1LG03g01890.1 Cpe03g00178 465895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00178 184 Coils Coil 99 133 - -
Cpe03g00178 184 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 77 184 - -
Cpe03g00178 184 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 77 184 IPR005124 GO:0016471|GO:0046961|GO:1902600
Cpe03g00178 184 Gene3D - 74 184 - -
Cpe03g00178 184 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 76 183 IPR005124 GO:0016471|GO:0046961|GO:1902600
Cpe03g00178 184 Pfam Vacuolar (H+)-ATPase G subunit 81 183 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00178 Cpe08g01100 CCT
Cpe03g00178 Cpe08g01100 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00110 Cpe-Chr11:624237 Cpe03g00178 Cpe-Chr3:880470 3.49E-13 transposed
Cpe03g00178 Cpe-Chr3:880470 Cpe08g01100 Cpe-Chr8:8328811 1.08E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00178 K02152 - cmos:111461062 184.111