Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g00178 | ATGGCCAAGGCAGTCACCAATTTGAGCTCCTGGATCGAGGTCGCTCCTCCGCCTCTTATTTCTCCTTCCAAAACCTCCAATTCTCCTCGCTTGGAGACTATTGCTGAAGACGATTCCGAAGATTGCGATTACGAATTTATGGCTTGTTTGATTTCTAAGAGGAGTAAGGCTCCATCAGCCGAAGGTACATGCCTCATGGCTTTTGTGGAGGTTGAAAGAGAGAATATGGCAACTAGGGGTCAAGGTGGTATCCAACAATTGCTTGCTGCAGAGCAAGAAGCTCAACACATTGTCAATGCTGCCAGAAATGCAAAATTGGCTAGACTGAAACAAGCCAAAGAAGAGGCTGAAAGGGAAATTGCTGCATATCGAGCCCAAGTCGAGTCTGAATTCCAAAGAAAACTCACTGAGAGTAGCGGAGATTCGGGAGCTAATGTTAAGCGGCTCGAAGTTGAGACAGACATAAAGATTCAAAACCTGAAAGAAGAGTCTGCTAGAATTTCACACGATGTTGTGAACATGCTCCTGAAGCATGTGACAACCGTGAAAAATTGA | 555 | 45.23 | MAKAVTNLSSWIEVAPPPLISPSKTSNSPRLETIAEDDSEDCDYEFMACLISKRSKAPSAEGTCLMAFVEVERENMATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKLTESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN | 184 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 880470 | 885422 | - | Cp4.1LG03g01890.1 | Cpe03g00178 | 465895 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g00178 | 184 | Coils | Coil | 99 | 133 | - | - | |
Cpe03g00178 | 184 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT G1 | 77 | 184 | - | - | |
Cpe03g00178 | 184 | PANTHER | VACUOLAR ATP SYNTHASE SUBUNIT G | 77 | 184 | IPR005124 | GO:0016471|GO:0046961|GO:1902600 | |
Cpe03g00178 | 184 | Gene3D | - | 74 | 184 | - | - | |
Cpe03g00178 | 184 | TIGRFAM | V_ATP_synt_G: V-type ATPase, G subunit | 76 | 183 | IPR005124 | GO:0016471|GO:0046961|GO:1902600 | |
Cpe03g00178 | 184 | Pfam | Vacuolar (H+)-ATPase G subunit | 81 | 183 | IPR005124 | GO:0016471|GO:0046961|GO:1902600 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g00178 | Cpe08g01100 | CCT | |
Cpe03g00178 | Cpe08g01100 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00110 | Cpe-Chr11:624237 | Cpe03g00178 | Cpe-Chr3:880470 | 3.49E-13 | transposed | |
Cpe03g00178 | Cpe-Chr3:880470 | Cpe08g01100 | Cpe-Chr8:8328811 | 1.08E-68 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g00178 | K02152 | - | cmos:111461062 | 184.111 |