Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00205 ATGCCGTTCCAGAGGATAGTAATCGCCGTCGGCCGGCCGGAGGAGGCCACCCATCCCGCCGCCCTGAAGGCCGCCTTGGCCGAGTTCATTTCCACTCTAATCTTTGTTTTCGCTGGCCAAGGTTCGGGTCTTGCTTTCTCTAAACTCACCCATAATTCTCCCACCTCCCCTGCTGCTCTCATCATCGCTTCCTTAGCTCATGGCTTTGCCCTTTTCGTCGGAGTCTCCACCGGCGCCAACATCTCCGGCGGCCACCTCAACCCCGCCGTCACTTTCGGAGCCTTAGTAGGCGGAAATATCACCCTCCTCCGCGGCATTCTCTACTGGATAGCCCAGCTCCTCGGCGCTCTTGTCGCTAACTTGTTGCTTAAATTCGTCATCACGGACGTAGTAATTTCTGGATTCTCGCTGTCAGCAGGGGTGGGAGTGTGGGAGGCGCTCGTATTCGAGATCGTAATGACATTCGGATTAGTGTACACAGTTTACGCCACCGCCATCGACCCCAAAAAGGGTGAGTTGGGAGTGATAGCACCCATCGCCATCGGTTTCATAGTGGCCGCCAACATTCTGGTGGGCGGCCCATTCACCGGCGCTTCCATGAACCCGGCCGTGGCATTCGGACCCGCCGTCGTGGCTGGGTCTTGGGCCCAGCACTGGATCTACTGGGCCGGCCCACTGATTGGCGGCGGCTTGGCTGGCATTGTCTATGAGCTGTTCTTCATTGGGTTCACCCATGAGCCCCTCCCCGCCGCGGAGTACTAA 762 58.27 MPFQRIVIAVGRPEEATHPAALKAALAEFISTLIFVFAGQGSGLAFSKLTHNSPTSPAALIIASLAHGFALFVGVSTGANISGGHLNPAVTFGALVGGNITLLRGILYWIAQLLGALVANLLLKFVITDVVISGFSLSAGVGVWEALVFEIVMTFGLVYTVYATAIDPKKGELGVIAPIAIGFIVAANILVGGPFTGASMNPAVAFGPAVVAGSWAQHWIYWAGPLIGGGLAGIVYELFFIGFTHEPLPAAEY 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1022954 1025757 - Cp4.1LG03g01390.1 Cpe03g00205 465922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00205 253 PANTHER AQUAPORIN-8 7 252 IPR034294 -
Cpe03g00205 253 ProSitePatterns MIP family signature. 85 93 IPR022357 -
Cpe03g00205 253 PRINTS Major intrinsic protein family signature 23 42 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe03g00205 253 PRINTS Major intrinsic protein family signature 67 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe03g00205 253 PRINTS Major intrinsic protein family signature 104 123 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe03g00205 253 PRINTS Major intrinsic protein family signature 149 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe03g00205 253 PRINTS Major intrinsic protein family signature 182 204 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe03g00205 253 PRINTS Major intrinsic protein family signature 219 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe03g00205 253 CDD MIP 23 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe03g00205 253 Pfam Major intrinsic protein 16 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe03g00205 253 SUPERFAMILY Aquaporin-like 15 248 IPR023271 -
Cpe03g00205 253 PANTHER AQUAPORIN TIP1-1 7 252 - -
Cpe03g00205 253 Gene3D Glycerol uptake facilitator protein. 6 248 IPR023271 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00205 Cpe10g00246 CCT
Cpe03g00205 Cpe19g00437 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00205 Cpe-Chr3:1022954 Cpe17g00544 Cpe-Chr17:4517086 5.15E-95 dispersed
Cpe16g00292 Cpe-Chr16:4908103 Cpe03g00205 Cpe-Chr3:1022954 9.37E-22 transposed
Cpe10g00246 Cpe-Chr10:1431950 Cpe03g00205 Cpe-Chr3:1022954 2.05E-127 wgd
Cpe19g00437 Cpe-Chr19:3899285 Cpe03g00205 Cpe-Chr3:1022954 1.07E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00205 K09873 - csv:101222386 426.402