Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g00205 | ATGCCGTTCCAGAGGATAGTAATCGCCGTCGGCCGGCCGGAGGAGGCCACCCATCCCGCCGCCCTGAAGGCCGCCTTGGCCGAGTTCATTTCCACTCTAATCTTTGTTTTCGCTGGCCAAGGTTCGGGTCTTGCTTTCTCTAAACTCACCCATAATTCTCCCACCTCCCCTGCTGCTCTCATCATCGCTTCCTTAGCTCATGGCTTTGCCCTTTTCGTCGGAGTCTCCACCGGCGCCAACATCTCCGGCGGCCACCTCAACCCCGCCGTCACTTTCGGAGCCTTAGTAGGCGGAAATATCACCCTCCTCCGCGGCATTCTCTACTGGATAGCCCAGCTCCTCGGCGCTCTTGTCGCTAACTTGTTGCTTAAATTCGTCATCACGGACGTAGTAATTTCTGGATTCTCGCTGTCAGCAGGGGTGGGAGTGTGGGAGGCGCTCGTATTCGAGATCGTAATGACATTCGGATTAGTGTACACAGTTTACGCCACCGCCATCGACCCCAAAAAGGGTGAGTTGGGAGTGATAGCACCCATCGCCATCGGTTTCATAGTGGCCGCCAACATTCTGGTGGGCGGCCCATTCACCGGCGCTTCCATGAACCCGGCCGTGGCATTCGGACCCGCCGTCGTGGCTGGGTCTTGGGCCCAGCACTGGATCTACTGGGCCGGCCCACTGATTGGCGGCGGCTTGGCTGGCATTGTCTATGAGCTGTTCTTCATTGGGTTCACCCATGAGCCCCTCCCCGCCGCGGAGTACTAA | 762 | 58.27 | MPFQRIVIAVGRPEEATHPAALKAALAEFISTLIFVFAGQGSGLAFSKLTHNSPTSPAALIIASLAHGFALFVGVSTGANISGGHLNPAVTFGALVGGNITLLRGILYWIAQLLGALVANLLLKFVITDVVISGFSLSAGVGVWEALVFEIVMTFGLVYTVYATAIDPKKGELGVIAPIAIGFIVAANILVGGPFTGASMNPAVAFGPAVVAGSWAQHWIYWAGPLIGGGLAGIVYELFFIGFTHEPLPAAEY | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1022954 | 1025757 | - | Cp4.1LG03g01390.1 | Cpe03g00205 | 465922 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g00205 | 253 | PANTHER | AQUAPORIN-8 | 7 | 252 | IPR034294 | - | |
Cpe03g00205 | 253 | ProSitePatterns | MIP family signature. | 85 | 93 | IPR022357 | - | |
Cpe03g00205 | 253 | PRINTS | Major intrinsic protein family signature | 23 | 42 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe03g00205 | 253 | PRINTS | Major intrinsic protein family signature | 67 | 91 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe03g00205 | 253 | PRINTS | Major intrinsic protein family signature | 104 | 123 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe03g00205 | 253 | PRINTS | Major intrinsic protein family signature | 149 | 167 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe03g00205 | 253 | PRINTS | Major intrinsic protein family signature | 182 | 204 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe03g00205 | 253 | PRINTS | Major intrinsic protein family signature | 219 | 239 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe03g00205 | 253 | CDD | MIP | 23 | 239 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe03g00205 | 253 | Pfam | Major intrinsic protein | 16 | 236 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe03g00205 | 253 | SUPERFAMILY | Aquaporin-like | 15 | 248 | IPR023271 | - | |
Cpe03g00205 | 253 | PANTHER | AQUAPORIN TIP1-1 | 7 | 252 | - | - | |
Cpe03g00205 | 253 | Gene3D | Glycerol uptake facilitator protein. | 6 | 248 | IPR023271 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g00205 | Cpe10g00246 | CCT | |
Cpe03g00205 | Cpe19g00437 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00205 | Cpe-Chr3:1022954 | Cpe17g00544 | Cpe-Chr17:4517086 | 5.15E-95 | dispersed | |
Cpe16g00292 | Cpe-Chr16:4908103 | Cpe03g00205 | Cpe-Chr3:1022954 | 9.37E-22 | transposed | |
Cpe10g00246 | Cpe-Chr10:1431950 | Cpe03g00205 | Cpe-Chr3:1022954 | 2.05E-127 | wgd | |
Cpe19g00437 | Cpe-Chr19:3899285 | Cpe03g00205 | Cpe-Chr3:1022954 | 1.07E-110 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g00205 | K09873 | - | csv:101222386 | 426.402 |