Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00217 ATGTTCAAGTTTTGGGGATCTCAAGAGGAACAGGTGCGTCCTCCACAAGATGTTACCACACAGTCATGGTATCCACCCTCTGTTAGCTCCTCTCGCCCTGCAACCCCAGGTAGCACCTCCTCCAATCATTCCAGTCCACAAAGGCTTTCTGGTAGGCCACAGTCTCCATCACACGTTTCCCCTGCTGAAGCTGCCGGCATTATTTCTGCTTTGAAGGACAAAAGTGTTGATGAGTTGCGAAAGCTTTTGTCAGACAAGGATGCATATAATCAGTTCCTCCTTTCACTTGACCAGATCAAAACTCAGAACAATCTAAAAGATGAGCTGCGCAAGGAAACTCTTCAGCTTGCTAGTGAGAACTTGGAAAAGGAACCATGCATCATGGAACTCAGAAACCAGTGCAGAATTATTCGGACAACGGAACTGGCAGCGGCCGAGGAGAAGCTAAACGAGCTTGACCGAAAGAAAGAGGACATTATGAAGCTCTGTTCTCCTGCTTCACTTCTCAAAAGGCTTCAAGAGAGAATGAAAGAGACAGAAGAGGAGTCGGAGAAGGTGCACATGCAGCTCCTTGAGAGAGAGATAGATTTGAGTTCATTTACTCATAAATACAAGAAGCTGCGTATGAATTACCACCGGCGAGCTCTCATTCAACTTGCTGCCAGAACCACCTGA 675 46.81 MFKFWGSQEEQVRPPQDVTTQSWYPPSVSSSRPATPGSTSSNHSSPQRLSGRPQSPSHVSPAEAAGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKTQNNLKDELRKETLQLASENLEKEPCIMELRNQCRIIRTTELAAAEEKLNELDRKKEDIMKLCSPASLLKRLQERMKETEEESEKVHMQLLEREIDLSSFTHKYKKLRMNYHRRALIQLAARTT 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1085775 1089746 + Cp4.1LG03g01560.1 Cpe03g00217 465934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00217 224 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37A 3 223 - -
Cpe03g00217 224 SUPERFAMILY Endosomal sorting complex assembly domain 161 214 IPR037202 -
Cpe03g00217 224 Gene3D Helix hairpin bin 151 219 IPR029012 -
Cpe03g00217 224 Coils Coil 102 122 - -
Cpe03g00217 224 Coils Coil 142 162 - -
Cpe03g00217 224 ProSiteProfiles VPS37 C-terminal domain profile. 146 224 IPR009851 -
Cpe03g00217 224 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 3 223 - -
Cpe03g00217 224 MobiDBLite consensus disorder prediction 12 57 - -
Cpe03g00217 224 Pfam Modifier of rudimentary (Mod(r)) protein 72 216 IPR009851 -
Cpe03g00217 224 Coils Coil 169 189 - -
Cpe03g00217 224 MobiDBLite consensus disorder prediction 1 61 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00217 Cpe08g01065 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00217 Cpe-Chr3:1085775 Cpe08g01065 Cpe-Chr8:8107943 2.24E-140 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00217 K12185 - csv:101204280 378.252